FB2025_01 , released February 20, 2025
Transcript: Dmel\Trf2-RF
Open Close
General Information
Symbol
Dmel\Trf2-RF
Species
D. melanogaster
Annotation Symbol
CG18009-RF
FlyBase ID
FBtr0300577
Feature type
Associated gene
Evidence Rank
Length (nt)
9866
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 40 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          GCTCAAAGTGAAACGGCCAAACGAAGAAGACGTATCGTGTGTGCTCAGACTTGTGCTCTCAAAATTTTTGGTCAACTACA
          TTATTCAGCTCTGAGTTTTAACTAAAAAAGATCACAAGCCAAAAAAAAAAAAAACAAAGAGAAACCTAAAGAAATATCAA
          CCAAAAGTGTGCAAAATCCAAAAGATTCTACAATCCGAATCGAAAACAAAAACATAAGAACCACAAAAGCAGCAGCAGAA
          AGAGACACAGAGAGCAGCGAAAACTTAACTGCGAATTCAGCGGCTGAAGCAAAGCAGCGGAGCCCAAGTGCAAGCGAGAC
          GGCAGCAGAGCTCCGCTGCAAGGCAACGGGATAGAAAGAGAGATAAATAGAGAGACAGCGCAGCAGCGATATAGAGTGAG
          AGCAGGCGGGAGAGCGAGTAGCGGCAGCGACAGCAACACAGCCACAAAAGAGATCGTGAGAGGGAGGGAGAGCTAGACGA
          CGACCTACTACACAAAAAAAGACTGCTAAACGGAACAACTAAAAACTACAAGCAAATTTAACCAGGAGAAAAGAACGGAA
          GACTAGACATAATCATAAACATAGTAGATAGAATTAGAGAACCAGCAAACCCAACAACTAGAACACTAAGAAAACATTAA
          TTCTAATACAAAATCACACATAAAAAAGTATTTTTTGGCCTTAAGTGCAAACATACTCACATACAAACACATACATACAC
          ATCCACATGAACGAAACAATGGAAAGAATGTAATACAACACCAAGGAAGAATCACCTTTAGCCTTATATACAATTAAATA
          TAATTAAGAAGCTAGCAAGAAAACGCAGAGCAAGAGTCCTATCAAGAAACCCAAAAAGATAACAAGAAATATTTTTTTAA
          CGATGGGCAGTGCCGTCAAAAAGGGGGATGGTTCCCCGACTCGAATACTTGAAGAATACCAAGTAGCTAGAGACTTAAGG
          AACGAGGATTTGTTTCCGGAACATCCGGTTGAACATCCGGACGAAGATTCGGATAAGGAGAACCAATCGCCGAATCAATC
          CCCCAATCCAAGAGCCATCGGTGATTGTGAGCAAGGACCTGACATTGGTAAAGATACTCTAAATCCCAACGAAGCTGACC
          AGTTTTCGAGCGAAGAAGTTGAGAAGAACGAAGCCAACAGCAGCTGTAACGAGTCGGGCGGGGATGCTCGCAATTCTAGA
          GATCGTTTAAGTTCCTCTCATAGCGAGGACGAACAGCTTAACCAAGAATATTCAACTTCATCAAGCGGAAGCACCATCGG
          AAATCGTGAGCAAGGCTCTGACGTTGGTAAAGATACTTCAAGTCGCAACGAAGCTGACCAGTTTTCGAACGAAGAAGTTG
          AGAAGAACGAAGCCAACAGCAGCGGTAACGAGTCGTACGGGGATGCCTGCAATTCTAGTGATCGCTTAAGTTCTTCTAAT
          AGCGAGGACGAACAGCTGCACCAAGAATATTCAACTTCATCAAGAGGAAGAACAAGGGAATATGCACAATCTGACTTGAA
          TCCCGGGTACCAGGACTTGAATATCGGTAACCAGGACTTGAATCAAGTTAATCGCGAGTACCAGGAGTCTAATAACGAGT
          ACCAGGTTTCAAACCAAGAGTACCAGCACTTGAATACCGAGTACCAGGAGTTGAATCACGGCGATCAGGACTCAAATGAC
          GAGTACCAGGAGTTGAATCACGGCAACCAGGACTCAAATGACGAGTACCAGGAATCAAATCACGGCAACCAGGACTCAAA
          TGACGAGTACCAGGAGTTGAATCACAGCAACCAGGACTCAAATGACGAGTACCAGGAGTTGAATCACGGCGATCAGGACT
          CAAGTGACGAGTACCAGGATTTGAATCACGTCAACCAAGACTCAAATCACGAGTACCAGGCTTGGAATCACGAATACCAG
          GACTCAAATCACGAGTATCAGGCCTTGAATCGAGAGTACCAATATCCTGAATCTGATGAGGAAGAGGCCGCTAGAAAAAG
          AAACATATATACCCGTTTACGATCCTACGCTTGTCAGGTACATCTCCCTCGTTTAGGAGAATCAGAAGTTGATAGCGACG
          ATCGTCGCCATAACCCAATCAATCAGCCATTCAATCAGCCAATCAATAGGCCAAATCAAAAATCGGATTCATCTTTAGAG
          TCATCTTCGCCGGAGAGACAAGACTCTGAAAGCGAGTCGCGACAAGCTTCAGATGAGGAATCGTCTTCTGGGGACTCGGA
          CTACTTAATCGATCCAGTTACTGGGTGGCTATCGCGCCGGCGAGAAACTTCTACCGAACGCGAGGAAAAAAGCGACCAAA
          GCCAACAGGAGTCGTCAGAGGAAATTACAGACGAACAGAAGGAAGAAAGCGACGACGTCGAACAACAGTCGCCGGCTGAA
          CATACTTCTTCTGATAGACGCGATCATTCGCCAGACAAGCAACAGAATAAGCGAAAATCGTTAGGCACTGGGAATTCTTC
          GTATTCGAAGAAACCATTATTGGACGGTGACAAAGGAGACCCACGTTCACATTTATCGTCTCTGGGAAGTCGCAGATCCT
          TAAAGCGTAAATGGCCTTTTGATTGTACAGACTCTAAGAAATTTAAACCAAACTTGCAGAGTGAGGAAGACAAATCTGAG
          GAGGAAAAACGTGAAGATACGGAAAGCGAATGCTCTGACGAAGAAGACTCAGATAGTTCAAGTTTCGATACAGATTCAAA
          TTCAGATTCAGATTCAAATTTAGATTTAGATTCCGATTCCGATTCCCATTCCGATTTCGAATCATCTTCAAGTTCTGAGG
          AATCTGCCCAGGATCCAGCTCCTGAAGGCGAAACCGATCAAGATCCAGCTCCTGAAGGCGAAGCCGATCAAGATCCAGCT
          CCTGAAGGCGGAGTCGATCAAGATCCAGCTCCTGAAGGCGGAGTCGATCAAGATCCAGCTCCTGAAGGCGAAGTCGATCA
          AGATCCAGCTCCTGAAGGCGAATCCGATCAAGATCTAGCTCCTGAAGGCGGAGTCGATCAAGATCCAGCTCCTGAATTCG
          GAACCGATCAAGATCCACATCCTTATTACAACGATCAGGATCCAGCTCCTTATTACGACGATCAGGATCCAGCTTCTTAT
          TACGACGATCACATTTGTGATTCTGAGGAGGATTATAAACCATTTATCTTCTCAAAGGAAAGGAAGTTCTTGAAATTCGT
          AACAAATCCTTTAGGGGATGATAAATCTAGTTTGGACCTTAGCATACAGCTCTATAAGGTATTTGGAGCTTACAAACTGG
          AAGACGTATACAGCAGTATTGATGAGGAAGGCCAACCAGAACAGGACCTGCAACTGAAGCAGCAACAGAAACATTTAAAA
          AAATATCAAAAGTTGCAACTGGTGGTATTCTGGCACCAGGAGAAATTCTTTTCAAAGGAGCAACTGTTGCTATATGAGTA
          TCTGAAACTACTTTTGCAGAAATTCTTTCCACAAGAGCAACAGGAGAAACGGTTGCAACAGGAGAAACTTTTGCAACAGG
          AGAAACTCTTGCAACAGGAGAAACGGTTGCAACAGGAGAAACGGTTGCAACAGGAGAAACGGTTGCAACAGGAGAAACGG
          TTGCAACAGGAGAAACGGTTGCAACAGCAGAAACTCTTGCAACAGCAGAAACTCTTGCAACAGGAGAAACTCTTGCAACA
          GCAGAAACTCTTGCAACAGGAGAAACTCTTGCAACAGGAGAAACTCTTGCAACAGGAGAAACAATTGCAACAGGAGAAAC
          ACTTGCCACAGGAGCGACAGTTGCAACAGGATAAAGTCTTCCTACAGCTACGACAGTTGCAACAGAAGAAAGAACTGGAG
          GAGCAGCGAGAGCGAAAGCGCCACCTCTTTGAGCAACAGAAACAGTTTGTCCTAGAAAAATTGCGCCAACAGAAGGAGCA
          GCATCGTCGTCAGCAAAATCGCGTAAAACGCGAACGTAAATTGCGCCAGAAAAAGGAGAAACAGCGCTTGGAATACGAAC
          GATTCTTGAAGGAATATAGGGAGGACTGTAAACGTCAGTTGCGTTTGCAGCGCGAGCATTATCTGATCAAGATTAAGCAG
          CTGGAGAAGGCCAGTCAGCGCTCGTTGAAGGGGAATCGAAAGCACAAGCTGATGCAAAACGATATGGTCAGCATACCGGT
          GGCCAATTTGAACGGCGGCCTTAAAGCGGCCAGCAGCGGTTCCGGAGTTGGTGTAGTGACCTCCGGCGGCGTCGTATCCT
          CGGCGGTGCTGGCCAATGCCCCACGTGTATACCTAACGCCCTCCTCCACATTCATGACCAATCGCCAAATGGCGGGAGTG
          GCGTCCACCGGAAGAATGAGCGGACAAGTCGTCGGTGGTTCATCTGGCACAGCCTCAACAGCCGGTACCGTTCGCTATTT
          TTCGCAATTCAGCAAAATGCAAACGGCCGGCGGACCCAGTTTGCAAAGGAAACTTGCCAACGGGGATACCATTGTTCTGG
          CAACCGGCAGTAAAAATATGTTCCTTACTAGCAGCGAAAATAAGGCTAATCTGCCGACCGTCGCCAGCAATGGCAATGGT
          CTGATCACAGCCAAAATGGATCTATTGGAGGAGGAGGTCATGCAGTCGATAACTGTGATTGATGACGATGACGAGGAGAA
          AAAGGAAGTCGCTGAAGACGAAGAAGAGAGCAGCAATAATGCCAAACCCATTGACCTTCACCAGCCAATTGCTGATAATG
          AGCACGAGCTGGACATTGTGATAAACAATGTGGTCTGCTCGTTTAGCGTCGGCTGTCACCTGAAGCTGCGCGAAATTGCG
          CTGCAGGGATCAAATGTGGAGTACCGTCGCGAGAACGGAATGGTGACAATGAAGCTCCGCCATCCATACACCACTGCCTC
          GATTTGGTCGTCGGGGAGGATTACCTGCACTGGTGCCACTTCCGAGTCAATGGCCAAGGTCGCTGCACGCCGCTATGCCA
          GATGCCTTGGCAAGCTGGGATTTCCCACTCGTTTCCTCAACTTTCGCATTGTCAACGTACTGGGCACCTGCAGCATGCCG
          TGGGCCATCAAGATCGTCAACTTTTCGGAGCGCCATCGCGAGAACGCCAGCTACGAGCCCGAGCTGCATCCTGGAGTGAC
          TTACAAGATGCGCGATCCCGATCCAAAGGCCACCCTGAAGATCTTCTCCACCGGCAGCGTAACAGTCACCGCGGCTAGCG
          TAAACCACGTTGAATCGGCTATCCAGCACATATACCCGCTGGTCTTTGATTTCCGCAAGCAACGTTCGGCGGAGGAGCTG
          CAGCATCTGCGTCAAAAGCAGCGTCTGCAAGCCGGCGGTGATCCCCACGAACTGGAGAAAAATGTCTTGGCCGATAACAA
          GACTGCTTCCCTTGATAATATCTTTGTTAATACAACAGCGGCGCACTCTAAATCATCGTCGAATGACCAAACATCAGCAC
          CCGCGACCATCTTGTCCAGCACAGTTGATAGTATGCCTCGTCTGAAACAGATGGTCAACTATCACCAGATGATGAAGCAA
          ACCCAGGAAGAGCGCCGCCATATAATGTTTAATGGGGAGAAGGCCAATCCGGCCTCCACCTCATCGGCGGCAGCAGCTCC
          CTCCACCTCCTCCTCATCGTCCTCATCCGGGGATAATATCTGTGCCAATGCCCGTCGCCGGGCCACCGAATGCTGGGCAA
          CCAAGCTGCAGAATAAGCGTCCACGTTACAATGATCCCGGTACCACGGGCACAATTAACGCCGCATCGTCCACAGCATCA
          GCCGCCACATCTTCGTTAGCCTCCCAGGCGACACATCTGCGTAATCCTCTCAAGACGGCCGCGTTGGCCAATGCACGTAT
          GTTAGGCGCCAAGGTGACAACATGCACACGCAACAGCATAATCGTGCAGCAGCCGCAACGTATCCAAATGCAGCAGCAGC
          AGCAACAGCTGCAACCGCAGCAGCAACAGACCAGCTTCTCGCCCAGCGAATTCGATGTTGATGACTTGATCGAGGAGGAG
          GAGAACAACGAATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAAATTTCAACTAAAATGGTTCAAATC
          GATGATGAAACACTACAACACTAAACACGCCACACTCACAAATAGCCACGAGCTTCTTTTCGAATTTGTTGGTTATTCGT
          TCAAGTCATTTTTCATCACATTTATTTTCGTGTGCTTGCCGCATTTAAACTAAACTCGAGAAAGCCTGGACACCGAAGCG
          AAAAGCACCCACAGCGAAGCAACAACAACAAACAACAAACAAAACACCGCAGCAACAACAAAATCAAGAGCCAAATATTT
          AAAATATAAGATTTACGTTTAAACTACTTTGTAAGTTAAGCGAGCACACCAGAAACAAACAAGCAGAGATAGCGAATAGA
          TGATTTCGATCCCGAAGTATCCCAGAAACCTCAATAACATCTAGATGGTAAGCAAGGGAGCTTACCACACGGTAAACATA
          AGTTTAGACTTAAAGAAAATACGTATGCGACAGCGTTTTACGTATATAACCGAAATCTGTGGATAGCCTGGATGAGTCAC
          CATCAATCATCGCAATTGCAATCAATTGTGGTGAAAGTAAGAGAACACACATGTAGAACTAATCACCAGGACAGGAAGAG
          GACGATACGAGCAAGGTGCCCAGGCGGATCGGATCTCGCAGCTTCCTATCTTATTTTAAATTTTTTTTTGAAGCTGAACT
          CCAATTCAGTTCTGGCCAAGCAAACTACAATTCTCAAGTAAAAATCCGTGGAGAGGAGGTGGGGCCAGAGAAAAGCCCAC
          TAGGATAGTTATCAATTATCTGAAGAACAACTGATTAATTTCTTGTATATTCATAGGAAATTTTTTTTGTTTTCGCTATA
          AGTCCTACATAATAAATGCTATACATAAGTGCTGCGTGTGGGCGCATAACAAACGAAACGAAATGCGTTTGAATGCGATT
          ATAATATTAATATTATTATGCATATATACAACACACACAAATACCTATATCTGGTCACTTCTAACCAATTATAAACAAAA
          CTGGAAAAGCAGAAAGTAATTATGTATGTTTTAATTTGTGCTGGCAGTTTTTGTGTTGCGCAGAAACTCGAATCGAATTA
          AGAATGAACTCCTGTAAGATGATGACAAAAATAAAAAAAACATTGTAATAGGATAGAGGGAAGAGGAGTCGATTAATGCG
          CGACTTATTAACAATAAGCTGAAACACATATATATATATATATATATTGTAATGTTTTTTTTTTTTGTATTTCGCTTAAG
          TGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATCAGAAAGTAAATATTTTAGTTAACTTAACGAAGCATACGCATAC
          ACAAACACACTCACACACACACACACACATACGTATACATATACATAATATTAAGGCATCCAAACAAACAACCAAACAAA
          CAAACAAACAAACGAACGAACGAATCATAAGCAATAATAGAATGTTTTCGTTGTAAAAGAGGTAAAAATAAAAACAAAAA
          CTAATGAAAGAAATACTCACGTTAAACATAAAATAACAAACTCTAGATGTTTTGGCGTGCCTTCACCCATAAATAGGAAA
          ACGAAATGAGATACGATAGCCAATTGTACAATCATTGAAGAAATAGTACTTCCAGACCACAACAGAACCCAAAATCATTG
          TACATACGCAAACAAAATTGATGTTTTCCAATTAAACGTGAATTGCCTCATTCGTACATCAAGTTCAATTTTCATTTGTG
          CTTAAAAACATGAAACCAACTTTCATATCGTTCAACTTGTGCATAATCAAAATAGCTAAAACGAAAGTAAAAGGGAAATT
          ACATATAATTAGTGAGAAATATCAAACTTTTCTTTCCCTCGATTATTTATACACATTTTTGGTATACAATTTTTTTTTTG
          TTTATTTTTTTTTTTTTAATGTTTTAATTTGCATAAACAAAATCGAGAAATGAAAATGCCTTTAGGGAACAAATAACTAG
          CGCGGAAAGGAAAGAGATAGGTTTAGGTATAAAAAAAAAAAAAATGAAAGATATTGAACAGATCGGAGCCGAAATGTATT
          TTTTGTGTATGCGAATATGTGAATAGGTCGACGATGGCCGAAGAACGTGTTACAATTGCAAAATTAACTTAGCCACTAAG
          CATTAGTCTTAAGTTAGCTGACAAACTGAATACTAAATTGTAAGCCACAATGCATATAGCAATGTAAAAAAGAAAATGAA
          ACAAAAAAAAAACAAACAACAAATCAAATCTAATGGAACCTAACGAGAACATTTAAGTGTAATTTAAGTGTAAATAAAAT
          AGTTGTTAACAAATCACAAAACAAACGAAAGCAAGAAACCAACAATAGTGTAATGTCTTCACGTCTAACTGCCTTCGAAA
          GATTCAAGAATTATTGAAATTTAAGCAAGCCCACATTTTGAATGCGAAGTTAGTATTCTCTTAAAACACGACTGCAAATT
          GCTTCACTTCAACCTTGTACTTTCAACACATTTTTTTTTTTTTGTTAGAGCAACAACAACAACAGCAACCAACAATTAAC
          AATTAACAATTAACAGACGGACGGAGAACTGGACAAACGGACAAGCCGACAAACGGACAGACACAACGGACAAATAGATC
          GAAAAGCCTAAATAAGTGTATTTGGTTTCAAGAACTTTGAAAAAGCAAAACTTAATATTAATATAGTATACAGATATATT
          TTTGATTATTATGTATTTAATGAGAAACAATGAAACGATTAATGATAATGATGCAAGTATCGATGATAACTAAGTGAAAA
          CAAATTGAGAAATCAAATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATTAATTATATACA
          AACATAATAAATAATTAACTGATAAATGGGGCGAGTAAGCTTTGCAACTAAGCTGAGAACAAAACGGATGGATAAACATT
          TAAAGCAAGCATACAAAAAAAGAAAAACAAACAAAAAAAAAAAGAAGAAGCAAACCATGGAAAATAAAACCAAGAAACAT
          TTATTTATTAGATCCTAAGTGAAGACTACGATTTGCTAGCGGAGATCAAGTCAGGCCAGAGCGGACCTTCAAGGTACCGC
          ATCCAAGTACGAAAAGCAAGATGAAATTACCTTACCAAAATGTGCTAGCCCTCGAAAATCCACCATTATCTCCATGGTGG
          TAATCAAATGATTATTCGCGAGGGCGAGTCTACAAGAAAAAAGTCCATAATAGGGCGAGTAATCGGAGTAATTAGTAACA
          CTATCTATCGTATGATAAATCAATTACCAACTAAACTGGGCTAACAAAACACGTATATCCACTAAGATTTATAGTTTTCC
          CCTAATCCCCTGAAACTAATTCTAAGTACATAAGTTGCAAGCAAAACGCTAAGAAAAAAAAAAAAAGAACCTAAAAGTTA
          GTTATATACACACAAAAGAGGATATATGAATGAGTGAATGGCGGTAAGAAGGAAGGATGTGCGTTTACTTTGGTTTTGAG
          ATTGTTTGCCGCAGCTTCACATCTCGAGCGAAACTGTGCGGTTTTTTTGAAAACGTCAGTTTTGAAAAAAAAAAACCAGA
          ACTGGCGATTTCAAGCACCGAGCGTCGTTTGTCTTTCAATATTTATCAAAAAAAAAACACACACACACACAAATACACAC
          AGAAAGAACTCATTTGATGTATTTAGTTTAACGTTTAGCCACTAGTTTCGAGGAACGTTAAAAAATGCCTTTCCTGAACT
          GCAGTCAACACTCAAATAAGCGACAAACAAACAAAATGAGAAAAGAAAAAAAGGAAACCAACCAACCAAATGAAAGCAAA
          TTGTTTGAATAAAAATCAAATTACAT
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0112927
          7131
          FBtr0330105
          6840
          FBtr0330106
          10041
          FBtr0333750
          7034
          FBtr0333811
          6934
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0289804
          1715
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0111840
          1715
          FBpp0303138
          1715
          FBpp0303139
          632
          FBpp0305892
          1714
          FBpp0305945
          632
          Comments

          Extended 3' UTR based on RNA-Seq and/or EST data.

          Long protein isoform supported (Western blot, FBrf0190342, FBrf0204155).

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          Trf2-RF
          Secondary FlyBase IDs
            References (0)