FB2025_01 , released February 20, 2025
Transcript: Dmel\Trf2-RJ
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General Information
Symbol
Dmel\Trf2-RJ
Species
D. melanogaster
Annotation Symbol
CG18009-RJ
FlyBase ID
FBtr0333811
Feature type
Associated gene
Evidence Rank
Length (nt)
6934
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 35 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        GTGAGTGCGCACACACACGCACGCACGCGCGCACGCAGCAATTGTGTTGGTGCAAGTGACGTTTCCCATTTCTTTTTGTT
        TTGCTTCGTTTCGTTTGCTGATTACTATTTACAGAAAATAACGGCAAGTTGCGACGCGAATTAACTGTGATCCTTTACTA
        AAAGATGCAGATTCTTTGAAAATTCGTGAATAAAAACCAAGCGATCGAATTCAAAGATTCATCCGCATAAGTTGGTAGTA
        AATAGCGGTGATCCTTCTCAAATGCAACGAGAAATTGTAACTGTTAAACAGACTGCTAAACGGAACAACTAAAAACTACA
        AGCAAATTTAACCAGGAGAAAAGAACGGAAGACTAGACATAATCATAAACATAGTAGATAGAATTAGAGAACCAGCAAAC
        CCAACAACTAGAACACTAAGAAAACATTAATTCTAATACAAAATCACACATAAAAAAGTATTTTTTGGCCTTAAGTGCAA
        ACATACTCACATACAAACACATACATACACATCCACATGAACGAAACAATGGAAAGAATGTAATACAACACCAAGGAAGA
        ATCACCTTTAGCCTTATATACAATTAAATATAATTAAGAAGCTAGCAAGAAAACGCAGAGCAAGAGTCCTATCAAGAAAC
        CCAAAAAGATAACAAGAAATATTTTTTTAACGATGGGCAGTGCGTAAGTAGGCATACAGAGAAAAAAAAAGAACTATTAC
        ACGATATACAGTAGATATAAAGAGCCGCATATCCACACCGCCACAGTCACACAAACACGTCAAAAAGGGGGATGGTTCCC
        CGACTCGAATACTTGAAGAATACCAAGTAGCTAGAGACTTAAGGAACGAGGATTTGTTTCCGGAACATCCGGTTGAACAT
        CCGGACGAAGATTCGGATAAGGAGAACCAATCGCCGAATCAATCCCCCAATCCAAGAGCCATCGGTGATTGTGAGCAAGG
        ACCTGACATTGGTAAAGATACTCTAAATCCCAACGAAGCTGACCAGTTTTCGAGCGAAGAAGTTGAGAAGAACGAAGCCA
        ACAGCAGCTGTAACGAGTCGGGCGGGGATGCTCGCAATTCTAGAGATCGTTTAAGTTCCTCTCATAGCGAGGACGAACAG
        CTTAACCAAGAATATTCAACTTCATCAAGCGGAAGCACCATCGGAAATCGTGAGCAAGGCTCTGACGTTGGTAAAGATAC
        TTCAAGTCGCAACGAAGCTGACCAGTTTTCGAACGAAGAAGTTGAGAAGAACGAAGCCAACAGCAGCGGTAACGAGTCGT
        ACGGGGATGCCTGCAATTCTAGTGATCGCTTAAGTTCTTCTAATAGCGAGGACGAACAGCTGCACCAAGAATATTCAACT
        TCATCAAGAGGAAGAACAAGGGAATATGCACAATCTGACTTGAATCCCGGGTACCAGGACTTGAATATCGGTAACCAGGA
        CTTGAATCAAGTTAATCGCGAGTACCAGGAGTCTAATAACGAGTACCAGGTTTCAAACCAAGAGTACCAGCACTTGAATA
        CCGAGTACCAGGAGTTGAATCACGGCGATCAGGACTCAAATGACGAGTACCAGGAGTTGAATCACGGCAACCAGGACTCA
        AATGACGAGTACCAGGAATCAAATCACGGCAACCAGGACTCAAATGACGAGTACCAGGAGTTGAATCACAGCAACCAGGA
        CTCAAATGACGAGTACCAGGAGTTGAATCACGGCGATCAGGACTCAAGTGACGAGTACCAGGATTTGAATCACGTCAACC
        AAGACTCAAATCACGAGTACCAGGCTTGGAATCACGAATACCAGGACTCAAATCACGAGTATCAGGCCTTGAATCGAGAG
        TACCAATATCCTGAATCTGATGAGGAAGAGGCCGCTAGAAAAAGAAACATATATACCCGTTTACGATCCTACGCTTGTCA
        GGTACATCTCCCTCGTTTAGGAGAATCAGAAGTTGATAGCGACGATCGTCGCCATAACCCAATCAATCAGCCATTCAATC
        AGCCAATCAATAGGCCAAATCAAAAATCGGATTCATCTTTAGAGTCATCTTCGCCGGAGAGACAAGACTCTGAAAGCGAG
        TCGCGACAAGCTTCAGATGAGGAATCGTCTTCTGGGGACTCGGACTACTTAATCGATCCAGTTACTGGGTGGCTATCGCG
        CCGGCGAGAAACTTCTACCGAACGCGAGGAAAAAAGCGACCAAAGCCAACAGGAGTCGTCAGAGGAAATTACAGACGAAC
        AGAAGGAAGAAAGCGACGACGTCGAACAACAGTCGCCGGCTGAACATACTTCTTCTGATAGACGCGATCATTCGCCAGAC
        AAGCAACAGAATAAGCGAAAATCGTTAGGCACTGGGAATTCTTCGTATTCGAAGAAACCATTATTGGACGGTGACAAAGG
        AGACCCACGTTCACATTTATCGTCTCTGGGAAGTCGCAGATCCTTAAAGCGTAAATGGCCTTTTGATTGTACAGACTCTA
        AGAAATTTAAACCAAACTTGCAGAGTGAGGAAGACAAATCTGAGGAGGAAAAACGTGAAGATACGGAAAGCGAATGCTCT
        GACGAAGAAGACTCAGATAGTTCAAGTTTCGATACAGATTCAAATTCAGATTCAGATTCAAATTTAGATTTAGATTCCGA
        TTCCGATTCCCATTCCGATTTCGAATCATCTTCAAGTTCTGAGGAATCTGCCCAGGATCCAGCTCCTGAAGGCGAAACCG
        ATCAAGATCCAGCTCCTGAAGGCGAAGCCGATCAAGATCCAGCTCCTGAAGGCGGAGTCGATCAAGATCCAGCTCCTGAA
        GGCGGAGTCGATCAAGATCCAGCTCCTGAAGGCGAAGTCGATCAAGATCCAGCTCCTGAAGGCGAATCCGATCAAGATCT
        AGCTCCTGAAGGCGGAGTCGATCAAGATCCAGCTCCTGAATTCGGAACCGATCAAGATCCACATCCTTATTACAACGATC
        AGGATCCAGCTCCTTATTACGACGATCAGGATCCAGCTTCTTATTACGACGATCACATTTGTGATTCTGAGGAGGATTAT
        AAACCATTTATCTTCTCAAAGGAAAGGAAGTTCTTGAAATTCGTAACAAATCCTTTAGGGGATGATAAATCTAGTTTGGA
        CCTTAGCATACAGCTCTATAAGGTATTTGGAGCTTACAAACTGGAAGACGTATACAGCAGTATTGATGAGGAAGGCCAAC
        CAGAACAGGACCTGCAACTGAAGCAGCAACAGAAACATTTAAAAAAATATCAAAAGTTGCAACTGGTGGTATTCTGGCAC
        CAGGAGAAATTCTTTTCAAAGGAGCAACTGTTGCTATATGAGTATCTGAAACTACTTTTGCAGAAATTCTTTCCACAAGA
        GCAACAGGAGAAACGGTTGCAACAGGAGAAACTTTTGCAACAGGAGAAACTCTTGCAACAGGAGAAACGGTTGCAACAGG
        AGAAACGGTTGCAACAGGAGAAACGGTTGCAACAGGAGAAACGGTTGCAACAGGAGAAACGGTTGCAACAGCAGAAACTC
        TTGCAACAGCAGAAACTCTTGCAACAGGAGAAACTCTTGCAACAGCAGAAACTCTTGCAACAGGAGAAACTCTTGCAACA
        GGAGAAACTCTTGCAACAGGAGAAACAATTGCAACAGGAGAAACACTTGCCACAGGAGCGACAGTTGCAACAGGATAAAG
        TCTTCCTACAGCTACGACAGTTGCAACAGAAGAAAGAACTGGAGGAGCAGCGAGAGCGAAAGCGCCACCTCTTTGAGCAA
        CAGAAACAGTTTGTCCTAGAAAAATTGCGCCAACAGAAGGAGCAGCATCGTCGTCAGCAAAATCGCGTAAAACGCGAACG
        TAAATTGCGCCAGAAAAAGGAGAAACAGCGCTTGGAATACGAACGATTCTTGAAGGAATATAGGGAGGACTGTAAACGTC
        AGTTGCGTTTGCAGCGCGAGCATTATCTGATCAAGATTAAGCAGCTGGAGAAGGCCAGTCAGCGCTCGTTGAAGGGGAAT
        CGAAAGCACAAGCTGATGCAAAACGATATGGTCAGCATACCGGTGGCCAATTTGAACGGCGGCCTTAAAGCGGCCAGCAG
        CGGTTCCGGAGTTGGTGTAGTGACCTCCGGCGGCGTCGTATCCTCGGCGGTGCTGGCCAATGCCCCACGTGTATACCTAA
        CGCCCTCCTCCACATTCATGACCAATCGCCAAATGGCGGGAGTGGCGTCCACCGGAAGAATGAGCGGACAAGTCGTCGGT
        GGTTCATCTGGCACAGCCTCAACAGCCGGTACCGTTCGCTATTTTTCGCAATTCAGCAAAATGCAAACGGCCGGCGGACC
        CAGTTTGCAAAGGAAACTTGCCAACGGGGATACCATTGTTCTGGCAACCGGCAGTAAAAATATGTTCCTTACTAGCAGCG
        AAAATAAGGCTAATCTGCCGACCGTCGCCAGCAATGGCAATGGTCTGATCACAGCCAAAATGGATCTATTGGAGGAGGAG
        GTCATGCAGTCGATAACTGTGATTGATGACGATGACGAGGAGAAAAAGGAAGTCGCTGAAGACGAAGAAGAGAGCAGCAA
        TAATGCCAAACCCATTGACCTTCACCAGCCAATTGCTGATAATGAGCACGAGCTGGACATTGTGATAAACAATGTGGTCT
        GCTCGTTTAGCGTCGGCTGTCACCTGAAGCTGCGCGAAATTGCGCTGCAGGGATCAAATGTGGAGTACCGTCGCGAGAAC
        GGAATGGTGACAATGAAGCTCCGCCATCCATACACCACTGCCTCGATTTGGTCGTCGGGGAGGATTACCTGCACTGGTGC
        CACTTCCGAGTCAATGGCCAAGGTCGCTGCACGCCGCTATGCCAGATGCCTTGGCAAGCTGGGATTTCCCACTCGTTTCC
        TCAACTTTCGCATTGTCAACGTACTGGGCACCTGCAGCATGCCGTGGGCCATCAAGATCGTCAACTTTTCGGAGCGCCAT
        CGCGAGAACGCCAGCTACGAGCCCGAGCTGCATCCTGGAGTGACTTACAAGATGCGCGATCCCGATCCAAAGGCCACCCT
        GAAGATCTTCTCCACCGGCAGCGTAACAGTCACCGCGGCTAGCGTAAACCACGTTGAATCGGCTATCCAGCACATATACC
        CGCTGGTCTTTGATTTCCGCAAGCAACGTTCGGCGGAGGAGCTGCAGCATCTGCGTCAAAAGCAGCGTCTGCAAGCCGGC
        GGTGATCCCCACGAACTGGAGAAAAATGTCTTGGCCGATAACAAGACTGCTTCCCTTGATAATATCTTTGTTAATACAAC
        AGCGGCGCACTCTAAATCATCGTCGAATGACCAAACATCAGCACCCGCGACCATCTTGTCCAGCACAGTTGATAGTATGC
        CTCGTCTGAAACAGATGGTCAACTATCACCAGATGATGAAGCAAACCCAGGAAGAGCGCCGCCATATAATGTTTAATGGG
        GAGAAGGCCAATCCGGCCTCCACCTCATCGGCGGCAGCAGCTCCCTCCACCTCCTCCTCATCGTCCTCATCCGGGGATAA
        TATCTGTGCCAATGCCCGTCGCCGGGCCACCGAATGCTGGGCAACCAAGCTGCAGAATAAGCGTCCACGTTACAATGATC
        CCGGTACCACGGGCACAATTAACGCCGCATCGTCCACAGCATCAGCCGCCACATCTTCGTTAGCCTCCCAGGCGACACAT
        CTGCGTAATCCTCTCAAGACGGCCGCGTTGGCCAATGCACGTATGTTAGGCGCCAAGGTGACAACATGCACACGCAACAG
        CATAATCGTGCAGCAGCCGCAACGTATCCAAATGCAGCAGCAGCAGCAACAGCTGCAACCGCAGCAGCAACAGACCAGCT
        TCTCGCCCAGCGAATTCGATGTTGATGACTTGATCGAGGAGGAGGAGAACAACGAATTGGATATGCCCTTCTAAGCTAGC
        GCTGCCCGTGCCAAAAAAAAATTTCAACTAAAATGGTTCAAATCGATGATGAAACACTACAACACTAAACACGCCACACT
        CACAAATAGCCACGAGCTTCTTTTCGAATTTGTTGGTTATTCGTTCAAGTCATTTTTCATCACATTTATTTTCGTGTGCT
        TGCCGCATTTAAACTAAACTCGAGAAAGCCTGGACACCGAAGCGAAAAGCACCCACAGCGAAGCAACAACAACAAACAAC
        AAACAAAACACCGCAGCAACAACAAAATCAAGAGCCAAATATTTAAAATATAAGATTTACGTTTAAACTACTTTGTAAGT
        TAAGCGAGCACACCAGAAACAAACAAGCAGAGATAGCGAATAGATGATTTCGATCCCGAAGTATCCCAGAAACCTCAATA
        ACATCTAGATGGTAAGCAAGGGAGCTTACCACACGGTAAACATAAGTTTAGACTTAAAGAAAATACGTATGCGACAGCGT
        TTTACGTATATAACCGAAATCTGTGGATAGCCTGGATGAGTCACCATCAATCATCGCAATTGCAATCAATTGTGGTGAAA
        GTAAGAGAACACACATGTAGAACTAATCACCAGGACAGGAAGAGGACGATACGAGCAAGGTGCCCAGGCGGATCGGATCT
        CGCAGCTTCCTATCTTATTTTAAATTTTTTTTTGAAGCTGAACTCCAATTCAGTTCTGGCCAAGCAAACTACAATTCTCA
        AGTAAAAATCCGTGGAGAGGAGGTGGGGCCAGAGAAAAGCCCACTAGGATAGTTATCAATTATCTGAAGAACAACTGATT
        AATTTCTTGTATATTCATAGGAAATTTTTTTTGTTTTCGCTATAAGTCCTACATAATAAATGCTATACATAAGTGCTGCG
        TGTGGGCGCATAACAAACGAAACGAAATGCGTTTGAATGCGATTATAATATTAATATTATTATGCATATATACAACACAC
        ACAAATACCTATATCTGGTCACTTCTAACCAATTATAAACAAAACTGGAAAAGC
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0112927
        7131
        FBtr0300577
        9866
        FBtr0330105
        6840
        FBtr0330106
        10041
        FBtr0333750
        7034
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0305945
        632
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0111840
        1715
        FBpp0289804
        1715
        FBpp0303138
        1715
        FBpp0303139
        632
        FBpp0305892
        1714
        Comments

        Translation initiation at the downstream translation start site to produce a 75 kDa isoform is postulated to be mediated by an IRES (internal ribosome entry site, FBrf0192356).

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Trf2-RJ
        Secondary FlyBase IDs
          References (0)