A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\Rpn8-RB

General Information
Symbol Dmel\Rpn8-RB Species D. melanogaster
Annotation Symbol CG3416-RB FlyBase ID FBtr0330237
Feature type mRNA Associated gene Dmel\Rpn8
Evidence Rank Strongly Supported Length (nt) 1456
Evidence Score 15
Map ( GBrowse ) GBrowse View Help detailed view FBtr0332921 FBtr0072366 FBtr0072363 FBtr0290019 FBtr0072364 FBtr0332925 FBtr0100470 FBtr0072290 FBtr0330237 FBtr0072362
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 191 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence
CACACTGTAAATCGTTTCTGCTTGTCATTTTGGCCTGAGTTTTTTGCCGC
AAATTGCAGGTAATTTAGCGAAAAACAGGAGTCGCAGGAAGCCAAACCCG
TCGAAAACAAATCAGTCCGGTACCTATCAATCGGCGCAGAGGTCATAGTA
AGCCCCCGAACCGAAAACCCAGAAAAAGCACAAACATGCCGTCGCAGGAG
GTGAGCGTAAACAAAGTGATAGTGCATCCATTGGTTCTGCTGTCCGTGGT
GGATCACTTCAACCGGATGGGAAAGATTGGCAACCAGAAGCGCGTAGTGG
GAGTCCTTCTGGGCTGCTGGCGATCCAAGGGAGTGCTCGATGTGTCCAAC
AGCTTCGCAGTGCCCTTCGACGAGGATGACAAGGACAAGTCGGTGTGGTT
CCTGGACCACGACTACCTGGAGAATATGTACGGCATGTTCAAAAAGGTGA
ACGCCAGGGAACGGGTTGTGGGATGGTATCACACAGGTCCCAAGCTCCAC
CAAAACGACATAGCCATCAACGAGCTGGTCCGGCGCTATTGTCCCAACTC
CGTGCTGGTCATCATCGACGCCAAGCCCAAGGATTTGGGCCTGCCCACAG
AGGCGTACATATCGGTGGAGGAAGTCCATGACGACGGCTCTCCGACCAGC
AAAACTTTCGAGCATGTGCCCAGCGAGATTGGCGCCGAGGAGGCGGAGGA
GGTGGGCGTGGAGCATCTGCTGCGTGACATCAAGGACACAACCGTGGGCA
GCCTGTCGCAAAAGATCACCAACCAGCTCATGGGTCTGAAAGGCCTGAAT
GCCCAGCTGCGGGACATAAAGCAGTATCTGCAGCGCGTCGGCGACAGCAA
GATGCCAATCAACCACCAGATTGTCTACCAGCTGCAGGACATCTTCAACC
TGCTGCCCGATATAACCAATGACCAGTTCACGGGCACAATGTATGTGAAG
ACCAACGACCAAATGCTAGTCGTCTACCTGGCCTCCATGGTGCGCTCGAT
CATTGCCCTGCACAACCTGATCAACAACAAGCTGGCCAACCGCGACGCCG
AGGAGGGCAAGAGCGACAGCAAGGAGGCCAAGGAGAAGAATAAGGATAGC
AAGGATAAGGACAACAAGGAGACCAAGGACAAGGACGGCAAGAAGGCGGA
GGAGAAGGCCGACAAGGGCAAGGACGAAGGCGGCAAGGGTTCGCGCAAAT
AGGAGCGGAAGAAAAAGCGCAAACCCCGTCGCAAACGAAAGAAGCAGCGG
GCGCAGGACTAGCTGCTGCTTCTTCTGTTCTCCAGGAAGTGGAACTCATC
TGCAGACCATACGGCGAGGGTGTGCAGTGGCCTCAGAAATCAAGCATTGC
TACCATTCATCGTTCATTTTCCACACGAAATTAAGCTCCCTCTTATTATT
TCGCGTAACTAACTAATGGCAAGTTTATGTAATTAAAAATTAAATAATTT
AAATAC
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0072290
1456
FBtr0332921
1473
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0303270
358
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0072197
338
FBpp0305141
338
 
hide Comments
  • Stop-codon suppression (UAG) postulated; reflected in aa sequence of predicted polypeptide.
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
hide Synonyms
Mov34-RB
 
Rpn8-RB
 
hide References ( 1 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]