FB2025_01 , released February 20, 2025
Transcript: Dmel\para-RE
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General Information
Symbol
Dmel\para-RE
Species
D. melanogaster
Annotation Symbol
CG9907-RE
FlyBase ID
FBtr0303655
Feature type
mRNA
Associated gene
Dmel\para
Evidence Rank
Length (nt)
6780
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 8 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          CAACAACAACAATACAAGCAAGCACGCTCACAACAAAAGCAGCAACAGCAACAACAACCACAATAGCAACTACAGCAACA
ACAACATCAGCGGATAGAGCGAGCAGCCAGGCACAACATCGATAGACATCGATTAACGCATCGTGCTAAGCGGCGGGCGC
TAATCGAACATGGCGCCTCGGATATAGTTGTAGCTTTAATGTAGCAGGCGACATCCATGTGCCTCATGCCTTGGAAATCT
AAGGCTCTCATCGTTGGCCGCATAGACAATGACAGAAGATTCCGACTCGATATCTGAGGAAGAACGCAGTTTGTTCCGTC
CCTTTACCCGCGAATCATTGGTGCAAATCGAACAACGCATTGCCGCTGAACATGAAAAGCAGAAGGAGCTGGAAAGAAAG
AGAGCCGAGGGAGAGGTGCCGCAATATGGTCGCAAGAAAAAACAAAAAGAAATCCGATATGATGACGAGGACGAGGATGA
AGGTCCACAACCGGATCCTACACTTGAACAGGGTGTGCCAATACCTGTTCGATTGCAGGGCAGCTTCCCGCCGGAATTGG
CCTCCACTCCTCTCGAGGATATCGATCCCTACTACAGCAATGTACTGACATTCGTAGTTGTAAGCAAAGGAAAAGATATT
TTTCGCTTTTCTGCATCAAAAGCAATGTGGATGCTCGATCCATTCAATCCGATACGTCGTGTGGCCATTTACATTCTAGT
GCATCCATTATTTTCCCTATTCATCATCACCACAATTCTCGTCAACTGCATCCTGATGATAATGCCGACAACGCCCACGG
TTGAGTCCACTGAGGTGATATTCACCGGAATCTACACATTTGAATCAGCTGTTAAAGTGATGGCACGAGGTTTCATTTTA
TGCCCGTTTACGTATCTTAGAGATGCATGGAATTGGCTGGACTTCGTAGTAATAGCTTTAGCTTATGTGACCATGGGTAT
AGATTTAGGTAATCTAGCAGCCCTGCGAACGTTTAGGGTGCTGCGAGCGCTTAAAACCGTAGCCATTGTGCCAGGCTTGA
AGACCATCGTCGGCGCCGTCATCGAATCGGTGAAGAATCTGCGCGATGTGATTATCCTGACCATGTTCTCCCTGTCGGTG
TTCGCGTTGATGGGCCTACAGATCTATATGGGCGTGCTCACGCAGAAGTGCATCAAGAAGTTCCCGCTGGACGGTTCCTG
GGGCAATCTGACCGACGAGAACTGGGACTATCACAATCGCAATAGCTCCAATTGGTATTCCGAGGACGAGGGCATCTCAT
TTCCGTTATGCGGCAATATATCCGGTGCGGGGCAATGCGACGACGATTACGTGTGCCTGCAGGGGTTTGGTCCGAATCCG
AATTATGGCTACACCAGCTTCGATTCGTTCGGATGGGCTTTCCTGTCCGCCTTCCGGCTGATGACACAGGACTTCTGGGA
GGATCTGTACCAGCTGGTGTTGCGCGCCGCCGGACCATGGCACATGCTGTTCTTTATAGTCATCATCTTCCTAGGTTCAT
TCTATCTTGTGAATTTGATTTTGGCCATTGTTGCCATGTCGTATGACGAATTGCAAAAGAAGGCCGAAGAAGAAGAGGCT
GCCGAAGAGGAGGCGATACGTGAAGCGGAAGAAGCTGCCGCCGCCAAAGCGGCCAAGCTGGAGGAGCGGGCCAATGCGCA
GGCTCAGGCAGCAGCGGATGCGGCTGCCGCCGAAGAGGCTGCACTGCATCCGGAAATGGCCAAGAGTCCGACGTATTCTT
GCATCAGCTATGAGCTATTTGTTGGCGGCGAGAAGGGCAACGATGACAACAACAAAGAGAAGATGTCCATTCGGAGCGTC
GAGGTGGAGTCGGAGTCGGTGAGCGTTATACAAAGACAACCAGCACCTACCACAGCACACCAAGCTACCAAAGTTCGTAA
AGTGAGCACGACATCCTTATCCTTACCTGGTTCACCGTTTAACATACGCAGGGGATCACGTAGTTCTCACAAGTACACGA
TACGGAACGGACGTGGCCGCTTTGGTATACCCGGTAGCGATCGTAAGCCATTGGTATTGTCAACATATCAGGATGCCCAG
CAGCACTTGCCCTATGCCGACGACTCGAATGCCGTCACCCCGATGTCCGAAGAGAATGGGGCCATCATAGTGCCCGTGTA
CTATGGCAATCTAGGCTCCCGACACTCATCGTATACCTCGCATCAGTCCCGAATATCGTATACCTCACATGGCGATCTAC
TCGGCGGCATGGCCGTCATGGGCGTCAGCACAATGACCAAGGAGAGCAAATTGCGCAACCGGAACACACGCAATCAATCA
GTGGGCGCCACCAATGGCGGCACCACCTGTCTGGACACCAATCACAAGCTCGATCATCGCGACTACGAAATTGGCCTGGA
GTGCACGGACGAAGCTGGCAAGATTAAACATCATGACAATCCTTTTATCGAGCCCGTCCAGACACAAACGGTGGTTGATA
TGAAAGATGTGATGGTCCTGAATGACATCATCGAACAGGCCGCTGGTCGGCACAGTCGGGCAAGCGATCGCGGTGTCTCC
GTTTACTATTTCCCAACAGAGGACGATGACGAGGATGGGCCGACGTTCAAAGACAAGGCACTCGAAGTGATCCTCAAAGG
CATCGATGTGTTTTGTGTGTGGGACTGTTGCTGGGTTTGGTTGAAATTTCAGGAGTGGGTATCGCTCATCGTCTTCGATC
CCTTCGTCGAGCTCTTCATCACGCTGTGCATTGTGGTCAACACGATGTTCATGGCAATGGATCACCACGATATGAACAAG
GAGATGGAACGCGTGCTCAAGAGTGGCAACTATTTCTTCACCGCCACCTTTGCCATCGAGGCCACCATGAAGCTAATGGC
CATGAGCCCCAAGTACTATTTCCAGGAGGGCTGGAACATCTTCGACTTCATTATCGTGGCCCTATCGCTATTGGAACTGG
GACTCGAGGGTGTCCAGGGTCTGTCCGTATTGCGTTCCTTTCGATTGCTGCGTGTATTCAAACTGGCCAAGTCTTGGCCC
ACACTTAATTTACTCATTTCGATTATGGGACGCACCATGGGCGCTTTGGGTAATCTGACATTTGTACTTTGCATTATCAT
CTTCATCTTTGCGGTGATGGGAATGCAACTGTTCGGAAAGAATTATCATGATCACAAGGACCGCTTTCCGGATGGCGACC
TGCCGCGCTGGAACTTCACCGACTTTATGCACAGCTTCATGATCGTGTTCCGGGTGCTCTGCGGAGAATGGATCGAGTCC
ATGTGGGACTGCATGTACGTGGGCGATGTCTCGTGCATTCCCTTCTTCTTGGCCACCGTTGTCATCGGCAATCTTGTGGT
ACTTAACCTTTTCTTAGCCTTGCTTTTGTCCAATTTTGGCTCATCTAGCTTATCAGCGCCGACTGCCGATAACGATACGA
ATAAAATAGCCGAGGCCTTCAATCGAATTGGCCGATTTAAAAGTTGGGTTAAGCGTAATATTGCTGATTGTTTCAAGTTA
ATACGTAACAAATTGACAAATCAAATAAGTGATCAACCATCAGAGCATGGTGACAACGAACTGGAGCTGGGCCACGACGA
GATCCTCGCCGACGGCCTCATCAAGAAGGGGATCAAGGAGCAGACGCAACTGGAGGTGGCCATCGGGGATGGCATGGAAT
TCACGATACACGGCGACATGAAGAACAACAAGCCGAAGAAATCCAAATATCTAAATAACGCAACGGACGACGACACTGCC
AGCATTAACTCATATGGTAGCCATAAGAATCGACCATTCAAGGACGAGAGCCACAAGGGCAGCGCCGAGACGATGGAGGG
CGAGGAGAAGCGCGACGCCAGCAAGGAGGATTTAGGTCTCGACGAGGAACTGGACGAGGAGGGCGAATGCGAGGAGGGCC
CGCTCGACGGTGATATCATTATTCATGCACACGACGAGGATATACTCGATGAATATCCAGCTGATTGCTGCCCCGATTCG
TACTATAAGAAATTTCCGATCTTAGCCGGTGACGATGACTCGCCGTTCTGGCAAGGATGGGGCAATTTACGACTGAAAAC
TTTTCAATTAATTGAAAATAAATATTTTGAAACAGCTGTTATCACTATGATTTTAATGAGTAGCTTAGCTTTGGCATTAG
AAGATGTACATCTGCCACAAAGACCCATACTGCAGGATATTTTATACTATATGGACAGAATATTTACGGTTATATTCTTC
TTGGAAATGTTAATCAAGTGGTTGGCGCTCGGCTTCAAAGTGTACTTCACCAACGCGTGGTGTTGGCTCGATTTCGTGAT
TGTCATGGTATCGCTTATCAACTTCGTTGCTTCACTTGTTGGAGCTGGTGGTATTCAAGCCTTCAAGACTATGCGAACGT
TAAGAGCACTGAGACCACTACGTGCCATGTCCCGTATGCAGGGCATGAGGGTCGTCGTTAATGCGCTGGTACAAGCTATA
CCGTCCATCTTCAATGTGCTATTGGTGTGTCTAATATTTTGGCTAATTTTTGCCATAATGGGTGTACAGCTTTTTGCTGG
AAAATATTTTAAGTGCGAGGACATGAATGGCACGAAGCTCAGCCACGAGATCATACCAAATCGCAATGCCTGCGAGAGCG
AGAACTACACGTGGGTGAATTCAGCAATGAATTTCGATCATGTAGGTAACGCGTATCTGTGCCTTTTCCAAGTGGCCACC
TTCAAAGGCTGGATACAAATCATGAACGATGCTATCGATTCACGAGAGGTGGACAAGCAACCAATTCGTGAAACGAACAT
CTACATGTATTTATATTTCGTATTCTTCATCATATTTGGATCATTTTTCACACTCAATCTGTTCATTGGTGTTATCATTG
ATAATTTTAATGAGCAAAAGAAAAAAGCAGGTGGATCATTAGAAATGTTCATGACAGAAGATCAGAAAAAGTACTATAAT
GCTATGAAAAAGATGGGCTCTAAAAAACCATTAAAAGCCATTCCAAGACCAAGGTGGCGACCACAAGCAATAGTCTTTGA
AATAGTAACCGATAAGAAATTCGATATAATCATTATGTTATTCATTGGTCTGAACATGTTCACCATGACCCTCGATCGTT
ACGATGCGTCGGACACGTATAACGCGGTCCTAGACTATCTCAATGCGATATTCGTAGTTATTTTCAGTTCCGAATGTCTA
TTAAAAATATTCGCTTTACGATATCACTATTTTATTGAGCCATGGAATTTATTTGATGTAGTAGTTGTCATTTTATCCAT
CTTAGGTCTTGTACTTAGCGATATTATCGAGAAGTACTTCGTGTCGCCGACCCTGCTCCGAGTGGTGCGTGTGGCGAAAG
TGGGCCGTGTCCTTCGACTGGTGAAGGGAGCCAAGGGCATTCGGACACTGCTCTTCGCGTTGGCCATGTCGCTGCCGGCC
CTGTTCAACATCTGCCTGCTGCTGTTCCTGGTCATGTTCATCTTTGCCATTTTCGGCATGTCGTTCTTCATGCACGTGAA
GGAGAAGAGCGGCATCAACGACGTCTACAACTTCAAGACCTTTGGCCAGAGCATGATCCTGCTCTTTCAGATGTCGACGT
CAGCCGGTTGGGATGGTGTACTGGACGCCATTATCAATGAGGAAGCATGCGATCCACCCGACAACGACAAAGGCTATCCG
GGCAATTGTGGTTCAGCGACCGTTGGAATAACGTTTCTCCTCTCATACCTAGTTATAAGCTTTTTGATAGTTATTAATAT
GTACATTGCTGTCATTCTCGAGAACTATAGTCAGGCCACCGAGGACGTGCAAGAGGGTCTAACCGACGACGACTACGACA
TGTACTATGAGATCTGGCAGCAATTCGATCCGGAGGGCACCCAGTACATACGCTATGATCAGCTGTCCGAATTCCTGGAC
GTACTGGAGCCCCCGCTGCAGATCCACAAACCGAACAAGTACAAGATCATATCGATGGACATACCCATCTGTCGCGGTGA
CCTCATGTACTGCGTCGACATCCTCGACGCCCTTACGAAAGACTTCTTTGCGCGGAAGGGCAATCCGATAGAGGAGACGG
GTGAGATTGGTGAGATAGCGGCCCGCCCGGATACGGAGGGCTACGAGCCCGTCTCATCAACGCTGTGGCGTCAGCGTGAG
GAGTACTGCGCCCGGCTAATCCAGCACGCCTGGCGAAAGCACAAGGCGCGCGGCGAGGGAGGTGGGTCCTTTGAGCCGGA
TACGGATCATGGCGATGGCGGTGATCCGGATGCCGGGGACCCGGCGCCCGATGAAGCAACGGACGGCGATGCGCCCGCTG
GTGGAGATGGTAGTGTTAACGGTACTGCAGAAGGAGCTGCCGATGCCGATGAGAGTAATGTAAATAGTCCGGGTGAGGAT
GCAGCGGCGGCGGCAGCAGCAGCAGCAGCAGCGGCGGCGGCGGGCACGACGACGGCGGGAAGTCCCGGAGCGGGTAGCGC
CGGGCGACAGACCGCCGTTCTCGTGGAGAGCGACGGGTTCGTGACGAAGAACGGCCACAAGGTGGTCATCCACTCGCGAT
CGCCGAGCATCACGTCGCGCACGGCGGATGTCTGAGCCAGGCCTCGCCCCCCCCTCCAAGATGCACGCGAGTATTAGCAT
GAGTACGTGTTGGATGTTGCATGTTGCATCAGCGATGCAGCAGCGACAGTGAGCTAACAACAACAGCAACAAGGCGAACA
ACAAGCATAATTTTCTGCTATATAATGAAAGAACACCATACAAACAAATACAACAACAAT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          para-RA
          FBtr0074298
          6849
          para-RAA
          FBtr0303677
          6708
          para-RAB
          FBtr0303678
          6714
          para-RAC
          FBtr0303679
          11444
          para-RAD
          FBtr0303680
          6714
          para-RAE
          FBtr0303681
          6780
          para-RAF
          FBtr0303682
          6786
          para-RAG
          FBtr0303683
          6723
          para-RAH
          FBtr0303684
          6777
          para-RAI
          FBtr0303685
          6714
          para-RAJ
          FBtr0303686
          6852
          para-RAK
          FBtr0303687
          12006
          para-RAL
          FBtr0303688
          6789
          para-RAM
          FBtr0303689
          6705
          para-RAN
          FBtr0303690
          6885
          para-RAO
          FBtr0303691
          6795
          para-RAP
          FBtr0303692
          6747
          para-RAQ
          FBtr0303693
          6723
          para-RAR
          FBtr0303694
          6607
          para-RAS
          FBtr0303695
          6657
          para-RAT
          FBtr0303696
          6624
          para-RAU
          FBtr0303697
          5965
          para-RAV
          FBtr0303698
          5941
          para-RAW
          FBtr0303699
          6642
          para-RAX
          FBtr0303700
          6753
          para-RAY
          FBtr0303701
          6852
          para-RAZ
          FBtr0303702
          6789
          para-RB
          FBtr0111022
          6849
          para-RBA
          FBtr0303703
          6852
          para-RBB
          FBtr0303704
          6654
          para-RBC
          FBtr0303705
          5712
          para-RBD
          FBtr0303706
          6624
          para-RBE
          FBtr0303707
          6665
          para-RBF
          FBtr0331170
          6849
          para-RBG
          FBtr0342746
          15578
          para-RBH
          FBtr0344944
          6621
          para-RC
          FBtr0111023
          6849
          para-RD
          FBtr0290121
          6798
          para-RF
          FBtr0303656
          6780
          para-RG
          FBtr0303657
          6717
          para-RH
          FBtr0303658
          6747
          para-RI
          FBtr0303659
          6693
          para-RJ
          FBtr0303660
          6756
          para-RK
          FBtr0303661
          6684
          para-RL
          FBtr0303662
          6717
          para-RM
          FBtr0303663
          6756
          para-RN
          FBtr0303664
          6756
          para-RO
          FBtr0303665
          6732
          para-RP
          FBtr0303666
          6819
          para-RQ
          FBtr0303667
          6684
          para-RR
          FBtr0303668
          6693
          para-RS
          FBtr0303669
          6756
          para-RT
          FBtr0303670
          6786
          para-RU
          FBtr0303671
          6810
          para-RV
          FBtr0303672
          6747
          para-RW
          FBtr0303673
          6762
          para-RX
          FBtr0303674
          6831
          para-RY
          FBtr0303675
          6870
          para-RZ
          FBtr0303676
          6723
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          para-PE
          FBpp0292672
          2108
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          para-PA
          FBpp0074073
          2131
          para-PAA
          FBpp0292694
          2084
          para-PAB
          FBpp0292695
          2086
          para-PAC
          FBpp0292696
          2084
          para-PAD
          FBpp0292697
          2086
          para-PAE
          FBpp0292698
          2108
          para-PAF
          FBpp0292699
          2110
          para-PAG
          FBpp0292700
          2089
          para-PAH
          FBpp0292701
          2107
          para-PAI
          FBpp0292702
          2086
          para-PAJ
          FBpp0292703
          2132
          para-PAK
          FBpp0292704
          2097
          para-PAL
          FBpp0292705
          2111
          para-PAM
          FBpp0292706
          2083
          para-PAN
          FBpp0292707
          2143
          para-PAO
          FBpp0292708
          2113
          para-PAP
          FBpp0292709
          2097
          para-PAQ
          FBpp0292710
          2089
          para-PAR
          FBpp0292711
          240
          para-PAS
          FBpp0292712
          2067
          para-PAT
          FBpp0292713
          2056
          para-PAU
          FBpp0292714
          1125
          para-PAV
          FBpp0292715
          1117
          para-PAW
          FBpp0292716
          2062
          para-PAX
          FBpp0292717
          2099
          para-PAY
          FBpp0292718
          2132
          para-PAZ
          FBpp0292719
          2111
          para-PB
          FBpp0110321
          2131
          para-PBA
          FBpp0292720
          2132
          para-PBB
          FBpp0292721
          2066
          para-PBC
          FBpp0292722
          872
          para-PBD
          FBpp0292723
          2056
          para-PBE
          FBpp0292724
          917
          para-PBF
          FBpp0303597
          2145
          para-PBG
          FBpp0309614
          2131
          para-PBH
          FBpp0311217
          2055
          para-PC
          FBpp0110322
          2131
          para-PD
          FBpp0288560
          2114
          para-PF
          FBpp0292673
          2108
          para-PG
          FBpp0292674
          2087
          para-PH
          FBpp0292675
          2097
          para-PI
          FBpp0292676
          2079
          para-PJ
          FBpp0292677
          2100
          para-PK
          FBpp0292678
          2076
          para-PL
          FBpp0292679
          2087
          para-PM
          FBpp0292680
          2100
          para-PN
          FBpp0292681
          2100
          para-PO
          FBpp0292682
          2092
          para-PP
          FBpp0292683
          2121
          para-PQ
          FBpp0292684
          2076
          para-PR
          FBpp0292685
          2079
          para-PS
          FBpp0292686
          2100
          para-PT
          FBpp0292687
          2110
          para-PU
          FBpp0292688
          2118
          para-PV
          FBpp0292689
          2097
          para-PW
          FBpp0292690
          2102
          para-PX
          FBpp0292691
          2125
          para-PY
          FBpp0292692
          2138
          para-PZ
          FBpp0292693
          2089
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          Transcript structure supported by FBrf0204634 and FBrf0209044. Corresponds to transcript 1.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          para-RE
          Secondary FlyBase IDs
            References (0)