Deb-A
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\DebA using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
JBrowse - Visual display of RNA-Seq signals
View Dmel\DebA in JBrowsePlease Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Annotation CG17967 eliminated in release 5.1 of the genome annotation; no EST or cDNA support for transcription from this strand in this region; putative polypeptide not conserved in closely related Drosophila species (D. simulans, D. erecta).
Sequence analysis of the flanking upstream region of DebA reveals the presence of a kay Jra binding site. Transient expression assay of Adh expression driven by DebA promoter fragment is used to identify a negative regulatory element region from -395 to -442, sequences are required for transcriptional activity.
DebA has been characterized and expression patterns studied.
