FB2025_01 , released February 20, 2025
Transcript: Dmel\sm-RJ
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General Information
Symbol
Dmel\sm-RJ
Species
D. melanogaster
Annotation Symbol
CG9218-RJ
FlyBase ID
FBtr0304653
Feature type
mRNA
Associated gene
Dmel\sm
Evidence Rank
Length (nt)
2379
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 22 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      ATTCGTCTGTGAGACGTCTTACCGTAAAGTACACCTAGGAATACTCAATCCACAAATATATAAAATAAAAAAATCACAAA
AAAAACTGAACATAAAATTTGTGTTGTGTGTTACATTAAACAGTGTTAACTTTTACCGTGTTACCGACAATTGCTTCATT
GCGTACATTGGCTTCGTGTTAACTAGTTGATTTTCGGCTGCCCAGAATTAACCCTTAAAGAATCTTTCTAACAATTTTCA
CTGCCGATCGAGTGGTTCTGATTTGTGGCCTTAAGACCCAATTAAATCAAGTTGCTGCAGCATGAATAACCTGAACGCGA
ATGCCAGTGCCTTTTTGTGGCAGGTACCGCCGCCGCAGCAGTTGACCCCTCAATCGGTGCAGCAGCAGACGGTGCAGTCG
GTGCAGTCCATGCAGTCCGTGCAGCATAGCCAGCTGCTTCAATCCGCTGTAGTCTCGCAGCCGCGCAAGTTTGGTGGCAA
CAAGAGCAACTATAACTACATGCAGAATCATGCCATTATGGGTCCGGGCGGCGGTCCAATGGGTGGGATCGGTGGCAACC
CTAACATCTACCGAAAGCGCCATTCTATCAACACCTACAATGCTGGCTTATATCAAACCAATGTAGCAACACTGTCGACA
CCACAACAACATGTTTCCCATCAACACCACCACCACCTCCGCCAACAACAACAACAACAACATCAACAACAAGCACCACA
ACAACAACCACATCCACAACACCTTCACCACCAACAACAACTAGTTGCCCCAGCTCAATCGCACAATCTTTATCAATTTA
AAGAACCACCGCTATTGGGACCCGGAGCCGCTTTCCCACCATTCGGAGCTCCCGAATATCACACCACCACACCGGAGAAC
TGGAAGGGGGCCGCCATCCATCCCACTGGCCTGATGAAGGAGCCCGCTGGTGTTGTGCCCGGACGCAATGCTCCGGTGGC
CTTCACACCGCAAGGACAGGCTCAGGGCGCCGTCATGATGGTCTACGGCCTGGACCACGACACTTCCAACACGGATAAGC
TCTTCAATTTGGTTTGCCTGTACGGCAACGTGGCACGGATCAAGTTCTTGAAGACCAAAGAGGGCACCGCCATGGTGCAA
ATGGGAGACGCTGTGGCCGTTGAGCGTTGCGTGCAGCACTTGAACAACATTCCCGTGGGCACTGGTGGCAAGATACAGAT
CGCTTTCTCCAAACAGAACTTCCTATCCGAGGTGATCAACCCGTTCTTGCTGCCCGATCATTCGCCCAGCTTCAAGGAGT
ACACCGGCTCCAAGAACAATCGTTTCCTATCGCCGGCCCAGGCGAGCAAGAATCGCATTCAACCACCGAGCAAGATTTTG
CACTTTTTCAACACACCGCCCGGCTTGACCGAGGACCAACTGATTGGAATCTTTAACATCAAGGATGTGCCCGCCACATC
GGTGCGCCTGTTCCCCTTGAAGACCGAGCGCTCGTCGTCGGGACTGATCGAATTTTCCAATATCTCGCAGGCAGTGCTGG
CTATCATGAAGTGCAACCATCTGCCTATTGAGGGTAAAGGCACCAAGTTCCCATTCATCATGAAGCTGTGCTTTTCCTCA
TCCAAGAGCATGAACGGCGCCTGGAACAATGCGGCCAGCGAGGGCATGATCGAGAAGGAGAACGAGGTGGATACCAAGGT
GGACATCTACAATTGAGATTTGATTACGATTGTGTAAGCAAGCAAACAACAACCGGCTTAACTAGAACACAATACAGAAC
AACACTGGGGATATGGGTCGCAAACAACGTGCAGAAGACAACAGCAACAGCAAAATCAGCAACAAATGCGTCACCAACTG
CACCAAATGCTGAAACTTCAACTACAGATCCACTACGATCCACCAACTTGATGGCTTACACATTCGACAAGAAAAGCGGG
AATTTCAAACAAATTGATTGCTAAATCAATTAAACAAACCAACAAAAAATGAAATGATAAATGATAAACATTCAAGAAAA
AGGAATTACACTTAGGCGCAAACGCATGTAACTTTTCTACGAGCCATTTGCATAGATTTACTGAATTCCACCATATATCA
ATTCAGCTAGTTAGTATGACAGCCTATGTACGATATGGCCTCGTTTAAAAGCCACACCAAAAGAAAACACACTTAATGCA
CATTACATTACATTGAATTACATGCGTTTGCGTTGCAACAAAACAAGCAAAATAATACAAAAAAAAATAATTGTTATTAT
TGTTACAATGAAGCATTAGGACTTTCTCACACAACAGCAAAAAAAATGGAATCACTCCAACCAATTGTAAACTATGTATT
GTTTAATTGATAAAAAACGACAAACTAAACCAAAAATAAATAATTGTAATTCAAAACTC
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      sm-RA
      FBtr0086492
      2995
      sm-RAA
      FBtr0308797
      15139
      sm-RAB
      FBtr0310331
      14827
      sm-RAC
      FBtr0332857
      1299
      sm-RB
      FBtr0086495
      1783
      sm-RE
      FBtr0100232
      2330
      sm-RG
      FBtr0110898
      1230
      sm-RH
      FBtr0301609
      3010
      sm-RI
      FBtr0301610
      1831
      sm-RK
      FBtr0304654
      3175
      sm-RL
      FBtr0304655
      3046
      sm-RM
      FBtr0304656
      15106
      sm-RO
      FBtr0308785
      8932
      sm-RP
      FBtr0308786
      2872
      sm-RT
      FBtr0308790
      3226
      sm-RU
      FBtr0308791
      15344
      sm-RV
      FBtr0308792
      3190
      sm-RW
      FBtr0308793
      1179
      sm-RY
      FBtr0308795
      1251
      sm-RZ
      FBtr0308796
      2378
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      sm-PJ
      FBpp0293195
      464
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      sm-PA
      FBpp0085681
      475
      sm-PAA
      FBpp0300954
      508
      sm-PAB
      FBpp0302014
      509
      sm-PAC
      FBpp0305079
      301
      sm-PB
      FBpp0085684
      404
      sm-PE
      FBpp0099612
      475
      sm-PG
      FBpp0110198
      260
      sm-PH
      FBpp0290824
      480
      sm-PI
      FBpp0290825
      420
      sm-PK
      FBpp0293196
      535
      sm-PL
      FBpp0293197
      492
      sm-PM
      FBpp0293198
      497
      sm-PO
      FBpp0300942
      494
      sm-PP
      FBpp0300943
      434
      sm-PT
      FBpp0300947
      552
      sm-PU
      FBpp0300948
      515
      sm-PV
      FBpp0300949
      540
      sm-PW
      FBpp0300950
      260
      sm-PY
      FBpp0300952
      260
      sm-PZ
      FBpp0300953
      491
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      sm-RJ
      Secondary FlyBase IDs
        References (0)