FB2025_01 , released February 20, 2025
Transcript: Dmel\Calx-RC
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General Information
Symbol
Dmel\Calx-RC
Species
D. melanogaster
Annotation Symbol
CG5685-RC
FlyBase ID
FBtr0084000
Feature type
mRNA
Associated gene
Dmel\Calx
Evidence Rank
Length (nt)
4728
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 53 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TCAGTCGCATTCTCAGTCGCAGTCCTTGGCGAAACGCGGCGCGTTCGATCGCCAGACGATTATATTATTTTTTGTTTGTG
CTAAATTTAAAAATCCACGTTAATTTTAGTGTTTCGGCCTTTGACGAGCATAAAGGCTGCGTGAAAAATCACGCTTCGAG
ATCCGTTTGATAAGCTGGGAAATGTGCAGCGGCCCAACTGCGTCAGAGTGTTGAACGTGCCATTGCGAGAATGCCTTCTC
GCGGTCCCACGTCATAGTCACCATCATTAGCACCGGGCCATAACGACATTGGCAACTTGCAACTAGCAACACTCCCATTA
GCAACACTAATTGCAACTGCAGCAGCAACAAGCGACAGCAACAGCAACAAGCAGCAGCAACTAGCAACTGCAACAGCACA
AATCACAGCCAAATCGAACGCAACAAAGCTTCCAGAGACAGGCCAACGGGACAGCGAGTGCCCCAATCACTTCCAGGATA
AGGAGAAGCCATCCCAGTTAGTAACCAGCCATGCAGTTGCTCCTTAAATCGATATTCACCTGCGCACTATTCGTGATCTT
TGTGTATGCCACCGCCCAGTCGCTGCTCAAAGTCCAGGAGACAGAAGCGCGGCAGGCGTACCTTAATGTTACCTCCTCCA
GCAGTAGTAATCTCAGCCAGGACGATGGCCACTTCCTCAGCCGGCGACTAAGGCAGGTCAGCCATGGCGAGGAGGGCGAC
GAGGGCGCGCCGTCCCAAATGGACGACGAGTTGGAACAGATGACCAAGGTGCATGGAGAAGCACCGGACGCGGAGGAGCT
GCGCGAATGTAGCGAGGGTCTTGTCCTGCCACTCTGGATGCCGCAACGCAACATTTCGGTGGGTGACCGCCTCGTCCGCG
GCTTTGTTTACTTCGTCCTACTGATCTACCTGTTTGTGGGTGTGTCCATCATTGCGGATCGCTTCATGGCCGCCATCGAG
GCAATCACATCGATTGAACGGGCGGTGGTGGTCAAGGGACCCAACAACACCAAGCAGGTGATGCACGTGCGCATCTGGAA
CGAAACGGTGGCGAATCTAACGCTAATGGCCCTGGGATCGAGTGCCCCCGAGATCCTGCTCTCGGTTATTGAGATTTATG
CGAAGGACTTCGAGAGCGGTGACTTGGGACCTGGCACAATCGTGGGATCAGCTGCCTACAACCTGTTTATGATTATCGCC
GTATGCATGATCTGGATACCGGCGGGCGAGGTACGGAGGATCCGGCATCTGCGAGTCTTCTTCGTTACCGCCCTCTTCTC
GGTCTTCGCCTATGTGTGGCTGTGGCTCATCCTATCCGTGTTCACGCCCGGCGTGATCCTGGTCTGGGAGGCGATCGTGA
CGTTGCTATTCTTCCCGCTGACCGTGCTGTGGGCCTACATCGCCGAGCGGCGTCTTCTGGTCTACAAATACATGGACAAG
AACTACCGGGTCAATAAGCGCGGCACCGTGGTGGCCGGCGAGCACGACCAGGTGGAGATGGATGCGGAGAAGGGCCCCAA
ACAACCAATGGTCACATCCGCTCGCGGAAACGACGCCGAGGCCTTCGACGAGGCCCGTCGCGAGTACATAACTTTGCTGA
CGGAGCTACGCCAGAAGTACCCCGACGCCGATCTCGAACAGCTGGAGATGATGGCCCAGGAGCAGGTGCTGGCGCGGAGC
AGCAAGTCGCGCGCCTTTTATCGCATCCAGGCCACCCGCAAGATGGTCGGCAGCGGCAACCTGATGCGCAAGATCCAGGA
ACGCGCTCACAGCGATCTCACCGAGGTTAAAGCCCAGCTGCATGCGGGCGATGACGAGGAGGCGGACGATCCCATCCGAA
TGTACTTCGAGCCGGGTCACTACACCGTCATGGAGAACTGCGGCGAGTTTGAGGTGCGCGTGGTGCGCCGTGGCGACATC
TCCACCTACGCCAGCGTGGAGTACGAAACGCAGGACGGCACCGCCTCCGCCGGCACCGATTTCGTCGGACGGAAGGGACT
GCTTAGCTTCCCGCCGGGGGTCGACGAGCAGCGCTTCCGCATCGAGGTGATCGACGATGACGTATTTGAGGAGGACGAGT
GCTTCTACATTCGACTCTTCAATCCCTCCGAGGGCGTGAAGCTAGCCGTGCCAATGATCGCCACCGTCATGATCCTGGAC
GACGACCACGCGGGCATCTTTGCCTTCACAGACTCGGTATTCGAGATCACGGAGTCCGTCGGCCGGTTCGAGCTGAAGGT
AATGCGCTACTCCGGCGCCCGCGGCACCGTCATAGTGCCCTACTGGACAGAGAACGACACGGCCACCGAATCCAAGGACT
ACGAGGGGGCCCGCGGCGAACTTGTCTTCGAAAACAATGAATCCGAGAAATTCATCGATCTGTTCATCCTGGAGGAGAGC
AGCTACGAGAAGGATGTCAGCTTCAAGGTGCACATCGGAGAACCTCGATTGGCGCCAGACGATGAATTGGCAGCCAAAAT
CAAGGAGGTCGAGAAAAAACCCGTTCAGGATCTGACCGAACTGGATCGCATCCTGCTGCTGAGTAAGCCGAGAAACGGAG
AACTGACCACCGCATATGTGCGCATTCGAGAGAGCCAGGAATTCAAGGCTACAGTCGACAAGCTGGTGGCAAAAGCGAAC
GTTTCTGCCGTCCTTGGCACTTCATCGTGGAAGGAACAGTTCAAAGATGCCCTCACCGTTATCCCAGCCGATGAAAGTGA
GTTTGATAACGATGATGAGGAGGAGGAGGTGCCCAGTTGCTTCAGCTACGTGAGCCACTTCGTCTGCCTCTTTTGGAAGG
TTCTCTTTGCATTTGTGCCGCCCACTGACATTTGCGGCGGCTATGTTACCTTTGTGGTATCCATATTCGTGATTGGCGTC
ATCACTGCCATCATCGGAGATGCCGCCTCCTATTTCGGCTGCGCCCTCAACATCAAGGACTCGGTAACGGCCATCCTGTT
TGTCGCCCTGGGCACAAGCATACCAGATACATTCGCCAGCATGATTGCCGCCAAGCATGACGAGGGTGCCGATAATTGCA
TCGGCAATGTCACGGGCAGCAATGCGGTCAACGTGTTCCTGGGCATCGGCCTGGCCTGGACCATCGCCGCCGTCTACCAC
AGCTCCCATGGCATGACCTTCAACGTGGAGCCGGGAACCATTGGATTCGCCGTGGCGCTCTTCTGCGGCGAGGCCCTGAT
TGCCATAATGCTCATCATGTTCCGGCGCTGGCACAAGGGCATTGGCGCCGAGCTGGGCGGTCCGAAAGTATCGAAGTACA
TCAGCGCAGCGATCCTGGTATTCCTGTGGGTGTTCTACGTGGTTATATGCATACTGGAAGCCTACGACGTCATCCGGGTT
TAAGGAGTTCGCAGCCGCGTTGGTTTGGCTTTGGCTTGATTATTCGCAATGGCGTTGGACTTTTCCGTCAAATTGAAGAG
GATCGTTACGGCGGAAAACAGAGCTAACCGATACTTAGAAGCTATTGAAAGATGCTGTAGATGCAGTTTTTATATGTAAA
CTTATGAAATTGATTTATATATATATGTGCTCGGCGCGATATATAAATATTTCTTGTGTAAAATTTATGTTAATACTAAA
AGTAAAATTTAAAAGTTTAACTAGGTTTAAGCCAGGCTTATATACAAACCATTTTTACGATTATTGTCTCTATTCATATA
TGAATTGTAAATACAGAAAGGCTGCCACGGCTCAGCAATCTTGTAACCGTAACGAGATCATTTACTGTTATGCCATATAT
ACTTAATTTACTTTCTAAAGAATACTATTATATTTATTATATCATTCTGTGTATAACTTAAGTCATTGTTGTTGTTTGTT
AAAGCTGTACTTAATCGACCCCATAAAATCAAAACGGGAAAATCGGAATCGATTTAGAGTTTAAATCGTGTTCCGTACTC
CAAACTCGATATTGTCTCTCCATTTGCCGAAAACCATTGTTAATTTAATACATGTGTAAGTTTTAGGAAAGATCTAAAGG
TTTTAGCCAAGAAGAAACGCAGTCCCTCTAGCCATCTACTACAAATACTACAATTATAACTACTACTACTGATTAGGGGC
CTCCTTGACAACTAGTTCTAGTCACCTCACACTATCGACACAAGTCCAACTAGCAACACTTTCATTAACTCTGACCAAAG
CAAAAGGCGGCACTACTTACTAGCGATTAGCTGTTAGCGATTAGCCAGAAAGACCATCAGTGTGTCCACACTGCACTATG
AAGAACTACACGTACTACCAGTGAGCACTAATCAATTTACTTAAAAAAAGACTTTCTATTCGCTTACGTCGCTGGTATCG
AAGTAGACAAAACTGGATATTAAGGCAAACACCAAAACAATAGCGAAATAATAAGGAGAATTACTAGAATTGATTGTAAA
CCAAATGTAACGAGCAGGTACATATTTTTTGTATAATGTACTATTTTTCATATAACAAAATTGTAGCAAATTAATGGTGA
GAAGAGAAGCCTAATGATATTTATAGCCACATGCATAAATTTGTATTATATATTTGGGGTCACACAACTGTACGGGGAAC
TCGTTGAGAAAACTGCGCCAAATTTAGACGTAATTGATTATTAATTACTGCATATACGAACTATTAAACAATTTAATAAA
TATACAAACATGAATAAATAATAATGTACTAAGTTATACTGTCAACGTTTACTGCTAGATATTATAATTAAATTTCTTTT
TAAATTTA
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Calx-RA
        FBtr0083998
        6137
        Calx-RB
        FBtr0083999
        3786
        Calx-RD
        FBtr0309202
        3734
        Calx-RE
        FBtr0309203
        3589
        Calx-RF
        FBtr0309204
        4127
        Calx-RG
        FBtr0309205
        6705
        Calx-RH
        FBtr0344316
        5947
        Calx-RI
        FBtr0344317
        7361
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Calx-PC
        FBpp0083404
        950
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Calx-PA
        FBpp0083402
        950
        Calx-PB
        FBpp0083403
        950
        Calx-PD
        FBpp0301141
        950
        Calx-PE
        FBpp0301142
        963
        Calx-PF
        FBpp0301143
        960
        Calx-PG
        FBpp0301144
        973
        Calx-PH
        FBpp0310708
        955
        Calx-PI
        FBpp0310709
        657
        Comments

        Extended 3' UTR based on EST and RNA-Seq data.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG5685-RC
        (FlyBase, 1996-)
        Calx-RC
        (FlyBase, 1996-)
        Secondary FlyBase IDs
          References (2)