FB2025_01 , released February 20, 2025
Allele: Dmel\CG43346CR70636-KO-kG4
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General Information
Symbol
Dmel\CG43346CR70636-KO-kG4
Species
D. melanogaster
Name
FlyBase ID
FBal0391189
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
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Allele class
Nature of the Allele
Allele class
Progenitor genotype
Associated Insertion(s)
Caused by aberration
Cytology
Description

A TI{KozakGAL4} DNA cassette has been inserted into CG43346, replacing the coding sequence (coordinates of deleted sequence are 2L:21166108..21166555 , release 6 genome). This results in a simultaneous knock-out of CG43346 plus a knock-in of GAL4 that is expected to be expressed under the control of the endogenous regulatory sequences of CG43346 (predicted to gene trap all annotated transcripts of the gene). The deletion removes part of a dicistronic transcript that encodes CG43345 as well as CG43346 and thus expression of CG43345 may also be affected. The TI{KozakGAL4} cassette was inserted via the CRISPR/Cas-9 drop-in technique, using a dsDNA donor vector with homology arms of length 200bp. The sgRNA sequences used to target the gene were: CTCTTAAGTTAAAATAAGCATGG and ATATAGAGTTACTTCTCCGGTGG. The 3' end of the deletion associated with the insertion is 18 bp downstream of the 3' end of the Noc2 gene and may affect the proper 3' end formation of its transcripts.

Allele components
Component
Use(s)
Mutations Mapped to the Genome
Curation Data
Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
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Reference
 
Marker for
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Reporter construct used in assay
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Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
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External Data
Interactions
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Phenotypic Class
Phenotype Manifest In
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Xenogenetic Interactions
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Complementation and Rescue Data
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Mutant
Wild-type
Stocks (1)
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Synonyms and Secondary IDs (1)
Reported As
Symbol Synonym
CG43346CR70636-KO-kG4
Name Synonyms
Secondary FlyBase IDs
    References (2)