FB2025_01 , released February 20, 2025
Transcript: Dmel\scaf6-RE
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General Information
Symbol
Dmel\scaf6-RE
Species
D. melanogaster
Annotation Symbol
CG33522-RE
FlyBase ID
FBtr0345067
Feature type
Associated gene
Evidence Rank
Length (nt)
2998
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 39 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        TGGGCACACTGTCGGAAAAAACAAGAAGAAGCAGTGAAAAGTGCCGCTGAAAAAGTGCAAAAAGTTATGAATTTAGTATT
        TTACATAGGATAATAGTGCTAATAACAGTCGCAAAATGGACGTGCAACCGCCACGCGATGCCAGTTTACGAAATATTATC
        GACAAACTGGCGGAGTTTGTGGCCAGAAATGGGCCGGAATTCGAGGCGATAACCAAGCAGAAGCAGCAGAACAATCCAAA
        GTTCGAGTTCCTCTACGGCGGGGAGTTCGCCAACTATTATCAATTCAGGGTGGCAGCGGAACAAGCTCTGCTAAAGCAAC
        AGGCCATTAACCAACAACTGCCACCAGGTGCTCCATCCGGCCACTACATGCAACATCCGCCGCCAATGCAGCAATCCCAA
        CCACCGGGCCTCTATCCGCCACCCAATCAGCAGCCACCGCACCCGCCCGAAACCGCACAAGACAATATGCAACAGCAAAC
        ACAGCACTCCTGGCCGCCGAACTCCGGCAACGGTGGGCCGCCAAACAATCAGCAGGCCAATGGCAATCCCATGGCCATGA
        ATCTAACGTCACAACTGGAAGCCATCAAGATGCAGCAGAAGTCGCTGCGGGAACAGATCCAGCAATCCGAAGCGAATCTC
        TCCGCACAGCACACGGCCCTGATGAATCAGAAGACCAAGCAGATCGAGGATGCAATTGCGGCGGCGCAGACGGCGCAGCA
        GGAACAGATGGCTGGCGAACAGGGCATTGTGCTGAGGGACTTCGATGGCGTTCTGCAGCCGATCATCGAGTCCTGCACGA
        AGGACAGCATCTCTGCAGGGCTTTGGTCAATGGTTCAACGTTTCAGCAAAAATTGCATCTTATATATTTAGTTAATGATA
        TACTCCATCACTGCATGCGCAAGAACATCAATGACTTGAAGAACAGCCTCGAGAACGTCGTCATTCCGATGTTCTGCAGC
        GCCGACTTGATTGGCAACCCCGACCAGCGCCAGAAGCTAGCCAAGCTGCTGTCTCTGTGGGAGTCCAAGGCGAAGTTCTT
        CGATGCCTGCGTCATCTCGAAGCTTCAGTCACCGGACTCGTCAATGCAGGAGTACAAAACCAATCTGCAGAACACACATC
        ATGATATAACTGCTAAATTCACGCAGAATACCAAGGCGACTTTGGATAACTATCAGAAACAGCATCATGTATTTATCCAA
        CATGCTAGCCAGCAAATTGTGCAGCTGGAGAAACAGGCGCAGCACCTGGAGCAGCAGATTGTGGCCCAGAAGTCCCAGCA
        GCAACACATGCTTCAGCATCAGCAGAAGAACATACCATCGCTGATGTCCCACCGAATAGCAATGCCGGGTGACCATGAGC
        ACATGAATAGCCAGGGGCCGCATGATCAGCAGCATCCGCAGGCGGGAAATAATATGTATCCAGGTGGTAACTTCCAACAG
        CAGCAGCCACCACCGGGGAATCACTTTGCGGATCCACGCGGACCGAACTTCTTCATTCCGGACATGTCCAAACCACCACC
        AGGCTTCCCCGGACCCATGCATCATAATCAGGGCCCAGCAATGGGCCAGCAGCAGCCACAACCGGGACAGTTTCCGCCCA
        TGCAGGCGCCGGGTTCTGGCAATGAACCACCTGTTGATCTTGGCGTTCTCAGTGCAGCGATTCAGGCGTGCTTACAGATG
        CAGCAGCAACACCATCCTGACGACCCTCAGCAACAAGGACAGCACCAACTGCAGCAGCAGCAGCAGCAACAACCGCAGCA
        GCAAAAGCAGCCGCCGCCAATGGCTGCCTATCCCCAGAATATTGTTAGACCTGGCCAGCAAAATGCTGATAGCAGCGAAG
        TGGATCTGGATGTGCTCAATGCAGCCATTCGCGCGGTTATAACCAACAAACCCGAAGACGGAACATTGGAAGATGGCCAG
        CAACCACAGAAATTGGTCGACGGAGAATCTGGAGAACCTGTTGTGATCGGAGAGCCACAAATACCCACAGCGCCTTACTA
        CGACCTGCCAGCGGGCCTCATGGTGCCGCTCATTCGTCTGGAGGATTACAACTACAAAGCCCTCGATCCGGCGGACATTC
        GACTGCCAGCTCCAGCGCCACAAAGCGAGCGATTAACAAATGCATTGAACGCCTTCTATTCCGCACCCTCACACGATCGT
        CCAAGGGATAATGAGGGTTGGGAGAAGCTTGGTCTCTATGAGTACTATAAGGTGAAGAATGCGGCGCGAAAGCAAAAAGA
        AGAGGAAATCAAGGACGGCATTCGAGAAAAGTCGCGGTCGCCAAGTCCGATTGTGCTCGAGAAACCCCTACCCAAAAAGA
        GCAACAAGCGAGTTTATCGATCCAAGAGTCGCAGTCGCTCCCGCTCAAAAACGCCGCCCCATCGAGATAGATCGTTGTCT
        CGCTCCCGATCCCGCTCGCGATCCATGGAGCGCTCTTTAACGCCGCCACCGATGAATCGGAGCAGGTTGGGCGGTGGTAA
        CAACCGCAAGGGTCGCAATCGATCTCCTCGCCACGAACGGGACAACAACAGCGGCAGCACAAATACCAGAGAGGGCCGTG
        GTGATCGTGGCAATTCCAATAGCCGAGACAATGGCAACAGCACCAACCTAAGACGAGTGGACCGCGACAGATCTCTAACA
        CCTCCGAGCTTTCTGGGAAGCACATTTGCCAAGCCAGCGGATTTCATCGAGGAATCGAACAAGGGCCACCAAATGCTCAT
        GAAAATGGGTTGGGCGGGCACGGGAACTGGACTGGGCTCAAAGAATCAAGGCATCGACACGCCCATTTCGGGAGGCGAGG
        TGCGCGATCGTCGAGAGATGTACAAGGGAGTGGGCGCTAATATGCACGATCCCTTCGAGAGCTTTCGGAAGAACAAAGGA
        GCTGCCTTCGCGCACCGGATGCGATCGCGAGACGACAAGAGTTAGGATCTGCCAACGGTCATAACTTCCCAGTTTTTTGT
        TTCCTTTAGCCCAGAAAATATACATTTTTATAAAAGCG
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0091474
        3071
        FBtr0301554
        1415
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0311297
        251
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0075048
        960
        FBpp0290769
        182
        Comments

        Evidence supports alternative splice leading to premature stop codon and/or downstream start; may or may not produce functional polypeptide.

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        scaf6-RE
        Secondary FlyBase IDs
          References (0)