Transcript Dmel\CG42342-RR

General Information
Symbol	Dmel\CG42342-RR	Species	D. melanogaster
Annotation Symbol	CG42342-RR	FlyBase ID	FBtr0336780
Feature type	mRNA	Associated gene	Dmel\CG42342

Evidence Rank	Strongly Supported	Length (nt)	3631
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 62 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	IP04510 LP23076
End(s) extend beyond the annotated transcript, internally consistent	IP04710
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	42405 50846 108034 281260 EK176834 EK234061 EK306115 IP07619 IP07819 RP004060083 RP004099686 RP004110231 RP004124080 RP004125280 RP004129330 RP004132854 RP004133257 RP004182050 RP004188838 RP004199949 RP004200970 RP004204247 RP004204951 RP004226215 RP004228389 RP004229370 RP004230318 RP004232245 RP004235374 RP004237569 RP004239260 RP004239762 RP004246438 RP004247588 RP004251965 RP004253283 RP004256122 RP004256168 RP004258030 RP004261310 RP004269561 RP004303930 RP004425455 RP004466246 RP004472244 RP004481902 RP004490202 RP004526199 RP004529949 RP004532954 RP004546302 RP004553340 RP004553567 RP004553877
End(s) extend beyond the annotated transcript, internally consistent	78850 214403.36 EK045357 EK206221 EP11428
Sequence
	GCCAAAAGCGTTGTATATGTTGCCCAGTGCGGACGTGTTTACGTGTCGGA CAAAAATTCGGGAAATCGGTAAAATTCGCATTTCTGAGGGTCTCGGGCTC CTATCCTCCGGGCGTGTGTTCTTCCCCCGCAACCTTTCCGTTGTCCTTTA CATAAGGATAAGCGGGCGATAGAAGAAAATAGAAAGAAGGAGCCAGAATG TTTTGAGCAACAAAAACAACTTCAGTGTTGAATGTGTGCCAAGTGCAAGG AGTTGTAATTTATAGTTGCCGAAATTAAATTATGTTAAGTGCCCCACCAA ATCAGTAAGAAGGTGCAGTGAAAAGGAAGCGGCACGAAACAGCAAGCGTG GAAAAGGCGAACATAAAGAGTTAGCGGAGCGCAAAAAGTGGAAAAAAGTA TGTTGAAAAGTGAACGCAGAGCTAAATAAGTTGCAATGTGAAGAGCCCTG AAAGGACAAGTGCGAACCGAGGAACAGGACTTGTCGACGACTGGCAGTAC CAGCTGCCACAGCAGCGATTGACAGGACAAAAACAAAGCCCAACTAGCTG AGAGGACTTCGCGCTCGAGTGGCACGAGCAGCAAAAGTTTAGCGTTGTTT TTCCGTTCCATGGCCCACGGAAAACTGCAGCAGCAACGGGGCGCAATGTT CTGGCCAACTACCGCAGTCGAAGAATAGAAAATCACTCGAAGGCCTTGCC CAAATAAAAAGCGTAAAAAAGCAAGTAGAGACGAAAATAAACAAAAAAAA AAAAAAAAGGACAACCACTGCGGTGCAGCATATGTGCTTTTTTTCTGTGA TGCCACAAGGACACAAGGACACTTCAAGTGACAGCAACATACGCGAGTTT TTCGTTCGTGGAGAGCCTTCCAACTAAGACGCAGCAGTATGCGCAAGCAC AAAGCGCCGCCCAGCGGCAGTCCAAGGACAATGGCCCAGGACAATTCGCA ATCGGAGCCATCGGGTGGTAACGGGGAATCACCCGCAGCAACAACAGCGG CAGCCGCATCCGTGGAAGCCCCACAGCAGAGTCTGCTACTGGGCCACAAT GCAGCGGATGCCTCCGCAGCAGCAGTAGCTAGTCGCCTGGCCCCGCCCCC CTGTCAGCATCCCATTAACAACAGCAACAACAACAGCAACATCAGCAACA ACAGCAGCAACAGCAGCAGCAGCAAGGAGCGACCTCGCCCCACAGTCCGG TTCATATCCCTGCTGCACGTGGCCAGCTACGTGCTGTGCCTGTGCGCCTT CAGCTTCGCCCTCTACGGCAATGTGCGGCAGACGCGGCTGGAGCAACGGA TGCAGCGCCTCCAACAGCTGGACGCCCGCATCGTAGAGCTGGAGTTGCGA CTGGAGCAGCAGCAGCTGCTCCACTGGCCCGCCGAACAGACCCAGGTCCT GGCCAGTCATCCCAGCGACAGAGACAGTAGCAATAGCAACAACGGCAGCC AGCACCTCGAGTTGCACGTTCGACGGGAGTTGCACCGTCTGCGACGGGAT GTTTCGCATCTGCAGCTCACGAGACGCCAGCAGCGACGACAGGCAGCAGA GGCGGCGGCAGCAGCGGCCAGCGGAGAGGGAGGATCCGGAGGTGGGCAGT GCCAGTGTCAGCCAGGTCCTCCAGGTCCGCCGGGTCCACCGGGAAAACGA GGGAAGCGCGGCAAGAAAGGAGATAGCGGCGAGAAGGGCGATCCGGGCCT GAATGGCATCAGTGGGGAGAAGGGCGCGGCGGGCAAGCCCGGTGACAAGG GACAGAAGGGCGATGTCGGCCACCCCGGAATGGATGTCTTCCAAACCGTG AAGGACTTGCAAGAAGCAGGCGTCAATGTATCCGCTTCCACAGTCATAAA GCTGAAGGGAGAGCCCGGTGAGCCGGGCCCGCCAGGACCTCCGGGCGAAG CGGGACAGCCGGGTGCGCCGGGCGAGCGAGGACCACCAGGCGAAATCGGA GCGCAAGGACCACAGGGCGAGGCCGGACAGCCAGGAGTCGCAGGACCGCC CGGCGTTGCCGGTGCACCTGGCACGAAGGGCGACAAGGGCGATCGAGGCG ATCGTGGACTAACCACAACCATCAAGGGTGACGAGTTCCCCACTGGCATC ATCGAGGGTCCGCCGGGACCAGCGGGACCACCTGGTCCGCCTGGAGAACC GGGAGCTCGAGGAGAACCGGGACCCATTGGACCTGCAGGACCTCCCGGCG AGAAAGGACCGCGCGGCAAACGGGGCAAGCGGGGTCCTCCGGGCTTGGAT GGCATGAAGGGCGCCCAGGGCGAGACGGGACACAAGGGTGAGCGCGGGGA TCCGGGACTGCCGGGCACGGATGGCATTCCCGGGCAGGAGGGGCCACGCG GGGAGCAGGGCTCCAGAGGGGATGCCGGCCCGCCCGGCAAACGGGGACGG AAAGGAGATCGCGGTGACAAGGGCGAGCAGGGCGTGCCCGGACTGGACGC CCCCTGCCCCCTCGGCGCCGATGGGCTGCCGCTGCCCGGCTGCGGATGGC GGCCGCCAAAGGAGCCAATCATCTCGACGCCCGTGCACAAGGATTATTTG CCCGATGTAACGCAGCCGGAAAGCAACACCAGCGATTACGAGCAGGAGGA GGAGGAGGACGACGAACAGGCGGAGGATAATGAAAACGAATATGATGAAT ATCAGGATAATTTGCATAACAATGAGTGAAAAAAGGAAGCAGTCAGCCAG CCCAGTAAATGGCAAACACAGGCGCATAAAGGCGAACAGACCCTAAGAAC CAACGTCCTTCCTACCTACCACCATGCACCATCAACAGCAGAGACACCAC CAACACACAGGCACTTGCACTGGTACAGAGACAGGCTCACGCACACCGAC ACAGACGACTAGTTAAGCATTTCCGATTTCCGCTACGAGTCCTGGCTCTG TTTCGCTCTGTTGACATTTGCAATTAGCGCTAACAAATGCCAAGTGGCTG CTGCGTCTAACGGTTCTGCAAAGTAGATGCTATTAGCATACTCTATCTCT GTCCTTAACCCTATTCCTCACTCACTCCCTCTGCCTTACGCACACGCGCA CGCACACAATTATCCTTTGGTTTGGCTAACACACACGCTGGCTTAGTTTG GTGACGGGTCCTGGCTCTCTCTACCATTACAACCATCTCTATCACTCTCG CTGAAATTCGCTCATCCAACTGCGGCCGTTTCTGGCTGAACTTCTGTCTC GCCCCTAGCAGGAAAACTGGCAGGCCTGGCTCAAGGACGAGCTAAATGCG CTGCAGCATCCGCGCTCAAAAAACTAATTGCCAGCGACCACCCCTCGGCG GCTGCAGCAAAGGAGTGGCCCGGCAATATCCACATCCATCTAAGCGCTTT GGTTATAATTTTAGTAACTTGTTATTGTTAAATGTAGACATCGAACCGAG CTATAGCTGCTACATCCATTGCATAAAAACATCCTATCATAAGCACTGTA TAATCTGTATCTGCATCTGTGCCAAATTGCTCCAGGTTGCCTCCAGTTCG GCGTTTCCGGCCCCTCGACGTCGCAACCTTTAATTATAGTTTTACCTTAC CTACTACTATATAAATTGTATCCACTACAGCTGTATCGAATACTTTAAGC AAGAAATAAAACCAGCTATTTTTACAACAAC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) CG42342-RD FBtr0299894 4309 CG42342-RH FBtr0303650 4336 CG42342-RK FBtr0305005 4240 CG42342-RL FBtr0305006 4255 CG42342-RM FBtr0336775 5659 CG42342-RN FBtr0336776 5644 CG42342-RO FBtr0336777 3540 CG42342-RP FBtr0336778 3555 CG42342-RQ FBtr0336779 3646 CG42342-RS FBtr0336781 4267 CG42342-RT FBtr0336782 4282
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) CG42342-PR FBpp0307756 596
Derived from OTHER transcripts	Name FlyBase ID Length (aa) CG42342-PD FBpp0289172 822 CG42342-PH FBpp0292667 831 CG42342-PK FBpp0293542 799 CG42342-PL FBpp0293543 804 CG42342-PM FBpp0307751 670 CG42342-PN FBpp0307752 665 CG42342-PO FBpp0307753 765 CG42342-PP FBpp0307754 770 CG42342-PQ FBpp0307755 601 CG42342-PS FBpp0307757 808 CG42342-PT FBpp0307758 813
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001275711
Synonyms
	CG42342-RR
References ( 0 )
	No references are recorded in FlyBase at present.