FB2025_01 , released February 20, 2025
Transcript: Dmel\Cenp-C-RA
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General Information
Symbol
Dmel\Cenp-C-RA
Species
D. melanogaster
Annotation Symbol
CG31258-RA
FlyBase ID
FBtr0089973
Feature type
mRNA
Associated gene
Dmel\Cenp-C
Evidence Rank
Length (nt)
4682
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 15 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        CTACAGACGTTACTGGCAACGCCAAATGAATAGCGTCGCGTCTTTTTTGTAGTTTAAAATTTTGTGGAGTTTTAGCGAAA
TAAGTTAAGTTTATTGTTGTCGTGTATGTAACTTCGTGAAGAATCCTTTTTTCAAGTTTCAATTGCAAATATGTCGAAGC
CCCAGAACAACGACACTCTGGAGCTGGACGACATCCTAAGCCAGCCAGTGAAGGACAAGGAGCGCTTCGCCGCCTTTATG
ATGCGCAAGCTTGCCGAAAATAAGCCGGCACAGAATGACAATCTCTTTGGAAACTTCAAACTTGACTTTGACCTTGATTT
CGAGGTTCCACTGATCAAGAAGTCTCAGGCTAAGCCCAAGTCCAAACTACCAGAAGTACAGCCCCTTGGGGAGTTGGTCA
GCAAAAACAGTGCCGCCACCGAGAAAGTCAATGAGCCGCCTGTGGACCAGGCCCCCAATGAGAACGTGCCTCCGCGTCGA
TCGCCAACATTGTCGCCCAATAACCGACGTTCCATGCGCCGCAGTGGAAATGTACCCGGATCTGATAAACTACGTCGACA
TGCCATCCGCCGGCGGTCCAGGAGCTGTGGACGCCAATTGCTTCCAGAGTTTGAGGAGACCGTAAACTTGACCCGCAGCA
TATCAAGTCCTGTAAACTTCTTACCAGAAATAAGCAGCACACCTTGCACAGAGAAACAAAAAGAGGAAGTTGCCAAAAAT
ACAACAAGAGTGGAAACTGATAAACCAGCGGAAAAACCTATGGAACTATCACAAGAACCAGAGCCGGAAAATCCGCTGCA
GACAAAGGTGACCTCACCTGCCAGGAACCCTATTCTTGCAGCTGAAATTGAACAAATCTGCAAAGAGCGACAGAGTTCCT
TTCACAAGAATGTACTGCAGCTGGACTATTCTGGACGGGCACCGTACTCGCGACCCCCTACTCCGTCATCACCATCCGTT
GCGGGCCTACGACGTACCTACACAATGGAAAAGGGCCCAGCTCCAGGCCAGCTGCTGCTATCGCCATCACATCGCTATGA
CACACCGAGCAAAATGCCAGTAGTTAAGGCAAAGCGGTTCAATCAGGAGTTAATGGTCCCGGACACGCCAGAGCGACAAA
GTCACGACCCAGCCTGGCAATCAGAGCCCCAACCGGAGTTCGTAGTGCCGGAAACCCAGCCGCAGGATCTGGGAGAGTTG
GTGCAGACTCTGTCGCGCAGCGCGATCAGCCCAATTGTGGTGATAAACACATCCAATTCGAATCGTAGTGTAAGAAGGGA
CGCTGTCGCAATGAAATCTGTTCCGACTTCGCCAGTTACGGCGTTATCTTCACCACCGATTGCGCCTTCTCCTAGGCGAT
CCGCCGCTGCCTCTCCCCAGAAATCCATTGCACAACTGCCGCGGGTGGAAGAAAATATGGATGCCATAATGACCGACGAC
GAAAGCGACGAACATCCCAGCACTGTGCCATTAAATCTAGCTCCTTCAGGTGGGAACACAACCCGGCAACGGCGTTTGCG
CAGTAGTAATCGGGCTCGAGCTACAATCGAATCTCAGGAGAGCTCTATGCGCTTGCTTAACCTTCACAAGTCGGTCAATG
CCAAAAAGTCAAAGCCGCGAAAGACTGCTATACCGCTGAATAAGGCTCCAAGTGCCCCCATTAATGGCGAGCAGTTTGCC
CGCGAGCTAACCCGGATGAGCAACTACGAGATTTTGGATTTGCGCAAGCGCAACTCGTTGAACGAGATATATCCTTTAAA
TGGGCACAGAAACCATCGTTCAGAGAAGCTTATCCTAGAAGAAGAGATTCAGAGGGAGCTGCTACGTAGAAATCTAATGG
ATGAGGCCGAAGGTTTGCCAAAACAACAGTCCTCGGATGATTCGAATGAAGACTATATACCGGTTCCGCCAAAAACACAA
AGTCTTCGAACTAAAAGCAATGATCGATCGCAGGGACGAGGGCGACCACGATCTACTCGTCGTGATCTTCCAATGACAAC
AGAATTGGTAAACTATTTGGGTCTCTCCCAGACTTTAGAGACTCGACGCAAATCTTCAAAGGACGGCAAGCGTTGTCTGT
ACACAAAGGGTAGCTCGGACCATGAAGATAACGATTCATTATCACCTGTAAAATTGCCAAGACTAAGCAAGAGCATCCAA
ATTGTTCCGCCACCTCCAGTTTCACTGCGCTATTCGCAATCTTTGCAAAATCTGCCCTGCTCCGGAAAATTTGATTTCGA
TAATGTCGTGATGGCAGCCCCACCAGATTTCCATGATAGTGTAAATAGTGATGCAATTGAGATTGCTCCCCCGCCTCCAG
AGTACGTTGTAAATACACGGGGCAGAAGCACAAGTGGGCGAAAGAGCAATAAAAATGACCTGGTTTTACCTCCACCGGGG
TACGAAGGGGGCCAGGAAGAAGAACATGATGAGCGACCAAGCCAGCCGCGTTGCACAGCCAAAGAACTTCAACAATCCAC
TCAGAATGGACGAAGGGCGATGGAGAACGAACTGGTACCACCTCCTATCGAATATGTTGAAGAAGAGAATCGCAACAATG
AGCAATCAAGGAGATCGACGAAAAATGGCAATCTTGTTGATCGAAATACACATAACGCAGTAGAATATTGTGAACCGCCA
GAGCCACCAGAGTACGACGATAGTGACCATGGGCAAGCAAGTATACTGAGGAGAAGTGGAAAAAAATTGCAGCACTCCAA
ACAGAGTGTACAAAAGTCCAATAAGGAACAAATTATTGCACCTTCGTACGAAAATAACGAAGACTATGACAGTGACGAGG
AACCAATTTACAATGAAGAATACGGAAAAGAGGAATCTCAAAATAAAAATGTCACTAGAAGAAAGAGCGATAAGGATGAA
ATGGCATCACATACATTAGAATGTATTGAAGGTCCAGATCCAAATTGGAATTCGTCCTGTAACAAACAGAATCGTAATCA
CCAGAACGCATCAAAAAGCAAAGAAAATGATAAGTTAGCCAATCGTTCATCTAAGTCCCAGAAACTCTCAAATCCCCGCC
AGAATGCAGTTGGTACAGAAAAATCCGTAGCTCTAAGCAATCGAGGGGAAGAATGTACCGAGAAATCATCAGACGTTATG
GAATCACTTCGCGTTAACACACCCACTCCTCCGATTGATCAAAACTCAGATGATGTTCCCAGCAGAAATCCATCTCCCAG
TAGGACTCTTTTGTCTGACGACGTACCCAGCACGAGTAGAGCGGCGTTGGAGTTTTTGCAGCGTAGTCAGAACATGTCAA
AGAGTCGTCCCCCGGATGAATCAAGCGCGGATGTGGTGTTCAAGAAACCATTGGCACCTGCACCAAGGGCGAAATCAAAA
AAAGGGAAGTCTGAAGTAGACAAATTAAAGCTGGCCAAAATGCCGGTGGAAGCTGAGGAACTAAATACTACCGGTATTCG
GAGATCAAAGCGCGGTCAAGTTCCACTTCAGATGAGTTGGTGTCACACCATGGATCCTAGCAAGTTTAACTTTATGAGTG
GCTTCATAGAGCCTCGCAGCAAAAACTCAAAGACGAAAAAGGGAAATTTGAGTAAGGCGAAGAAAGCCAGTGCCACAAAG
CCAAAGCCTACTGTAGAGAAGAACTTACCCGACAACCGGGGACCATTGTGCAGCAGTACCCCAAGAATTTCTGAAAAGCT
GCCAGGGGCCATACCGCATTCCGAATCCCTTGGCCTGAGTACCTTGACGTGGGAAGAAACTGAAGTGCAAGCAGAGGCTG
AGAAGGTGCCCAAGAAAAGGGGACGACCAAAGAAGGCAGTTGGAGGTGTCCAAACTGATACGGAGGCTGAGCCAGAACCA
GAGCCAGAGCCTATGATATCTTCGGTTGCTCCACTTACAAGCGATCAGGAAGAGCCTGACGTTCCTGACGAGCAGGCGCC
TTATACGGAAGCTGCGCTAGGTCCCGTCGTATTTTCAACTCCCCTGAGAGACGAGCAGGAAGAAGCCTCCACTAAACTGA
TGCAGTGGCTGCGTGGCGTCGGCGATGCACCACCCAGTGCAAGTATGTCGGATGAAAACGCCAGTGTCTCTTCTGCAAAC
GAATTGATTTTCTGTCAGGTAGATGGTATCGACTACGCTTTCTACAATACAAAGGAGAAAGCAATGCTGGGTTATATGCG
ATTCAAGCCATACCAAAAACGTAGCATGAAACAAGCGAAAGTCCATCCACTTAAACTCCTTGTGCAATTTGGCGAATTTA
ATGTGGAGACCTTAGCCGTGGGCGAAGAGAAGGAAGTCCATTCTGTTCTGCGTGTTGGTGACATGATCGAGATAGATAGG
GGCACTAGGTATAGTATTCAAAATGCGATAGATAAAGTCAGTGTGCTGATGTGTATACGCAGTTAGTAATTGCTTTGTAA
TTTATATACGGATAAGTATTGAGCCGATTTATATTTCTTACGTTTTCGCCACAGAAAATAAAAATAATAAAGAGTTGTTT
TGTTAAAATATGTAAGACCGACATAGTTTTTTCATGTATTTTAAGTAGCAAAGGTGATAGACCCACGCCATAACTTCGGG
TCATATCCTAGCTGCTTAGAATTTCAAGTTCATTTTATTTCCATTTTCTTTGAAATTCACAAGTCGCTCGCCGTGATGTT
GATGGCATTGGAGACTTCAAAAGCGAAATGGCAAACAGGGGT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Cenp-C-RB
        FBtr0339328
        4453
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Cenp-C-PA
        FBpp0088911
        1411
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Cenp-C-PB
        FBpp0308429
        1399
        Comments

        Extended 3' UTR based on RNA-Seq and/or EST data.

        software_exception: start codon spans intron

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG31258-RA
        (FlyBase, 1996-)
        Cenp-C-RA
        Secondary FlyBase IDs
          References (2)