FB2025_01 , released February 20, 2025
Transcript: Dmel\CG5849-RB
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General Information
Symbol
Dmel\CG5849-RB
Species
D. melanogaster
Annotation Symbol
CG5849-RB
FlyBase ID
FBtr0301164
Feature type
Associated gene
Evidence Rank
Length (nt)
3063
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 41 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Sequence
        AGTTGAGTTGCGGTTGCCAGGGCGCGAACAGTTTTCGATTCGATTCACGATTTTCGTATCACCATGATTACGCCGCCGTC
        GGGAGTGGTAGTGTTGGTGACCCTGGGCCTGCTGGTCAGCGGATCCATGGGTGAAAGGGAGCGATCCTTGCGACTGCCCA
        ACGCCACCTATCCGCTGTTCTACCAACTGCACATATCCAGTGATATTCACAAGGGCCAACTGCTCTTTAGCGGAAATGCC
        ACCATTGACGTAGCCATCCGGCAATCGACGAACGAGATAGTGCTGCACGCCAAAAACTTAACCGATATTCAGATTACTGT
        TCACCGGTTGATGGCCGAAGGATCCGAGATCGTGGACGATCTAACACATACACTGCATCCCACTGCTGCTTTGCTCATCA
        TTCACCCAATCGAAAATTACCAGGCCTTCGAGGAGGGGCAACAATATCGTCTGGAGATTCTCTACACGGCTATTATGGCA
        TCGCGTCCCGCCGGACTTTACTACATGGATTATCGGGATGAGGAGAACAACCACACCGTATACGTAGCCGCCACGCAATG
        TGAGCCAACATATGGTCGTCTAATATTTCCCTGCTACGATGAGCCGGGCTTTAAGTCAAACTTTAGCATTAAAATTACCC
        ACGGTAGTAGTCATTCCGCCATATCCAATATGCCAGTGAAGGAAGTACTAGCTCACGGTGACTTGAAAACCACTTCATTT
        CACACAACCCCACCGATTTCAACCTACCTTGTGGCTTTTGTCATCTCCGATTTTGGAAGCATATCTGAGACTTATCGTGG
        GATCACTCAAAGCATCTATACCTCGCCAACTTCCAAGGAAAAAGGTCAAGTTGCACTGAAAAATGCTGTGCGAACAGTGG
        CTGCACTCGAGGACTACTTCGGGGTTTCCTATCCTTTGCCAAAACTGGATCACGTGGCGCTTAAGAAGAACTATGGAGCA
        GCCATGGAGAACTGGGGTCTAATCACTTATAAGGACGTTAACTTGCTTAAAAACATTTCGTCGGATGGACAGAAACGAAA
        GTTGGACTTGATCACCCAGAACCACGAGATCGCACACCAGTGGTTCGGCAACTTGGTGTCCCCGGAGTGGTGGACATACA
        CTTGGATGAATGAGGGATTCGCCACTTATTTTAGCTATGTGATAACTGATTTGATATACCCCAATGACAAAATGATGGAC
        ATGTTTATGACCCATGAGGCAGATAGTGCATACAGCTACAACAGCTTCTTTGATGTCCATCCAATGTCCCATTACGTCGA
        GGGTGAAAAGGACATCATGGGTGTATTCGACATTATCTCCTATAAGCGAGGTGCATGCGTGATCAAGATGTTTCATCACG
        CCTTTCGTCAGAAGCTCTTCGTGCGTGGTATCAGTCACTTTCTGGAGAAATAGTGCTCTGCTCTTTCGCCCAGTCGTTAT
        AGCGTGGCCAATGAGCTGAACCTCTTCGATGCCCTGCATTCGGAGCTCCAGGATGACGAGTACTTTTCGCATCAGCCATG
        GGCGTCCCGGATAAGGGAGATTATGCTCTCGTGGACGCATAGCGAATGGTTGCCCATTTTGGTGGTCACTCGGAACTACG
        AGAACAACACCATCACGTTTACCCAGCGATCAGTTCACATGAAGGATGAGCTATGGTGGATACCAATAAATTTTGCCACC
        ACACAGTCGCCCAACTTCGAGGACACCCAAGTGGATATGTTTATGCCACCCCAACCACAGTATACGGTATCACTGGAGGA
        TCTGAATATCCATGTCAGCGGCAGGGATTGGATAATGGTGAATAAGCAGCACACCGGTTTCTATCTCGTCCGCTACGATA
        CAGATAATCTAATGGCCATTGCCAGGCAGCTGCAGACGAATCACTCGGTCATCCATCCAATAAATCGACTTGGTCTCTTT
        CGAGATCTGGGTCCCCTGATCGAACATAATGAAATCGAGCAAGTGGAAGTAGTGTTCGAGTTGCTAAAGTACCTTGAGCT
        TGAGGAGGATGTGCTGACTTGGAATCAGTTGCAAGATACGATAGAGTGTCTAACACGAAACTTGCATGGCACCTCCTCCC
        AGAGCCTCTTCAATGAGTTTGTACGCCGCCTGGTTGGCCCGACTTTTCGACGAGTTTACGTGGAACAAGGTGTAAATTTA
        GCTGAAGATGGGATGTTCCGTGGGATTCTAGAAATCGCCTGCTCTGCGGATCTTCCCGAGTGCCTGGAATACACACGTCG
        CCTGGCTAAGGAGCATATAATCGATAAAATTTATTTTAAAGATGGATCAGACTACCATGCCATAATCGATTCCGTGTTAT
        GCATGGGAGTTCGGTATCTAAGCGATCAGGACTTCCAAAGGATAATTGATATGATGCAGGAAATAGATCGAGCTTCGGTA
        TACTATGATGACATTATATATGCCCTCCGGTGCACGCAGAGTCATCGGCATCTGTTATACTATCTGGAAGGTCTGATGGG
        TGAAAACTCCACCCATATGGTCCTTTCCGAATTCGAAGATTTGATGTATCTCCTCTACATATACAAGTCGAATCTGGCCT
        CTCGTCCGGTCATCTGGCAGTATATCGAGCGCAACTACAAGGTGCTCTGTCGAGCACCAAACTTTTTAGAGCACTTTAAA
        CAGCTCGCTGGATTTGTGCCCAGACATCAGAGATCACATTTTGAGAGGCTACGCCAGACAATTGCGAACCACATGATGCA
        GGAGGGTCTTAATACGAACCAAACGCTGATCGAGGTCGATTCTCCGCTGGTGGGCAAAAAGATGAAAATCACCGAAAATT
        TCCAGGACAAGTTCGAGCAGCAGATCCACAAATGGCTGCTCAATGAGCTTCCTCAGGCGACCAGCAGAAGTGATGCCCTT
        TTGTCCGCCTCCCTCAGCGCGGCCAATGGGTCAAGTCGTCCTCAAGGAGTCCTAAAGGAGGCGACTAGGGTGTTGCGCAG
        TGCGTTACGAATAGTAGATATGTATAGGTGACCAGACATTTGGTCTAACTAGGTATCACATAAGTACAGGCTTAATTACG
        AATAAATTAATTTTTTTCAAAAC
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0084125
        3042
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0290387
        449
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0083523
        968
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        Evidence supports alternative splice leading to premature stop codon and/or downstream start; may or may not produce functional polypeptide.

        software_exception: stop codon spans intron

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        CG5849-RB
        Secondary FlyBase IDs
          References (0)