FB2025_01 , released February 20, 2025
Transcript: Dmel\Vps13-RA
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General Information
Symbol
Dmel\Vps13-RA
Species
D. melanogaster
Annotation Symbol
CG2093-RA
FlyBase ID
FBtr0088910
Feature type
Associated gene
Evidence Rank
Length (nt)
10364
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 23 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          TTAGTTTCGGGCGAGCATTTAAAGAACGCGCATCGCACGGAGTTACTACTTTTTTGTCGCGTGGAAATGCCGCTGATCAA
          CTATAGACCGCACAGCGAACGCCAGATTGTTTGAAGCACTCACCACGACCACATCAATTGGAATAACAACCACAAACTTG
          GAGGAAAATCAATAGGAGCATCTGCTAGGACACAATGGTCTTCGAGGCGGTGGTGGCCGATGTGCTGAACAAGGTGCTCG
          GCGACTACATCGAGAACTTGGACCGGAACCAGCTGAAGATTGGCATTTGGGGAGGCGATGTCGTCTTGCAGAACCTCAAG
          ATACGGGAGAATGCCCTGGACGAGTTGGACCTGCCCGTACAGCTTATCTATGGTTACTTGGGCAAACTAGTGCTTAAGAT
          CCCCTGGAAGAATTTGTACAGCCAGCCGGTAATTGTCAACATTGAGGATCTTTATGTCTTAGTTTCACCCAACAACAATG
          TCCAGTACAACGCCGAAAAGGAGGCCAAATATGAGATGGACCTCAAGAAGGCGGCGCTTGATGCCCTGGAGGCAGCTCGC
          AAAAAGGAGTTGGAAATGGATCAGCCCAAAGCAGATGCAGGATTTGCCGAAAAGCTAACGGCGCAGATCGTTAACAATCT
          GCAGGTGCAGATAACCAACGTTCATCTGCGATACGAGGATACCACAACGACGGGTAGTCCCTTCTCCTTCGGCATATCCC
          TGCATGAGCTCGAACTTTACACCACCGATTGCGACTGGGAGAAGTGCTACATGGCCCAGCAGGCGTCGCAGGTCTTCAAA
          ATAGCGAATCTCTCATGTCTTTCCGCCTATTTGAACTGTGGTGGACAACTGTACGCGAACAACAAGAGCGACCTTTCACA
          GCAGTTCAAGACGAATATTGCTTGCAAGGAAACAAAACCCAACTACAACTATGTGCTGGGTCCTATCTCTTGCAATGCCA
          AGCTAAAGCTAAACATGAACCCGGAGCTCGATGATCCGCCATTTGAAAAACCTAAAATCGATCTTACGCTGGAAATGGAA
          AAGCTTAATGTCGGCTTGACAAACACACAGTTCGACAATCTCATGAAGCTTGGAGACGCTATGAACCGCCAGCAGTTGGG
          CATACCGTACCGGAAATATCGTCCCTACAATATACCATACAAAGGCCACGCCAGGGACTGGTGGCACTTTGCAATAACTT
          CTATTCTAGAGGAGGAAGTAAGGAAACCCAGAGAGAGCTGGACTTGGGGACACATCAAGACCCACAGAGAACGCTGCAAC
          ACTTATGCACAGAAATACAAGGAGCAGTGCTTAAGCAAAAAACCGTCAGCCGTGCTTACGGAAACCTGCCGTTTGCTAGA
          AACGGAGCTGGACGTTTTTAACTTGCTGCTAATCCGGCAGAGGGTCAACATCGAGATAGCCAAGCAACGAGAGGCAGTGC
          CTGAACAAAAGTCGGGCTGGTTCAGTGGTTGGGGATGGGGCGGCGGAGCCAAGAAGGATGACCAAACCACCAGTCAAAAA
          CTTGTTGAGAAGTTTGAAGCGGCAATGACCAGTGAAGAGAAAGAGAAGATGTACAGAGCTATTGGTTACCAAGAGAACGC
          CAAGCCCACAGACCTTCCAGAGAGCTACGAGGCCATCAGGATGAACTTTAAACTGATAGCCTTAGAGGTCGGCCTTTACA
          AGGATGAGCGTAATAGTTCCGCGGCAACGAAGGACTTCCATGAGCTGCCGTCGCTGGTCCTTCTTAACTTTTCTATGGCC
          ACCGCGTTGATCACCCAACGGCCAGCTGCCGAAGCCATCAGCATTATTGCTGGCATGAGAGAAATCAAGGTAACTGGTCT
          CACGCGCAACGATTACACGCCTTTATTGGTTGAGTCAAAAATCACCGACGAGTTCAACCTGCTGGAAGTGTTTTTCGAGA
          CAAACCCACTGGACAAGTTGTGCGACCAGCGAGTGAAGGTTGTGGCGCGCCCGTTGCAGATAACGTATGATGCGCCAACC
          ATATTGGCCCTGATAAACGCATTCCAGACGCCTGGCGATGTCACGCTCTCCAAGTTTGAGGATGCTGCCAGCACGAAAAT
          CTCGAACTTCAAGGAGCGTTCAGCCACTGGAATGCAGTACATGATCGACAAGAAGGCAGTGCTGGATGTGGACATCCTGT
          TAATGCCAAACATCCTGGTCGTACCACATAAAGGAGTCTACGATGCGGGCAACGTATCCCTGCTAGTAGTTAGCATGGGC
          CAGGTGCACCTCTCCAGCCAACCGCGTAGGGAGTCGAACAAGCTGCAGCATCTTTTCTCAGCCGGCGAGGATAAGGATGA
          GATCCTCAAGACGGTAATGGAAAATGCTTATGACAGGTTTACAGTCGCAGTTGACGATGTGCAGATGCTGGTCGTGCGAG
          CTGGAGAGCCGTGGCAAAATGCGCTAGCGGAGGCAAACTCAACGGAGATGCACGTTTTGCGCCCCGTCTCCCTAAAAGTA
          ACTGCCGCACTATGTGTGGTTGACAATGATCCGCGTCTTCCAAATATTAAAGTGGACATCGACTTGCCTGCGATCCTAGT
          TAATGTCTCAGAGGATCGCATTTTCCTCGCCATAAAGGTGGCAACAAGTATTCCCCTGCCGGAGCAAAAGGAACCGGCTA
          GTAGACTCACACAGACGAACTCGCGCAGCTCAATGTCCATATCCAATTTCATCAACAAGGAAGTGAAAAAGATTGGGCCT
          TCGGCATCGGGGAGCTCTGCCAGTAAGGATCCGTTGCTGGACGAGATCATTCAGTACACCAGTCTCGATGTAAATTTTTC
          TCTTGGAGAAATCAACTTCGTTTTGTTCCAGTCCAGTAGAAAATGCGAGACAAGCCCCGATGTTTCTATTGAATTTCTGA
          CTCCTGATGGTGATGTCCTTCCTTCTCAGTTGACTGAGAATATCCAGGAGCCTATTGAAGAGCTACCCCCAACGCCACCT
          CAGCAGATTCTCTCAATCGACATTCGACGCCTGGAGGCCCACTTTGTGTCCAAAACCTATGAATCGGTGGCCACAGTCAA
          ACTTGGAGATATCAACCTGCGACAGTATGACTGCCAGGACAGTGACATGGATGTACTAGATGTTATCTATACGCCGAAAC
          AGGAGAATAGTTCCAATTACCTGTTCACCGTCTCGTGCACAATTGCAGACAAGTCGTCGCCAGAGTTCAGCACCAAGTAC
          AACTCCACTGAACAGTTGGTCGTGGCTAACTTCGAGGTACTTCAAATCGTGCTGCACCAGGAATGCCTACAAAGGATTAT
          GGAGGTCGTAAACAATTTCCAAAGAAACCTAGATCTTGTACTATCAAGTACCCGACCACGGGATCGGATGGGCTCCATTG
          GGGGAGGAGATGGCATTAAACGTACGCTTAATGTTATTCTTGAGGACACAGAGGAAATAATGACCACCGACCAGATGAAG
          CGGCGAAAGAAGACGCGCCGCACTCACGTCGTAGAGACGGTGAAAGTTCGTGTTATCGCTAATTTGGATCAAGTGGGTCT
          GGTGCTGACCGGCCGAAAGCGGCCGATAGCAGAGATGAATGTGAAGAAATTCGTGTCCAGTCTGATCATAAAGTCGTCCT
          ACACGGAAGTCAACATTGGCCTTAAAGACATTCAGGTGTTGGACCTAAATCCTTACACTATTCACAAGAATATTCTGAGT
          ATTGTTGGCAAGGACGCTTTCAACTGCCAGATTGTGATCTACAACAAGGAGGAGACCCAAGACTACAACTCTGATGATAT
          GAAAATAACCGTGGACATTGGCTGCATGAAGATCATCTTCCTCAATTGGTTTGTGGCAGGTGTTATGAACTTCTTAAACA
          ACTTCACAGCGGCCCAAGCAACCATATCGCAGGCTGGTGCTGCGGCTGCCGAGTCCGCTCGCCAGAAGGCAATGGATGCC
          TATGAAACGGCCACTCGTATGAAACTAAATATCCGCATCAAGGCTCCCATTATCATTGTGCCAATTGGGTCACAGGACAG
          GAATGCCTTGCTGCTCGATTTGGGCTTACTGGAGCTAACGAATAACACGGTGGAGGTGGCGGTGGCCGAAGAGGAACGGC
          TAGCTGTTATAGACGAGATCAAGTTGCAAATATGCGATGTTAAGATTTCCAAAATTGTCTTATTAGATGGCAACGAGTCA
          ACGGTTGATGAAGTGGACGCGGAAGTGGGTTTCCTCTCTAAATTCAATATGATGAATCCCATGAGTTGCACCTTATCAAT
          CACGCGCAATTTGTCATACACATGGTACCGGGATGTGCCCGAACTAAATCTTTCCGGTCGATTAAAGTCCATTGAGCTCA
          CTCTATTCGCGGATGATTATGCTTTGGTAATGCTTGTTCTCAATCGCAATTTAAACGAGGGCTTGGAAGAGTTCCCTCCA
          AGCGAGGAGGCGCCGCAGGAAGCACAAGTTAGACCCGAAAGACGCAACTCTCGTGCGGGACGTTTATCTCGTACCGTTCA
          AGTTTCTCCGATAAGGGAAAAGATTCACGAATCAATCAAGTTTAACTTTCAGTTTGACGGTGTGGTCATAAATTTAATGG
          AGGGTGAAGGAGCAGGACTCGCCAGGTTTGGAATATATTTCCTCTCCGTTAAGGGCACCAAGTTGGACAACGGCACACTG
          AGCACTTCTGTTGTATTGTGCAATATTCAAATGGATGACATGCGAAGTAATTCCAAAAGCCAGATCCGACAGTACTTGAG
          TCGCAAGGATTGGGTTCAGCCTAAGTTGGATACAGACGAGATCATCGATGCCTGTTACAACGAGCGCAACTTCATGGTCG
          ATGTGACGGCTATAATAAAAGAAGATGACACGTTCGCTGAGGTCCGTGTGCGTGGCTTCGATCTGATCGTCTGCATCGAC
          TTCCTGCTGAAACTGACTACGTTTCTTACCTTGCCGCCTGAGGAGAATCCGCGCGAGTCTGTTTATATAAAGCCAGCGCC
          TGTTTCGGAAACTGCTCGGGATACCAAGCACTCTATTCGCTCCTCCGCCATATTAGCCGCCCAAGAGCTGGTTCCTGTCG
          AGTCATCCAGTCACGAAGTTCCAAACCGAAAAATGAATTTAATACTGCATATTGACGAGCCAGATATAATATTAGTGGAA
          AATCTGGAAGATCTTAATACCAGTTGTATTATTTTCAATGCTCAAGTGCATTTGAATTACCGCAGCATAAACGACAAACA
          GATTGTAAACGGACAGATCGATGCTCTGAAGATGTACATGTGTGCTTTCCTACCAGAGCGGCGAGAGATGACGCGTCATT
          ATATCCTTCACCCGTGCGTTATTAGCCTGCAAGGATCAACTCCCGAAGAAGAGGGCATGCACATTAGCCTAAAGCTCAGT
          GACATTATCATCAACGTGTCGCCGGCCACCATCGAGCTGCTAAACAAGGCAATGCTGAGCGTCTCCAGTGGCACCATGAC
          CAAGTGCGCTATTGCCGAGGAGTCGCGGAACTATTCGAATCTGTGGCATCAGCACCACTTCCATAGCCGCACGTATTGGT
          TCACCAAGGTGGAACAGGGCGTCGATGCCCTGGAGGCTGAGCAGAGAAGCGTCAGCACTGACAACGAAAAGCAGAAGACA
          GAAAAGTGTGTAATTGAAATTCCCAGCATTACGCTCGTGATTGAGTCCGGCGTAGGCTACTACACGAAGCCACTTATTTC
          GCTAGACACCCGCATTACTGCCGTTTTCAACAATTGGAGCCGCAGTCTCACCGCTCATGGCTCGTTGACACTAAATATGA
          ATTACTATAACCAAGCCCTTGCCGAATGGGAGCCTATTATTGAGCTGAACGAGGTCATTGGTCGCAACGGCGTTCGTGAA
          TACACGCCATGGGAGCTTAAGTTCGAAATGGGCATGGAGAAGGTGCAGAGCGAATTGGAAGACGATGCTGAACAGCAGGC
          GATGCACATGAACATCCACTCGGCAGAGACGCTGGAGATTACGTTGAGCAAGACGTGCCTGGGTCTATTGAGCGAACTGG
          CCGAGGCCTTCTCGCAGGCTATTGACCAGAACGGTCTTACCAAGCCAGACATCGTGGCTCCTTACGTGCTGGAAAACGAC
          ACTGGCTTCGATGTTAACCTGAATCTGCGGAAGGGCATCTTTACACTGCACGAAGTGCACCGCGGCGGCACACCTGTGGG
          TGCAAATAGTACCCTTCTTATGGTGGCCCAATCTGAAGAGGTCGATCCCAGCGTCATAAAAACCTGCACCATTTCGACGG
          GCGGAAGGGCATATCTGCAGACTAAGGATCTGAGCACGTTATCAGAAGAGGATTCCGAGGACTACACTCTTTATGTGACG
          ATTGGAGATATCAACAAGGAGATCGCACTGCCCGTTTCCAAGTCGGACACGCGTTTCTTCAACCTGATGCGCAGTACCTC
          TCACGAGCCTTGGGGCATTATTTCTGAAGTAAAGCAGGAGTACGGCACAACCAAAGTCAATATCCATGGTGTTGTTAGTG
          TTCATAATCACTTTACGACCGGCTTGAATATTTATCGACGCAATCCTGCCCCTACTGCACAATGTTTCGAGGATATTTTC
          GTCGGACGTGTGCGTCCCGGCGAAGTGTTCCATGTACCACTGCACGCCATATACGCGGAATCCAAGGATTTATTCTTTTC
          CATGCGCGGCTACAGAAGATCAGTGCAGGGCATTTCGTGGGCTTCCAATCCCTCGGACCTTAACTATTCGCATCAGTTGC
          ATTGTGATCCGACCAATACGTTCGAACCGCTTATCATGAACGCTCGAAGATCAAAATCGGAGGTGTACTTCGAAAACACC
          AACAAGTATACATTGCTAAGCGCCTTCTACACGATTCATCTGCGCCCTCCACTCTATCTGCGCAACTCTCTGCCCATTAA
          TATCCAAGTGTCAGTTGCCGGCTGCTCTGTCCGAAAAGAGGATGGCCTGGATGCACAGTCGTCGCAGCGCTTTGTTGACA
          GAGGCTATCGTAAGGAAGACTTTCTGGACTATGGAGAAAAGCCTGTAAATTCCGGCGACGTGCTCCACCTGCCGACCGTT
          CGATTGGCCTCGAAAGGCAAGGAATCGAAGAGTTTCCTAGTTGTGCGGCTGGTTCAATATCTGGAGAAAGACTGGTCCTG
          CGCTACCGAGATCTGGGATTACACTGATGATGTTATTACCTGGACGTTTTCATCATATGACTCGGAAATGAAGGTGGACA
          TGGATCTTTATGTGAAAACAGAGAACCGACATGGCAGCTTGATGCTTACGCTTTTTAGCCCTTTTTGGATGATCAATAAG
          ACCGGCATGATGCTCACTTACAAATCGGAAACGACCTCCGTGGAAGTTCTCTACCATCCTCCTGAGTATTCTGGTCCCAT
          TTTGTTCACTTTCCGGGATAAGCTATTCTTTGACAAGAAAAAAGCTTCAATTCGCATAGACAATGGTCAATGGAGTGAAA
          AGATTCCATTGGACGTGGCGGGTTCGGTTGGCGAAGTGATCTGCTTTGCGAACAATCAGAAATACCCTGTCGGTGTTCAC
          AACCACTTGACACAGAACTCTTTGACCAAGCAGATAACGTTCATACCCTTTTATATTGTGTGCAACAAGTGTCACTTTGA
          TATAGAACTGCAGGAGCAGAGTCGTCCAGCCGATCCATGGCTCCATCTCGAGCCAAATGAGATGGAACCTCTCTGGCCGA
          GAAACGACACAAAGAACAATTTGGTGGTGCGCGTGGATGGCAAGATTACACCGGCCTTCGACTTTACGGAGGTGATCTGT
          ACGCTCCTGAAACTGGAGGACAGCAAGTACGGCGGTATCAATGTGGACGTTCAGACAACGGAAGGCGGCGTCTATATCAC
          CTTTACGGACTATAAGCCAGCCGATGCGCCTGGCCTGCTCATCAATCACACTGGCAAGCAGATTGTTTACCACGAGAAGG
          GAACCAAAAACGAGCATATCCTAAATGCAAAGAGTACTATAATGTATGCCTGGGACGATCCTACAGGTCCAAAAATGCTT
          GTGTTCGGCACAAACAAGGAAGAGACGGATCTGAAACGAGACGGAATTGGCGAAGTGATCATGCAAGACGGCGGAAAGGT
          TCTATGGGTATCATTCCTCGACGGCCTGCAACGTGTGCTGCTCTTTACGGAAAACGAATCGATCGCCAATCGTACGGAAA
          GCACGGCCTCGTTACAGTCTATTACCCAGAGCATTGATCTGCGTATTCACGGCATTGGCTTGTCAGTGATCAACAACGAG
          ACGGGCCTTGACATACTTTATCTGGGAGTTACCAGCTCCGGCATTATATGGGAGTCAAAGAAAGTGACCAAGAATCGCTT
          TAAGGAGTTAACCATTAACGAAAACGCGCTTTTGGAAATTGAGTATCAAAAATATCTAGTTCACAAGAGTGTCAACGATG
          TGCAGACCTACAAGCTAGATAACAAGTTCCCGATCGACTTCGACCTTATGATCCTCAAGAAGACGGTGGAGAGAAACTTA
          AGACGCAGTTTCTATCCAGCGATTTGGTTGTCCCGCAAGTCGTCGCCATTCCAAAGCCAGCTGCATGTGAAAATTAATCG
          TATACAGGTGGATAATCAGTTCCTGGATCCAATATTCCCTGTGGTGTTGGCGCCAATTCCACCCCCGAAGAGTGTGGCAA
          GTACCACCAGTCTTAAACCATTTATCGAGTGCAGCATGGTGCAGCGCATCATGCCGAACTCAACTGTGCGTCAGTTCAAG
          TACGCCAGGATACTGATCCAAGAGTTCCTCTTCAAAGTCGATTTGAACTTCCTTACTGCCATCGCCGAAATGTTTGCCAA
          GGAGGTCTCGGACGAGGCAGCAGCTAAGCAGTTCCGTCAGGATGTTGAATCAATTGAGCTCCCGCTTTCAGCGTTCTTTG
          AAGAGCACTCGTTGGAGGAGCAGAAGAGCTTTTACGATAACCTGCATTTGGGTCCGCTCAAGATCCATGTCAGCTTCTCG
          ATGGCCGGGTCGGACACAAAGGCGTTGCCCGGTTTCTTGGGCTCATTGGTCCAGGGCGTGGGTGTGACTCTAACGGACGT
          AAACGATGTTGTTTTCCGTCTGGCCTTCTTCGAGCGCGAGTATCAATTCTTCTCCCAAAAGCAGCTAATCAACGAGATCA
          CCTCACACTACACTGGCCAAGCGTTAAAGCAGCTGTATGTGCTCGTCCTCGGACTTGATGTCCTGGGCAATCCCTATGGC
          CTAGTGGTTGGTCTTAAGAAGGGCGTCGAAGACTTGTTCTATGAACCGTTCCAGGGTGCCATCCAAGGTCCTGGAGAATT
          CGCCGAGGGTTTGGTCCTGGGCGTAAAGTCTCTTTTCGGCCACACTGTGGGTGGTGCTGCGGGAGCGGTTTCGAAAATAA
          CTGGTGCTATGGGAAAGGGTTTGGCTGCGCTGACCTTCGACGAGGACTATCAAAAGAAACGACGACAGGGTATTCAAAAC
          AAACCGAAGAACTTCCACGAAGGATTGGCCCGCAGCAGCAAGGGTCTAGTGATGGGCTTTGTGGACGGTGTCACTGGCGT
          TGTAACCAAACCAGTGACTGGGGCTCGCGATAACGGGGTCGAGGGCTTCTTCAAGGGCCTGGGTAAGGGTGCAATTGGCC
          TGGTTGCTCGCCCCACCGCTGGCGTGGTTGACTTTGCCAGTGGCAGCTTCGAGGCTGTGAAACGGGCGGCGGATGCAAGC
          GAGGATGTGAAGCGTATGCGACCGCCGCGTTTCCAGCACTACGACTTCGTGTTGAGACCCTATTGCTTGATGGAGGCGAC
          AGGGAATAAAATAATGAAGGAAACCGACAAGGGTAAATTTGCCACCACAGATAACTTCATTCACTGTGAGGAGATTATCC
          AAAAGTCCGAGTACTTGGTGGTGACCAATTACCGGGTGATGTACGTGCAACGTAACGAGATGTTCGGCGTTTGGACGTCT
          CTTTGGTCCTACCTATGGAACGAGATTAGCTCCGTGGCTGCAACGGCTCGCGGTGTCCAGTTCACAGTAAAGACGGATGG
          CAAGAAGGTACTTGGTCTGTTTAGCAGCAAGGAGTCACCTCGAAAGTTAGTGCTCGTGGCAGATGAGCGCAAACGTGACG
          CTCTTGTGGACATTATAGAATCTCAGCGCTCCGATCCCAATCCGTTAAGGGCCACCATCGCCTATCCGGCTCATAATTGA
          CAATAGAACTGAATTTATTTCCCAACTATATTATAATCCAATCACATCCCCACGACAGCAGCAACGACATGGAAATCTAC
          CTCGATCATCAAGATTTTTTCTGTCCAAGCACCGTGCGCCCAATTGGAAAACTCAAACTTACATGTCGCACTTTTACGTA
          TGTTAACAACCATGGTTTTGATATTAAAATTTTATGTCAAAGTT
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0310024
          10480
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0087984
          3321
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0301727
          3321
          Comments

          3' UTR based on RNA-Seq data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG2093-RA
          Vps13-RA
          Secondary FlyBase IDs
            References (2)