FB2025_01 , released February 20, 2025
Clone: Dmel\GH27809
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General Information
Symbol
Dmel\GH27809
Species
D. melanogaster
Name
GH27809
FlyBase ID
FBcl0115297
Feature type
Computed gene(s)
 
Collection Status
BDGP
Known Problems
none
FlyBase assessment
  • Caution: This cDNA clone replaced by FI05488
Library
GH_cDNA
  • GH cDNA library of D. melanogaster, iso-1 strain, adult head.
Strain
    Vector
    Tissue Source
    Stage
    Tissue/Position (including subcellular localization)
    Reference
    Sequence Data of the Insert
    Full Length Sequence
    Total bases
    5,184
    NCBI
    Full Length sequence dataSequence Downloader
    CAGAAACAATCACACTCTTGTTTGTTAATAATACTAGCGGACTCGCGGCCCCAAGATAGAAAACGGTTCGATCGCGCGAC
    CATCGACCAGCCAATTTTTTTCGCTGCAAATCCGACGCCGCCCGAAAAAGTGAAAGTATTTGCATGTGAGAGGTGGAAAA
    GAGTCGCGGAGTGGGTCAGCGAGCAAGAAGAAGAGCCAGCGGTGCTCGAAAAGAGGGGTGGGGGCAGACACAAAAACGAG
    AAACCGTGAGGCGAAAATCGGAAAAGTGCAATAACGAGGCCGCGAAATCTCTGCTAAAAGGTCAATTTCCACTCGCGATA
    GTTTTAGCCATTAGTTAAGTAGTACAGTACGTCCCGCGTCCGTGCAATTCATACGTTAATACCAATTTATATGTGACCGA
    AATCTGAGAGTGTTTAGTGTGCGCGAGAGAGCGAGACAGCGAGAGCAAGAACAGCATGGGTACAACAAAGGAGCGAAGAG
    AGCAAAGCGAGGGCGACGCCGCCACCACCCACTTAACAACAACAGCAACAGCAACAACAGGAGCAATAGTAGCAGCAGGA
    GTTACTACTACGCTGCCAGCTACAAAAACAACAACCACAGCGGCAGACACGAGCACGACGAATGCCGCCAAAAAGATTCG
    CCGCACCTTCTCCATGCCACGCAATCCCTTCCGCTGGACGCGTAAGTTCAAAACGGCAGTGGCCGTTACGTCGTCCGCGG
    GAGCGGAAAACGATAACGAAAGCGGCAAGAATAACGGGGCCAGGGAGCGGCGTGGCAGCCACACGGCGATCTCGTCCTGC
    GTGGGAGGTGGGCGTGGCAGGAGCGGGAGCATTGTGTCGCTCAGCAGCTACGAGGCCCCATTCATTTCGTCCACCAACAA
    CAACACAACCACCGCCAGCAATGGAAACAACAACAACAGTAGCAGTAGCAACATCAACAGCAAGCGGACACGTGCTCTGC
    GCCGTTCGTCCTTCAGGAAGTTTCTCAACCGGATCGCCCAGCACCTGAGCTCAACGGTTAATGTCGTGTCGGAGGAGAAG
    CACTCGCCTGCGAATCGCATCGCCTTCATTGAAATTGTGCCATTCTACACCGGATGCTGGCGCAGAAAAGAGGCGAACAA
    ACATGGTCAGCCATCGGTTTCGGGCTCTTCGTCGGGCGGCGGAGGAGGAGCAGGAGGACCAGGCGGCGGGGAGAGAGTGC
    CCCCCATCGGAGGCTATCAGTGGCCGGCGGATCAGACTCCAGGTGTAATGGGATTGAAGAACCACGGGAACACTTGCTTT
    ATGAACGCGGTGCTGCAATGCCTCAGTCACACAGACATACTGGCCGAGTACTTTGTTTTAGATCAGTACAAGGCTGACCT
    CAAGCGACGCAACAAGATTAACTCGCGAAAGTTCGGCACTAAGAGAGAGCTCACCGAGCAGCTGGCCAACGTGCTGAAGG
    CGCTGTGGACTTGCAAGAACGAGAGTGATCACAGCACCAGCTTTAAGGCAGTGGTAGATCGGTACGGAACGCAGTTCCGC
    AGCTCGACGCAACACGATGCCCAGGAGTTTCTTTTTTGGTTGCTTGACAAGGTGCACGAGGACCTCAACACAGCCAGCAA
    GCGGCGCTACAAGAGCCTCAAGAACTCGTACGGCCGTTCGGACGAGGTGATCGCCGCCGAGACGCTGGCCAATCACATCC
    GGTGCAACAACAGCTTCGTCCAGGCCGTGTTCCAGGCCCAGTTTCGCTCATCGCTTACCTGCCCGCGCTGCGAAAAGCAG
    TCAAACACATTCGACCCCTTTCACTGCATCTCCGTGCAGCTGCCGCAGCTCACGCAGCAGACGATATTTGTCACTGTAGT
    CTACATGACGCGGCTCCCACGTCAGGTGCGGATGGGCCTGCGAGTTCCAGCCGGATCGCCAATAGTAGCGCTTCGAGAGC
    AGCTTCAGGCGGACACGGGTATCGAGGGATCGCGAATGGTCCTGGTGGACTTAAACGCCGAAGGATTCACCCGCGTTTTT
    TACGACACGCAACCCGTAGAGACGCTATCTAGCATTGAAACAATTTACTGCATCGAGGTGCCGGCGGCAACTCCTGTTGC
    CAAGGCTGCTACTCCTTCAGAGACGGGGGATAAGTCTGCTCCAACAGCAGTGACTCCATCTCCTGCTGCAGCTCAATCGC
    AGGCGGACCTGTTGCTCCTAGTGGCCAACGTATACCGAGCGAAGGATGGCGCGGATATAACCCGCTTTGGAGCCCCCTTC
    AGCATGAAGGCACCTCGTGACTGCTCATACCAGGATCTGCAGAAACGAATGCTCCGCGAAATGGCGCCGCTGCTCAAGCC
    AGAGGTGTTCTCCTATGCCACCCCACTGGCCGAGATGTTCCGTATTCGGCTGCAAGACCCATCCGCAGACCCTGATACCT
    ATTTGGAGCAAGTGGAGCACCCGTTGCTTACCGAAATGATCGACATGGCGCTTTCCGTGCTTTCCTCCGAGGCAGGACCC
    CAGCATATAAAGCTCCTTTTGGAGTGGAGTTCACCCGAGGCACACTTTATCAGTAAACAGCAGGACACGGAAGAAGCCGT
    CGTGGAGCACGAGAGCGTTGCTCGTCTAAGTGCCAGCAAGCCGAGCGACACCGCTGCGCTGACTTTGGAGCAGTGCCTGG
    AGCACTATACCAAGGCAGAGACTCTGAGTGCCGAGGATGCCTGGCGCTGTCCACACTGCCAGCAATACCTTCCAGTTGTG
    AAGACGCTTGGTCTGTGGTCGCTGCCCGACATCCTAGTAGTGCATTTCAAGCGCTTCCGGCAACATCAATCTAAAGGTCC
    GCAAGCGGCTAAGCTGACAACAATGGTCAAGTTTCCGCTGACCGCCTTCGACATGTCACCGCACTTGGCACGTGGCGTGC
    ATGAAAGCGCCAGCAGCTCGCTGGGTATGGGAACGGGCATTGGACTTGGACTCGGGCTGGGCTCGAATCCCTGGAAGAAA
    GCTCGTTCCGTCGACTCGCGGTCCTCCACACTTAACTCGCGCTGTGACGCAAAGGATACGCGGTACGACCTTTACGCAGT
    GTGCTACCATCAGGGAGATACATTGGAAACAGGGCATTATACAGCTGCCTGCAAGAATCCTTACGACCGTCAGTGGTATA
    AGTTCGACGACCAGCGAGTGAGCAAGGTGCCTGAGGACGACATTGAGCAGGACATAATCAATAATGAGGCATACATGCTC
    TTCTACCAGCGACGCAGTGTAGATGCAGGCGAGTGTTCCGGTTCCAGTTCGAACTCCGGAGATCACTGGGTATCGCGAAT
    TGCGCCAGCCTCATCATCGTCCGCATCATCGACGTCAGGAAAGGAGAGGGAGCCGGTTAAGTTGGAGGAAAACACAGAAT
    CTCCTGCGGCAGTAGAAGTAACGGAGAAGGCTCAGTCCAAGCCGGTGGACATAGTTTGCCAGGATAAGGCGAAAGGTACT
    GCAGACGGCCCAGACGCTGATCAAGAACAGACAACTGTTCCACATGATTTACAAATTGAGGAACTGGCATTCGCGGATGC
    AGATGTAGACACCAGTTTAGGAGAGACCATCAAGGCGGAGGTAAATCTAGCGGCTAAGGATGAACCCAAAAAGGTGGAGG
    TAGAGGAAGCCACGCCTATATTTGCCATGGATGAAGACGGTTCCGAAGCTAGACAGGAGAAGAAGGAGGAATGCGTTAAG
    AAGGAAGACGAACTCTCCGAAGCCCCAGATGTGAGCGAACTAACCGCCGAGTCCAAGACCAATGGCCACGTGAGCTCTTC
    GTCCAGCTCTTCCTCCTCGGAAAGCTCGCTATCGTCCCGCTCCTCGCCGCGATCATTGAGTACTTCAGTCACAGCTGCAT
    CTACTCTGCAGAGCAAGTTCAACGGCCACATGAGCGCCGCTCCAGCTCTTTTCAATGGAAATGGAAATACGTCACAGCTC
    TCGTCCAGCTTGCAACTATCCCGGCATGTGCTGCACAACCATCAATGGCACGGATCTAGGAGCAGCGTGTCAGCTGTAGA
    GAATGCTACGCAACATCAACAGCAGCAGGCGGCGGCCAGTCTGAGCCTTCGTCATTCGTTTTCCACAAGTTCAAATTACA
    CGGAGACACTATCATCCTTGCTACGCAAATCAGCAAATACATGCAGCAAGGACACGCTGCTGTTTATCGACCAACAGAGT
    CACCATCATACAGCCGGACTGATCGAAGATGACGATGATTCATACATGGGCAGGTCCCTTTGGATATCGCCCGTAACGCC
    ACACAAACTCATCACTGTTTCGCCCAAGAATTAGATGCGATATTATAATCCATATGGATGTATACTTTGGTAAAGAAACC
    CGAAAATGAAAGCGAAGCCGAAACAAGAATATACAAAACGCACTATAGCCATAAGCCTAAGGTTTACTTTATATGATATT
    TCTTAACCGGAGCTCCCGAGCGATAAGCTCGGGATGAAGATGTTATACAACTTTGTTTAATTTAAGATACGTACTCATAT
    ATACGATACTTGCAATACTGCATAACGTTTGAAAGTTTGATAAAACTTAAATATATTGTATAAGCATTAGACTATTTATT
    CAAAGCCAATGACGAGGATTAGTTTTCTTTATATTTCACCGAATTGACGAAGATTTTTATAACCTAACGACTACCGATAT
    TTATTTAGCCAAACAATGAAGTACAATTTTATTTGATTGAGTTTTTCGTTCAAACTATAAATCTTCTTGTATAATTCCCT
    AACGATTTTTATGATGAAGTGCTTGGCATGCCTAAGTTAAGCTTTTTTTACATGAAACCAAGTTTCGGACTAAAATCTAT
    GAGCATAGTTATAAATGTAAGGACACGTATTCTCTTTAATTACGATTACTTTGAATTGTACATTAATCTATCTGATTGTA
    ACTTTTCCACAACCAAAAAATTCTGGCACAACTGCATATGATTCTTTCGATTCGTTGTCGGGCTACGTTTTGTGAATCGT
    TTATAATGCGGATCTATATACAAACATATATATTTCTTTAAAAATAATGTATTCTATATGTAGACGAAAGCATTACACCA
    AAACATTATATTGATAAAAAATGTTTGAGGACTCTACCACATTGTTTTCTGGAGAGAAAGAACTTTATTACGGTGTAAAA
    TGTTCATTGTATTCATAAATAAACGTGAAGTTGTTGAATATGAAAAAAAAAAAAAAAAAAAAAA
    
    Library Information (1)
    Library: GH_cDNA
    Description

    Cloned cDNAs prepared from polyadenylated RNA isolated from adult heads.

    Sample preparation

    Adult heads were collected from an isogenic y; cn bw sp (iso-1) strain.

    Protocol

    RNA from adult heads was poly(A)+ selected once. Oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested Stratagene Uni-Zap XR vector, which allows in vivo excision and recircularization of pBluescript SK(+/-) plasmid.

    Comment

    The GH library is separate from the HL library. Since many of the HL clones were not full length and others lacked inserts, a new adult head library was made.

    Reported As
    Symbol Synonyms
    References (1)
    Review (1)
    Rubin et al., 2000, Science 287(5461): 2222--2224
    A Drosophila complementary DNA resource. [FBrf0127297]
    External Crossreferences and Linkouts ( 2 )
    Linkouts
    DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
    Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
    Synonyms and Secondary IDs (0)
    Reported As
    Symbol Synonym
    Secondary FlyBase IDs
      References (0)