FB2025_01 , released February 20, 2025
Transcript: Dmel\Calx-RA
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General Information
Symbol
Dmel\Calx-RA
Species
D. melanogaster
Annotation Symbol
CG5685-RA
FlyBase ID
FBtr0083998
Feature type
Associated gene
Evidence Rank
Length (nt)
6137
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 45 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          TTAGTCTTTCATTATCCGGCGTTTGAGCGTGTAACGTTTTCTCCGTGATTTCCACACGCAGCAGCGGTAAATACAACAAC
          AACGACAACGAAAGAAGCAACCAAAACAATAACAACAACAATAGAAGAGAACAGCGGCAAACGGTTTTTCGCTGCGCTTC
          TCCTATTTTAAGTGCCGAGCGTTTTACTATTTTTACTACACAGCGAAACATACACAGATACACATATATACAGAAATATA
          TGTAGGTATTTGTTGATGTGTTTGTTGTGCTTCAGTCAACAATAAAAACAAAAACAGTGTTTAAAGCTAGTGAAATGATC
          TTCCATAAATAAATTTTCAAAATTAATTTGAGAGCAAAAATGAATTGAAAGAAAATGCCAAGAAAGTGCAGCAAAAAATC
          AACAACGATGCTGTCGGAGAGTCGAAACTAGGCTAAATATCTTTGCATACTTTTGGGAAAGTTGTGCGGTACAAACACAC
          ACACCCGTTCGTAACACACACACACAGGACCTGCGCCTGCGGTCGCCGACTTTTGAACCTGTTTTCTGACCATTGACCAT
          TGACCACCGACCGCCGTGCCGGCCGCCTCTTTTCACTTTTGGCAACGCGGACTGCAGCAGCCGCTGCAAAAAATGCAACT
          GTAAAGGAAGCTGCAAGAAAAGGAAAGGATGTGCACGAAAACGGCATAAACCTACAAAACTAGCCAAAAGAGTTCAGAGC
          GGTGCGGTTCAACAGCCTCCGGGTGTTCGTGTCAAGCTCGAAATTCGCAAATTCGGCGTCAGCTTCGTGCATCTGTATCT
          GTGTATCTGTATCTATATCTGGTGCATCTGTGTGCGGCCATTCTGCAGTTGCAGCTCTGCAGCGGCGAAAATTGTGTCAG
          CAGCATCGGCAGCGGATCCTGCAGCTCGCCACACTGGCGCCTCCATCTCCGATTGCCGGTGCAGCGGCCCAACTGCGTCA
          GAGTGTTGAACGTGCCATTGCGAGAATGCCTTCTCGCGGTCCCACGTCATAGTCACCATCATTAGCACCGGGCCATAACG
          ACATTGGCAACTTGCAACTAGCAACACTCCCATTAGCAACACTAATTGCAACTGCAGCAGCAACAAGCGACAGCAACAGC
          AACAAGCAGCAGCAACTAGCAACTGCAACAGCACAAATCACAGCCAAATCGAACGCAACAAAGCTTCCAGAGACAGGCCA
          ACGGGACAGCGAGTGCCCCAATCACTTCCAGGATAAGGAGAAGCCATCCCAGTTAGTAACCAGCCATGCAGTTGCTCCTT
          AAATCGATATTCACCTGCGCACTATTCGTGATCTTTGTGTATGCCACCGCCCAGTCGCTGCTCAAAGTCCAGGAGACAGA
          AGCGCGGCAGGCGTACCTTAATGTTACCTCCTCCAGCAGTAGTAATCTCAGCCAGGACGATGGCCACTTCCTCAGCCGGC
          GACTAAGGCAGGTCAGCCATGGCGAGGAGGGCGACGAGGGCGCGCCGTCCCAAATGGACGACGAGTTGGAACAGATGACC
          AAGGTGCATGGAGAAGCACCGGACGCGGAGGAGCTGCGCGAATGTAGCGAGGGTCTTGTCCTGCCACTCTGGATGCCGCA
          ACGCAACATTTCGGTGGGTGACCGCCTCGTCCGCGGCTTTGTTTACTTCGTCCTACTGATCTACCTGTTTGTGGGTGTGT
          CCATCATTGCGGATCGCTTCATGGCCGCCATCGAGGCAATCACATCGATTGAACGGGCGGTGGTGGTCAAGGGACCCAAC
          AACACCAAGCAGGTGATGCACGTGCGCATCTGGAACGAAACGGTGGCGAATCTAACGCTAATGGCCCTGGGATCGAGTGC
          CCCCGAGATCCTGCTCTCGGTTATTGAGATTTATGCGAAGGACTTCGAGAGCGGTGACTTGGGACCTGGCACAATCGTGG
          GATCAGCTGCCTACAACCTGTTTATGATTATCGCCGTATGCATGATCTGGATACCGGCGGGCGAGGTACGGAGGATCCGG
          CATCTGCGAGTCTTCTTCGTTACCGCCCTCTTCTCGGTCTTCGCCTATGTGTGGCTGTGGCTCATCCTATCCGTGTTCAC
          GCCCGGCGTGATCCTGGTCTGGGAGGCGATCGTGACGTTGCTATTCTTCCCGCTGACCGTGCTGTGGGCCTACATCGCCG
          AGCGGCGTCTTCTGGTCTACAAATACATGGACAAGAACTACCGGGTCAATAAGCGCGGCACCGTGGTGGCCGGCGAGCAC
          GACCAGGTGGAGATGGATGCGGAGAAGGGCCCCAAACAACCAATGGTCACATCCGCTCGCGGAAACGACGCCGAGGCCTT
          CGACGAGGCCCGTCGCGAGTACATAACTTTGCTGACGGAGCTACGCCAGAAGTACCCCGACGCCGATCTCGAACAGCTGG
          AGATGATGGCCCAGGAGCAGGTGCTGGCGCGGAGCAGCAAGTCGCGCGCCTTTTATCGCATCCAGGCCACCCGCAAGATG
          GTCGGCAGCGGCAACCTGATGCGCAAGATCCAGGAACGCGCTCACAGCGATCTCACCGAGGTTAAAGCCCAGCTGCATGC
          GGGCGATGACGAGGAGGCGGACGATCCCATCCGAATGTACTTCGAGCCGGGTCACTACACCGTCATGGAGAACTGCGGCG
          AGTTTGAGGTGCGCGTGGTGCGCCGTGGCGACATCTCCACCTACGCCAGCGTGGAGTACGAAACGCAGGACGGCACCGCC
          TCCGCCGGCACCGATTTCGTCGGACGGAAGGGACTGCTTAGCTTCCCGCCGGGGGTCGACGAGCAGCGCTTCCGCATCGA
          GGTGATCGACGATGACGTATTTGAGGAGGACGAGTGCTTCTACATTCGACTCTTCAATCCCTCCGAGGGCGTGAAGCTAG
          CCGTGCCAATGATCGCCACCGTCATGATCCTGGACGACGACCACGCGGGCATCTTTGCCTTCACAGACTCGGTATTCGAG
          ATCACGGAGTCCGTCGGCCGGTTCGAGCTGAAGGTAATGCGCTACTCCGGCGCCCGCGGCACCGTCATAGTGCCCTACTG
          GACAGAGAACGACACGGCCACCGAATCCAAGGACTACGAGGGGGCCCGCGGCGAACTTGTCTTCGAAAACAATGAATCCG
          AGAAATTCATCGATCTGTTCATCCTGGAGGAGAGCAGCTACGAGAAGGATGTCAGCTTCAAGGTGCACATCGGAGAACCT
          CGATTGGCGCCAGACGATGAATTGGCAGCCAAAATCAAGGAGGTCGAGAAAAAACCCGTTCAGGATCTGACCGAACTGGA
          TCGCATCCTGCTGCTGAGTAAGCCGAGAAACGGAGAACTGACCACCGCATATGTGCGCATTCGAGAGAGCCAGGAATTCA
          AGGCTACAGTCGACAAGCTGGTGGCAAAAGCGAACGTTTCTGCCGTCCTTGGCACTTCATCGTGGAAGGAACAGTTCAAA
          GATGCCCTCACCGTTATCCCAGCCGATGAAAGTGAGTTTGATAACGATGATGAGGAGGAGGAGGTGCCCAGTTGCTTCAG
          CTACGTGAGCCACTTCGTCTGCCTCTTTTGGAAGGTTCTCTTTGCATTTGTGCCGCCCACTGACATTTGCGGCGGCTATG
          TTACCTTTGTGGTATCCATATTCGTGATTGGCGTCATCACTGCCATCATCGGAGATGCCGCCTCCTATTTCGGCTGCGCC
          CTCAACATCAAGGACTCGGTAACGGCCATCCTGTTTGTCGCCCTGGGCACAAGCATACCAGATACATTCGCCAGCATGAT
          TGCCGCCAAGCATGACGAGGGTGCCGATAATTGCATCGGCAATGTCACGGGCAGCAATGCGGTCAACGTGTTCCTGGGCA
          TCGGCCTGGCCTGGACCATCGCCGCCGTCTACCACAGCTCCCATGGCATGACCTTCAACGTGGAGCCGGGAACCATTGGA
          TTCGCCGTGGCGCTCTTCTGCGGCGAGGCCCTGATTGCCATAATGCTCATCATGTTCCGGCGCTGGCACAAGGGCATTGG
          CGCCGAGCTGGGCGGTCCGAAAGTATCGAAGTACATCAGCGCAGCGATCCTGGTATTCCTGTGGGTGTTCTACGTGGTTA
          TATGCATACTGGAAGCCTACGACGTCATCCGGGTTTAAGGAGTTCGCAGCCGCGTTGGTTTGGCTTTGGCTTGATTATTC
          GCAATGGCGTTGGACTTTTCCGTCAAATTGAAGAGGATCGTTACGGCGGAAAACAGAGCTAACCGATACTTAGAAGCTAT
          TGAAAGATGCTGTAGATGCAGTTTTTATATGTAAACTTATGAAATTGATTTATATATATATGTGCTCGGCGCGATATATA
          AATATTTCTTGTGTAAAATTTATGTTAATACTAAAAGTAAAATTTAAAAGTTTAACTAGGTTTAAGCCAGGCTTATATAC
          AAACCATTTTTACGATTATTGTCTCTATTCATATATGAATTGTAAATACAGAAAGGCTGCCACGGCTCAGCAATCTTGTA
          ACCGTAACGAGATCATTTACTGTTATGCCATATATACTTAATTTACTTTCTAAAGAATACTATTATATTTATTATATCAT
          TCTGTGTATAACTTAAGTCATTGTTGTTGTTTGTTAAAGCTGTACTTAATCGACCCCATAAAATCAAAACGGGAAAATCG
          GAATCGATTTAGAGTTTAAATCGTGTTCCGTACTCCAAACTCGATATTGTCTCTCCATTTGCCGAAAACCATTGTTAATT
          TAATACATGTGTAAGTTTTAGGAAAGATCTAAAGGTTTTAGCCAAGAAGAAACGCAGTCCCTCTAGCCATCTACTACAAA
          TACTACAATTATAACTACTACTACTGATTAGGGGCCTCCTTGACAACTAGTTCTAGTCACCTCACACTATCGACACAAGT
          CCAACTAGCAACACTTTCATTAACTCTGACCAAAGCAAAAGGCGGCACTACTTACTAGCGATTAGCTGTTAGCGATTAGC
          CAGAAAGACCATCAGTGTGTCCACACTGCACTATGAAGAACTACACGTACTACCAGTGAGCACTAATCAATTTACTTAAA
          AAAAGACTTTCTATTCGCTTACGTCGCTGGTATCGAAGTAGACAAAACTGGATATTAAGGCAAACACCAAAACAATAGCG
          AAATAATAAGGAGAATTACTAGAATTGATTGTAAACCAAATGTAACGAGCAGGTACATATTTTTTGTATAATGTACTATT
          TTTCATATAACAAAATTGTAGCAAATTAATGGTGAGAAGAGAAGCCTAATGATATTTATAGCCACATGCATAAATTTGTA
          TTATATATTTGGGGTCACACAACTGTACGGGGAACTCGTTGAGAAAACTGCGCCAAATTTAGACGTAATTGATTATTAAT
          TACTGCATATACGAACTATTAAACAATTTAATAAATATACAAACATGAATAAATAATAATGTACTAAGTTATACTGTCAA
          CGTTTACTGCTAGATATTATAATTAAATTTCTTTTTAAATTTATTTCTATAATTGCCTTTTTATTTCCCTTACTAAAACG
          AACTTCAGACAATATCTGAATACTCCTACGTTTTTCATAGATCGCGATATATAAATGCAGTTAACAGACGGTTACAAAAA
          ATCGACCAGGGTCAGGGTAAGAAATCCGTGGCAAGGAAATCAATATATTGCGAATAAAGCGAATAGTATATGAAATCGAG
          GGGCAAGTGCTGAGGAGCAGTGAATGTAACAATACGACACAGAGGATAACCAGATATATAAGCAGACATGCAAATAAATT
          ACCCATAGACGATTATCTTTAATGGCAAAGGCAAATAAAACGATTTAAGTGCTTCCGACATAGGGTTTAGGTACTTCTAG
          AGAACTAGGAGTAGAAAGCGTATCTGAATGAAGAGAAAGAGCATGTTACTTTAGCAAATTATAGGTTCCACTTTACTATG
          ATTGCGTTCTTTAACATTATGTATTGATTTAAACTATTTTAAAATCAGTTGCACAACTAAATGATAGGGTTCGAATTTAC
          ATATATGTCTAATTTTGTATGATTAACATTGCGTTGTTTATATAATTCCCTATTCATTTGACGAGTTTCAAAATCAATAA
          CATATGTGTACCATAGTAGATACCATAGATAGTATTCGAATCTATGTATATCTATAT
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0083999
          3786
          FBtr0084000
          4728
          FBtr0309202
          3734
          FBtr0309203
          3589
          FBtr0309204
          4127
          FBtr0309205
          6705
          FBtr0344316
          5947
          FBtr0344317
          7361
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0083402
          950
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0083403
          950
          FBpp0083404
          950
          FBpp0301141
          950
          FBpp0301142
          963
          FBpp0301143
          960
          FBpp0301144
          973
          FBpp0310708
          955
          FBpp0310709
          657
          Comments

          Extended 3' UTR based on EST and RNA-Seq data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG5685-RA
          Secondary FlyBase IDs
            References (2)