FB2025_01 , released February 20, 2025
Transcript: Dmel\α-Spec-RA
Open Close
General Information
Symbol
Dmel\α-Spec-RA
Species
D. melanogaster
Annotation Symbol
CG1977-RA
FlyBase ID
FBtr0072789
Feature type
Associated gene
Evidence Rank
Length (nt)
8221
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 90 )
Sequence
ATCGGCCGACATATTGAAAAAAACTGCGGTCCCGTGAAATAGAGGCGCTCCGTGAAAATTACGAATAACTACTGCAAATC
AATAGTTAAATTAACAAAGTAACTGTGAACAAATAGATTGCCATCAAAGTTTGGGCACGGTCAAACATTTGATGAAGGGT
TAGCAGCAGCAGCAGTATTAAATTAAAAACAATCCAGCGCCCAGAGCAACTTAAGCTTTTCAATATCAAAACGAACGAAA
CACTTAAGCAATTAGACAAGTAAACGAACCAGCGAAATGGAGAACTTTACACCCAAAGAGGTGAAGATCCTCGAGACAGT
CGAGGACATCCAGGAGCGACGTGAGCAGGTTCTGTCCCGCTACAATGACTTCAAGATCGAGACGCGCCAGAAGCGTGAAA
AGCTCGAGGACTCGCGCCGCTTCCAGTACTTCAAGCGCGATGCCGACGAGTTGGAGTCGTGGATCCACGAGAAGCTGCAG
GCAGCCAGCGAGGAGAGCTACCGCGATCCGACCAACCTGCAGGCCAAAATCCAGAAACATCAGGCGTTCGAGGCGGAGGT
GTCGGCGCACAGCAACGCCATTGTCTCGCTGGACAACACTGGCCAGGAGATGATCAACCAGCAACATTTTGCCTCCGAGT
CGATTCAGGTCCGCCTCGACGAGCTGCACAAGCTGTGGGAGCTGCTTCTTAGCCGTCTGGCCGAGAAGGGTCTAAAGCTG
CAGCAGGCTCTCGTCCTGGTGCAGTTCCTGCGCCAGTGCGAGGAGGTGATGTTCTGGATTAAGGACAAGGAGACCTTTGT
CACCGCCGACGAGTTCGGCCAAGACCTGGAACATGTAGAGGTTCTGCAGCGCAAGTTCGATGAGTTCCAGAAGGACATGG
CCTCCCAGGAGTATCGCGTGACTGAGGTCAACCAGTTGGCCGATAAGTTGGTGCAAGATGGTCATCCCGAGCGCGACACT
ATTACCAAGCGCAAGGAGGAGCTAAACGAGGCTTGGCAGCGACTTAAGCAGTTAGCCATTGTGCGCCAAGAGAAGCTATT
CGGTGCCCACGAGATCCAGCGTTTCAATCGCGATGCCGACGAAACCGTCGCCTGGATTGCCGAGAAGGATGTGGTCCTGT
CGTCCGATGATTATGGCCGCGATTTGGCCAGTGTTCAGGCGCTGCAACGCAAACACGAAGGAGTGGAGCGGGATTTGGCC
GCCTTGGAGGATAAGGTTTCCACACTGGGAGCCGAGGCCCAGCGGCTGTGCTCCATTCACGCCGATCACAGTGACCAGAT
CCGTGACAAACAGGCCGAGATTGCCAACTACTGGCAGAGTCTCACCACCAAGGCTCGCGAGCGCAAGCAGAAGCTAGATG
AGTCCTACTACCTGCACCGTTTCCTCGCCGATTTCCGCGACCTCGTGTCCTGGATCAATGGCATGAAGGCCATCATCTCG
GCCGATGAGCTGGCTAAGGATGTGGCTGGAGCAGAGGCTCTTCTGGAACGTCACCAGGAGCACAAGGGCGAGATCGACGC
TCGTGAGGATAGCTTCAAGCTGACCACTGAATCCGGACAGAAGCTGCTGGAGCGTGAGCATTACGCCGCCGCCGAAATCC
AGGAAAAGCTTGCCGCTCTGGAAAACGACAAGAGTTCACTGCTCTCGCTGTGGGAAGATCGTCGCATCCTGTACGAGCAG
TGCATGGATCTGCAACTGTTTTACCGCGATACGGAGCAGGCTGACACTTGGATGGCCAAACAGGAGGCCTTCCTGGCCAA
CGAGGACCTTGGCGACTCCCTGGACTCTGTGGAGGCGCTAATTAAGAAGCACGAGGACTTCGAGAAGAGTCTGGCTGCCC
AGGAGGAGAAGATCAAGGCTTTAGACATCTTTGCCACCAAATTAATCGATGGTCAGCATTATGCCGCCGATGATGTGGCC
CAGCGCCGTCAGATGCTCCTAGCCCGGCGGGCTGCTCTCCAAGAAAAATCGTCCAAGCGTCGCCAATTGCTGGAGGATTC
GAACCGCTACCAGCAGTTCGAGCGCGATTGCGACGAGACCAAGGGCTGGATTAGCGAGAAGCTGAAGTTTGCCACCGATG
ACAGCTATTTGGATCCTACCAACCTTAACGGAAAGATGCAGAAGCACCAGAACTTTGAGCACGAGCTGAATGCCAACAAG
TCGCGCATCGAGGACATCACCAACGTGGGCACCGAGCTGATCGAGAAGCAGCACTATGCTGCCGACCAGATCAACACCCG
CATGCAGGAGATCGTCGTCCTGTGGGAGACCCTCGTCCAGGCTTCCGATAAAAAGGGAACCAAACTCAACGAGGCATGCC
AACAGCAGCAGTTCAACCGCACCATCGAGGACATTGAGCTGTGGCTTAGCGAGATCGAGGGTCAATTGTTGTCGGAGGAT
CACGGCAAAGACCTGACCTCCGTTCAGAATTTGCAGAAGAAGCACGCCCTGCTGGAGGCCGATGTGATGGCTCACCAGGA
TCGCATTGAAAGCATCAAAGTGGCCGCCAACAAGTTCATCGAATCCGGTCACTTTGACGCGGACAACATTCGCAACAAGG
AGGGCAATCTGTCGGCTCGCTATGCCGCCCTAGCTGCACCCATGGGCGAGAGGAAACAACACCTTCTTGACTCCCTTCAG
GTGCAGCAGCTCTTCCGCGACTTGGAGGACGAGGCTGCCTGGATCCGTGAGAAGGAACCCATTGCCGCATCCACGAACCG
CGGTCGTGACTTGATTGGTGTGCAAAACCTGATCAAGAAACACCAGGCTGTGCTGGCCGAGATCAACAACCATGAGGCCA
GGCTGCTGAATGTGATCAGTTCGGGCGAGAACATGCTGAAGGACCAGCCCTTCGCCAGCGACGATATCCGTCAGCGTTTG
GAGGCGCTCCAAGAGCAGTGGAACACGCTGAAGGAGAAGTCCAGCCAGCGAAAGCAGGATCTGGATGACTCTCTCCAGGC
ACACCAGTACTTTGCCGACGCCAACGAAGCTGAGTCGTGGATGCGCGAAAAGGAACCGATTGCAACTGGCAGTGATTATG
GTAAGGACGAGGATTCCTCGGAGGCTTTGCTCAAGAAGCACGAGGCTCTGGTCTCCGATCTAGAGGCTTTTGGCAACACC
ATTCAGGCGCTGCAGGAGCAGGCCAAGAACTGTCGCCAGCAGGAGACCCCTGTTGTGGATATCACTGGCAAGGAGTGCGT
GGTTGCCCTCTACGACTACACGGAGAAATCCCCTCGTGAGGTCTCGATGAAGAAGGGCGATGTTCTGACCCTGCTGAACT
CGAACAACAAAGACTGGTGGAAGGTGGAGGTCAACGACCGCCAGGGCTTCGTACCGGCCGCATACATCAAGAAGATTGAC
GCCGGCTTGAGCGCCTCCCAGCAGAACCTAGTGGACAATCATTCGATTGCCAAGCGCCAGAACCAGATCAACTCGCAGTA
CGACAACTTGCTGGCCCTCGCCCGCGAGCGCCAGAACAAGCTAAACGAGACTGTGAAGGCGTACGTTCTTGTTCGTGAGG
CTGCCGACTTGGCCCAGTGGATCCGGGACAAGGAGAACCACGCTCAGATCGCTGATGTTGTGGGAGAGGATCTGGAAGAG
GTGGAGGTGCTCCAAAAGAAGTTCGACGACTTCAACGACGACCTGAAGGCCAACGAAGTGCGTCTGGCAAACATGAACGA
GATTGCCGTGCAGCTGACTTCCTTGGGTCAGACCGAGGCCGCCCTAAAGATCCAAACCCAGATGCAAGACCTGAACGAGA
AGTGGAACAACCTGCAGACGCTGACCGCTGAGAAGGCCAGCCAACTGGGATCCGCCCATGAGGTGCAACGCTTCCATCGT
GACATTGACGAGACCAAGGATTGGATCGCTGAGAAGGCCAATGCCCTGAACAACGACGACCTGGGCAAGGATCTGCGCAG
TGTCCAGACTCTGCAGCGCAAGCACGAGGGCGTGGAACGCGACTTGGCCGCATTGCGGGACAAGATCCGCCAGCTGGACG
AAACCGCCAACAGGCTGATGCAGTCGCACCCGGACACCGCCGAGCAGACCTACGCCAAGCAGAAGGAGATCAACGAGATG
TGGGACCAGATCATCACCAAGTCCACCGCCCGCAAGGAGAAGCTGCTGGACTCGTACGACCTGCAGCGTTTCCTCAGCGA
CTACCGCGATCTGCTGGCCTGGATCAACTCGATGATGAGCCTGGTCACGTCCGACGAGCTGGCCAACGATGTAACAGGAG
CCGAGGCTCTGATCGAGCGTCATCAGGAACACCGAACGGAGATCGATGCGCGCGCCGGAACTTTCGGGGCTTTCGAGCAG
TTCGGAAACGAGCTGCTGCAGGCCAACCACTATGCGTCGCCTGAAATCAAGGAGAAAATCGAGGATCTGGCCAAGGCCCG
CGAGGACTTGGAGAAGGCGTGGACAGAGCGCCGCCTGCAGCTGGAGCAGAACTTGGATCTGCAGCTCTACATGCGTGACT
GCGAGTTGGCCGAGTCCTGGATGTCAGCCCGCGAGGCCTTCCTAAATGCCGATGATGATGCCAATGCCGGCGGAAATGTG
GAGGCACTGATCAAGAAGCACGAGGACTTCGACAAGGCCATTAACGGCCACGAACAGAAGATTGCTGCTCTGCAGACGGT
GGCGGATCAGTTGATCGCCCAGAACCACTATGCCTCCAATTTGGTGGACGAGAAGCGCAAGCAAGTGCTGGAGCGCTGGC
GCCATCTCAAGGAGGGTCTGATCGAGAAGCGATCCCGTTTGGGTGACGAGCAGACGCTGCAGCAGTTCTCGCGCGATGCC
GATGAGATTGAGAACTGGATTGCAGAGAAGTTGCAGCTGGCCACCGAAGAGAGCTACAAGGACCCGGCTAACATTCAGTC
GAAGCACCAGAAGCACCAGGCCTTCGAGGCGGAGCTGGCGGCTAACGCCGATCGCATCCAGAGCGTGCTAGCCATGGGCG
GAAACCTCATCGATAAGAAGCAGTGCAGCGGGTCGGAGGACGCGGTGCAGAAGCGGCTGACGCAGATCGCCGATCAGTGG
GAGTACCTGACCCATAAGACTACCGAGAAGTCGCTGAAGCTAAAGGAGGCGAATAAGCAGCGCACCTATATCGCTGCTGT
CAAGGATTTGGACTTCTGGTTGGGCGAGGTCGAGAGTCTTTTGACCACTGAGGATTCTGGTAAGGATTTGGCCTCTGTCC
AAAACCTCATGAAGAAGCATCAGTTGGTCGAGGCGGATATCGTGGCGCACGAAGACCGCATCAAGGACATGAACAACCAG
GCCGATTCCTTGGTGGAGAGCGGCCAGTTCGATACTGCCGGCATCCAGGAGAAGCGTCAAAGCATCAATGAGCGCTACGA
GCGCATCTGCAACCTGGCGGCCCATCGCCAAGCCCGTCTCAACGAGGCTCTGACCCTGCACCAATTCTTCCGCGACATCG
CCGACGAGGAGAGCTGGATCAAGGAGAAGAAGCTACTTGTCGGCTCCGACGACTATGGTCGCGATCTGACCGGCGTCCAG
AACCTCAAGAAGAAGCACAAGCGCCTAGAAGCCGAATTGGGCTCTCACGAGCCGGCCATTCAAGCTGTGCAGGAGGCTGG
CGAGAAGCTCATGGACGTGTCCAACCTCGGTGTCCCCGAAATTGAGCAGCGCCTGAAGGCTCTGAACCAGGCCTGGGCCG
AGCTAAAGAACCTGGCTGCCACGCGAGGTCAGAAGTTGGATGAGTCGCTGACCTATCAGCAATTCCTCGCTCAGGTGGAG
GAGGAGGAGGCCTGGATCACCGAGAAGCAACAGCTGCTCTCTGTGGAGGACTACGGCGACTCGATGGCCGCCGTACAAGG
ACTGCTGAAAAAGCACGACGCATTCGAAACGGACTTCACTGCCCACAAGGACCGCTGTTCTTTGATCTGCGACCAGGGCA
GTGAGTTGGTGGAGGCCAAGAACCACCACGGAGAGTCCATTGCCCAACGCTGCCAGCAGCTGCGCCTGAAACTGGACAAC
CTGTCCGCCCTGGCTGCCCGCCGCAAGGGTGCCCTGCTGGACAACTCGGCCTATCTGCAGTTCATGTGGAAGGCCGATGT
GGTCGAGAGCTGGATCGACGACAAGGAGAACTATGTGCGCTCCGATGAGTTCGGACGCGACCTGTCCACCGTGCAAACGC
TGTTGACCAAGCAAGAGACATTCGATGCAGGTCTCAATGCCTTCGAGCAGGAGGGCATACACAACATCACGGCACTTAAG
GACCAACTGATAAATGCCAGTCACGCCCAGTCGCCGGCAATCCTAAAGCGTCACGGAGACGTGATTGCCAGGTGGCAGAA
GTTGCGCGACGCCTCCAACACGCGCAAGGACCGACTGCTGGCCATGCAGGAGCAGTTCCGCCAGATCGAGGAACTCTACT
TGACATTTGCCAAGAAAGCTTCGGCCTTCAATTCTTGGTTCGAAAATGCCGAGGAGGATCTCACAGATCCTGTTCGCTGC
AATTCGATCGAAGAAATCCGCGCCCTGCGCGACGCCCATGCCCAATTCCAGGCGTCCCTTTCGTCGGCCGAAGCTGACTT
CAAGGCATTGGCAGCACTCGACCAGAAGATCAAGAGCTTTAATGTTGGACCCAACCCGTACACGTGGTTCACCATGGAAG
CTCTTGAGGAGACCTGGCGTAATCTGCAAAAGATCATAGAGGAACGCGATGGGGAACTTGCCAAGGAGGCCAAGCGGCAG
GAGGAGAACGACAAGCTGCGCAAGGAGTTTGCCAAGCACGCCAATCTTTTCCACCAGTGGCTAACAGAGACAAGAACGTC
CATGATGGAAGGCTCCGGTTCCCTGGAACAGCAACTGGAGGCGCTTCGTGTCAAGGCCACCGAGGTGCGCGCACGTCGCG
TTGACCTCAAGAAGATCGAGGAGCTGGGAGCCTTGCTGGAGGAGCACCTTATTCTGGACAACCGCTACACGGAACACTCG
ACGGTGGGCCTGGCCCAGCAGTGGGATCAGCTTGACCAGCTGTCTATGCGCATGCAGCACAACTTAGAGCAACAGATCCA
GGCACGCAACCACTCGGGCGTCTCCGAGGACTCACTCAAGGAGTTCTCGATGATGTTCAAGCACTTCGATAAGGACAAGA
GCGGCAAGCTCAACCACCAGGAATTCAAGTCCTGCCTGCGCGCCCTCGGCTACGACCTGCCCATGGTGGAGGAGGGACAG
CCCGACCCGGAGTTCGAAGCAATTCTCGATGTTGTCGACCCCAACCGCGATGGCTACGTCTCTCTGCAGGAATACATCGC
GTTCATGATCTCCAAGGAGACGGAGAACGTTCAATCCTACGAGGAGATCGAGAATGCCTTCCGCGCCATCACCGCTGCCG
ACCGCCCCTATGTAACTAAGGAGGAGCTCTACTGCAACCTCACCAAGGACATGGCTGACTACTGCGTGCAGCGCATGAAA
CCCTTCTCGGAACCGCGCTCCGGCCAGCCCATCAAGGATGCCCTGGACTACATAGACTTCACGCGAACGCTGTTCCAGAA
CTAAAGAGCCTGCATTGTCTTATTTAGTGGCGCCTGAGCATATGTCTTACAATTTAAAGTATATTTCTAAAAACCAACAA
AACACAAAAAAAAATCAAACAAAAATATATATTTACACCATTATTTTCGATAATTTAGTCTCTAAGTCAAACAGTTTAAT
GCTTATTTAAGAACCTATGCCACAATGAACCTTAAATCAACAATAGCACCTTGCAATACATATTTATCAACATGACTATG
AACCATTTCTAGTTTTTGCATTTATTTATCAACAGCCCAATGAGAAAGTATCTTAAATTTTGACGTTTCAGTTTGAGAAT
TGGCTACGCGTCCGGTCGCCGAAGAAGATATCTAATCGAGAACATTGTCACAGTAATTTGATCAACTTGCGCCTGAAAAG
CAGATAAAAAGCTTAGCTTCCAGTAATCGAGCACACATTTTCAATATTGAATGTCTGTAACTTGTAACGAACATAGATAC
AACTGATATACCAAAAAGATTTAAGATACTCTTGCTACCAGAAATGCATAATAACCAGCCTTTTATGTTTCCTCCAGTTT
CTACGTGTATTCGAAACGAAAGTAGTAAGCTTTTTCAAAGCAGAAAAAAAAAAGAAAAACAAAACAATAAATATTTGCCT
CTGTATTGGACGTATATTTACAACTCGTGAATTGCAAAAATAAATATATTGCTGCATGTCT
Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0332878
7721
FBtr0332879
8317
FBtr0332880
8251
Polypeptides
Derived from THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0072672
2415
Derived from OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0305100
2457
FBpp0305101
2447
FBpp0305102
2425
Comments

5' exon shared with dlt gene.

Transcript terminates at site supported by polyadenylated cDNA.

External Crossreferences and Linkouts ( 1 )
Crossreferences
RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
CG1977-RA
α-Spec-RA
α-Spec+R9.0
Secondary FlyBase IDs
  • FBtr0004426
References (5)