FB2025_01 , released February 20, 2025
Transcript: Dmel\CG11961-RC
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General Information
Symbol
Dmel\CG11961-RC
Species
D. melanogaster
Annotation Symbol
CG11961-RC
FlyBase ID
FBtr0308495
Feature type
mRNA
Associated gene
Dmel\CG11961
Evidence Rank
Length (nt)
3589
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 52 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TTCAGTAGAGCGTTGGACGCCGACGCGATCGGTTCATTGGGAGATCTTGACCAAAATACCGGGCATCGTTATCCGGAAAC
ATGAGTGGCAGTGAGAAGAATGTACGGCGTCGCGTCATTACGCCGACCAACGATCCTACGAATGTGGATCCATTGCTACG
ACCCCGCGGTTCCCAGCAGTATGAGGCTCAGCCCAATGGCTGTGAGCGAGCATTCGTCCAGGGAAACAAGATTAAGTGGT
TCTGGGCACCCGCCTTCTTTGGATTCTGGCTGCTGCTCTATGTGACCATCTCGATACCCGCCTGCCACCGCCTTCCCCGC
CCACTGACCATTCAGGATGAGGAAACGCATCCCGACCAGTTCATCGCCGAGCGCGCAGAGAAAAATCTACGGGAGCTAGT
GAGCCTGGGACCCCGAGTGGTGGGCAGTCGACAGAATGAGATGGCCGCTTTGAAGATGCTCTCCCAGAAGATGCAAAAAA
TTCGATCCGGCACTGCCAACGATATTGAAGTGGATGTTCAGGTGGCATCCGGTAGCTATGTTCACTGGTCCATGGTCAAT
ATGTACCAGAGCATTCAGAATATTGTCGTTAAGATCAGTCCCAAGAACACGAACAGCACTACTTATCTTCTGGTAAACAG
TCACTATGATTCCGTGCCGGCGGGACCTGGTGCTGGTGATGATGGTTCCATGGTGGCCACTATGATGGAGGTACTCCGTG
TGCTGGCCAAGTCCGATAAGCCACTAAAGAACCCTGTGGTATTCCTGTTCAATGGTGCCGAGGAAAATCCCCTTCAGGCC
TCGCATGCCTTCATCACCCAGCACAAGTGGGCCAAATATTGCAAAGCCCTTATCAATCTCGATTCCTGCGGAAATGGCGG
TCGAGAGATCCTCTTCCAATCGGGACCCAATCATCCCTGGCTAATGAAGAACTACCGACGTGCCATCAAGCACCCGTATG
CTTCTACAATGGGCGAGGAGCTGTTCCAGCACAATTTCATTCCCTCTGACACGGACTTCCGCATTTTCCGTGACCATGGA
TCGGTTCCCGGCTTGGATATGGCCTACACCTACAACGGATTTGTCTACCACACGCGACACGACAAGGCAGAGATCTTTCC
CAGGGGTAGTTTCCAGCATACTGGCGATAATCTGCTTGCTTTGGTCCGACAGATTGCAAACTCTCCGGAGATTGAGAATT
CAGCGAAATACGCCAAAGGTCACACCATCTATTTCGATGTTATGGGTTGGTTTCTGGTTTTCTACACCGAAACCGAAGGC
GTTATCTTGAACGTCATCGTCTCCTTGGTATCCATCGGGATTTGTGGCTACGCTTTTAAGCTGATGTCGGTCAACTCGGG
CATAAAGCTCGAAAAGATCCTCAAGAAGGTGGGGCACACACTCCTCGTACAGATTCTATCTGTTGTTGTGGGAGCCATCC
TGCCAGTTTTGCTCGGTCTGTTCATGGATGCGGTGCATTTGCCTCTGTCGTGGTTCTCGAACTCCTGGCTCATCCTGGGT
CTCTACTTCACCACTTTCTTCTTCGGTTTGGCCATAGTGCCTGCCTTGTACTTCCACTGGACCAAGCGTGATAAGCTTCC
CATTGGTCAGCGGGTTCAGCTTTTGCTGCACTGCCACTGCCTACTTTTATCTGTTCTCACCCTGATCTTCACCATCTGTG
GAATTCGCTCTGTTTTTGTTTTGATGCTCAGTTGCTTGTTCTATACAGTGGGCTTGATCATTAATATTGCCACCAAACTG
CACACCAAAGATGTCGCATGGGTCATTCCGCACATTGTTTGCACTGTGCCACCATTTGTATTCTTTGCATATTTCTCGCA
CGGATTCTTCACCACGTTCATTCCAATGTTTGGTCGTTTTGGAGAGAACCTTAATCCGGATTTGGCGGTGGCTGTTTTCA
GTGTCGCTGTGGGCTTCCTCTGCTGCGGTTTCATTATCCCTGTTCTGCAGTTGTTCAACAAATCGAAGACCATCATCTGC
GGCCTGATGGGCATCACGTTATTGTGCTTCATTATTGCAATGACACCAATTGGATTCCCCTATCGCCCAGAAACGAATGT
CCAGCGTTTCGCTGTCCTGCACACCAAGCGTACCTTCCACGACGCTCAAAACAAAGTGCGCCGTCAGGAATCTGGTTACT
TCATTATGCCCCAGGACAGACGCACTTACACCGTGAAAAATGCTGTTATCAACATGACACTGGCCCAAAGAATTGGATCC
GATTGCGATAAGGAAATTAATTGCGGATTGCCCCTATATAATCAGCGTTGGCACAAGACCAGAAAGAACAGTTTATGGAT
ACCCGCATCGGAACCTGTTCTTGGCGAGAATGTGCCAACCGTTTTATTGCTCTCCAAGAATACAGTGTCGCCCACCAAAA
TTCGCTATGAAATGCAGCTAAGTGGACCCAATCACATGGCCCTCTTTATACAGCCCTTGAACGGAGCAAAGATGATGGAC
TGGTCCTTCCATCAGGCACCCTTACGTCTGAGCTTTGAGCCACCTTACTTCATCTACTTCTCGTGGGGTGTCAATGGAGA
TCCACTTAAATTCTGGCTAGAACTAGAGAAACCCAACGGAAATTGGAACTCTTCTACTCTGGAACTTGGGCTCGGAGGCC
ATTGGAACCATCACAAGGAACTAATAACGCCTGACTTTAAGAAGTTCCTCGACAGTTTCCCCCATTATGTGGATGCCACA
CCCTGGCCAGCTTCATTCGAGAGCCGGATCTTCTAGAGAAGCTATCTAATGTATACATTTTTGTACCTTCGTAAAATAAA
TATCGTAAGAACTTTGTTCTTGAGATATGAAAAACCATAATCATTGATAAGCGTCAGTTATATTGGGCTGTTCATTTATC
AATAATTAATAATAACTAATCCCCTAAGCTATGCGGCCGATATCAAAGTGTTGCGATTGTATATCGCCAATTGAAAGTTA
CATAATTCCTAAACGTAGAATGTATTTTCTACATGATATGAATGTAGAAATGAGGACTGTTCTACCAAGAAGAGTGTATG
TACTTTCGGTGTCCGTAAAATGAATGTCCAAAATTGGTATTAACTCGAATTTTATGGCCTCGTCGGGAAATAATCGGCCA
TAGATTTAGAATTTATGGTCCAGAGTTTAGCCAACTTGTGTCCCACGCAAAAATATAAATGGCGAAATCGCACATCGCCC
CCAAAAAAATAGAGTATTTTTCATAATGTCCATTCACGGAAAGTGTGATGCAGACTGATTTTAGATTGCCAGATTAGGAT
TTGATAATTTAATATGTCCGAATGCTTATCAGCATGAATAGTTGAACATTTCCGAATGATTATCATTGAGGTAAACACAA
ATTTAATAAACGTGTGACCAAAATTTTCGTTTAGCCTGTAATGTTCACAGTAGTAAATCATGAGCTGTCCTATAGTACGT
CCAGCTTAGACATATTTATTAGTATTTAGTCCCGCTATAAAAAAAAAACCTAAGGCAATAAGAAACAACCAGTGCCAGAC
AGGTATTCTTATCTGAGCCAAAAATCTAATATACAGCACCAAAAAAATGGTTTAAATTTATTTTGGGTC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        CG11961-RA
        FBtr0086520
        2838
        CG11961-RB
        FBtr0086519
        2960
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        CG11961-PC
        FBpp0300747
        891
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        CG11961-PA
        FBpp0085708
        891
        CG11961-PB
        FBpp0085707
        867
        Comments

        Extended 3' UTR based on EST and RNA-Seq data.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        CG11961-RC
        Secondary FlyBase IDs
          References (0)