FB2025_01 , released February 20, 2025
Transcript: Dmel\Trf2-RH
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General Information
Symbol
Dmel\Trf2-RH
Species
D. melanogaster
Annotation Symbol
CG18009-RH
FlyBase ID
FBtr0330106
Feature type
Associated gene
Evidence Rank
Length (nt)
10041
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 42 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          GCTCAAAGTGAAACGGCCAAACGAAGAAGACGTATCGTGTGTGCTCAGACTTGTGCTCTCAAAATTTTTGGTCAACTACA
          TTATTCAGCTCTGTTTAGAGTTTTAACTAAAAAAGATCACAAGCCAAAAAAAAAAAAAACAAAGAGAAACCTAAAGAAAT
          ATCAACCAAAAGTGTGCAAAATCCAAAAGATTCTACAATCCGAATCGAAAACAAAAACATAAGAACCACAAAAGCAGCAG
          CAGAAAGAGACACAGAGAGCAGCGAAAACTTAACTGCGAATTCAGCGGCTGAAGCAAAGCAGCGGAGCCCAAGTGCAAGC
          GAGACGGCAGCAGAGCTCCGCTGCAAGGCAACGGGATAGAAAGAGAGATAAATAGAGAGACAGCGCAGCAGCGATATAGA
          GTGAGAGCAGGCGGGAGAGCGAGTAGCGGCAGCGACAGCAACACAGCCACAAAAGAGATCGTGAGAGGGAGGGAGAGCTA
          GACGACGACCTACTACACAAAAAAAGGCTCTGTGGTCGCGATTACCAGCGTCTACGACAAGCTAGAAAACAAAAAAAAGA
          AAAAATCATTCAAATAATTAAGACTGCTAAACGGAACAACTAAAAACTACAAGCAAATTTAACCAGGAGAAAAGAACGGA
          AGACTAGACATAATCATAAACATAGTAGATAGAATTAGAGAACCAGCAAACCCAACAACTAGAACACTAAGAAAACATTA
          ATTCTAATACAAAATCACACATAAAAAAGTATTTTTTGGCCTTAAGTGCAAACATACTCACATACAAACACATACATACA
          CATCCACATGAACGAAACAATGGAAAGAATGTAATACAACACCAAGGAAGAATCACCTTTAGCCTTATATACAATTAAAT
          ATAATTAAGAAGCTAGCAAGAAAACGCAGAGCAAGAGTCCTATCAAGAAACCCAAAAAGATAACAAGAAATATTTTTTTA
          ACGATGGGCAGTGCGTAAGTAGGCATACAGAGAAAAAAAAAGAACTATTACACGATATACAGTAGATATAAAGAGCCGCA
          TATCCACACCGCCACAGTCACACAAACACGTCAAAAAGGGGGATGGTTCCCCGACTCGAATACTTGAAGAATACCAAGTA
          GCTAGAGACTTAAGGAACGAGGATTTGTTTCCGGAACATCCGGTTGAACATCCGGACGAAGATTCGGATAAGGAGAACCA
          ATCGCCGAATCAATCCCCCAATCCAAGAGCCATCGGTGATTGTGAGCAAGGACCTGACATTGGTAAAGATACTCTAAATC
          CCAACGAAGCTGACCAGTTTTCGAGCGAAGAAGTTGAGAAGAACGAAGCCAACAGCAGCTGTAACGAGTCGGGCGGGGAT
          GCTCGCAATTCTAGAGATCGTTTAAGTTCCTCTCATAGCGAGGACGAACAGCTTAACCAAGAATATTCAACTTCATCAAG
          CGGAAGCACCATCGGAAATCGTGAGCAAGGCTCTGACGTTGGTAAAGATACTTCAAGTCGCAACGAAGCTGACCAGTTTT
          CGAACGAAGAAGTTGAGAAGAACGAAGCCAACAGCAGCGGTAACGAGTCGTACGGGGATGCCTGCAATTCTAGTGATCGC
          TTAAGTTCTTCTAATAGCGAGGACGAACAGCTGCACCAAGAATATTCAACTTCATCAAGAGGAAGAACAAGGGAATATGC
          ACAATCTGACTTGAATCCCGGGTACCAGGACTTGAATATCGGTAACCAGGACTTGAATCAAGTTAATCGCGAGTACCAGG
          AGTCTAATAACGAGTACCAGGTTTCAAACCAAGAGTACCAGCACTTGAATACCGAGTACCAGGAGTTGAATCACGGCGAT
          CAGGACTCAAATGACGAGTACCAGGAGTTGAATCACGGCAACCAGGACTCAAATGACGAGTACCAGGAATCAAATCACGG
          CAACCAGGACTCAAATGACGAGTACCAGGAGTTGAATCACAGCAACCAGGACTCAAATGACGAGTACCAGGAGTTGAATC
          ACGGCGATCAGGACTCAAGTGACGAGTACCAGGATTTGAATCACGTCAACCAAGACTCAAATCACGAGTACCAGGCTTGG
          AATCACGAATACCAGGACTCAAATCACGAGTATCAGGCCTTGAATCGAGAGTACCAATATCCTGAATCTGATGAGGAAGA
          GGCCGCTAGAAAAAGAAACATATATACCCGTTTACGATCCTACGCTTGTCAGGTACATCTCCCTCGTTTAGGAGAATCAG
          AAGTTGATAGCGACGATCGTCGCCATAACCCAATCAATCAGCCATTCAATCAGCCAATCAATAGGCCAAATCAAAAATCG
          GATTCATCTTTAGAGTCATCTTCGCCGGAGAGACAAGACTCTGAAAGCGAGTCGCGACAAGCTTCAGATGAGGAATCGTC
          TTCTGGGGACTCGGACTACTTAATCGATCCAGTTACTGGGTGGCTATCGCGCCGGCGAGAAACTTCTACCGAACGCGAGG
          AAAAAAGCGACCAAAGCCAACAGGAGTCGTCAGAGGAAATTACAGACGAACAGAAGGAAGAAAGCGACGACGTCGAACAA
          CAGTCGCCGGCTGAACATACTTCTTCTGATAGACGCGATCATTCGCCAGACAAGCAACAGAATAAGCGAAAATCGTTAGG
          CACTGGGAATTCTTCGTATTCGAAGAAACCATTATTGGACGGTGACAAAGGAGACCCACGTTCACATTTATCGTCTCTGG
          GAAGTCGCAGATCCTTAAAGCGTAAATGGCCTTTTGATTGTACAGACTCTAAGAAATTTAAACCAAACTTGCAGAGTGAG
          GAAGACAAATCTGAGGAGGAAAAACGTGAAGATACGGAAAGCGAATGCTCTGACGAAGAAGACTCAGATAGTTCAAGTTT
          CGATACAGATTCAAATTCAGATTCAGATTCAAATTTAGATTTAGATTCCGATTCCGATTCCCATTCCGATTTCGAATCAT
          CTTCAAGTTCTGAGGAATCTGCCCAGGATCCAGCTCCTGAAGGCGAAACCGATCAAGATCCAGCTCCTGAAGGCGAAGCC
          GATCAAGATCCAGCTCCTGAAGGCGGAGTCGATCAAGATCCAGCTCCTGAAGGCGGAGTCGATCAAGATCCAGCTCCTGA
          AGGCGAAGTCGATCAAGATCCAGCTCCTGAAGGCGAATCCGATCAAGATCTAGCTCCTGAAGGCGGAGTCGATCAAGATC
          CAGCTCCTGAATTCGGAACCGATCAAGATCCACATCCTTATTACAACGATCAGGATCCAGCTCCTTATTACGACGATCAG
          GATCCAGCTTCTTATTACGACGATCACATTTGTGATTCTGAGGAGGATTATAAACCATTTATCTTCTCAAAGGAAAGGAA
          GTTCTTGAAATTCGTAACAAATCCTTTAGGGGATGATAAATCTAGTTTGGACCTTAGCATACAGCTCTATAAGGTATTTG
          GAGCTTACAAACTGGAAGACGTATACAGCAGTATTGATGAGGAAGGCCAACCAGAACAGGACCTGCAACTGAAGCAGCAA
          CAGAAACATTTAAAAAAATATCAAAAGTTGCAACTGGTGGTATTCTGGCACCAGGAGAAATTCTTTTCAAAGGAGCAACT
          GTTGCTATATGAGTATCTGAAACTACTTTTGCAGAAATTCTTTCCACAAGAGCAACAGGAGAAACGGTTGCAACAGGAGA
          AACTTTTGCAACAGGAGAAACTCTTGCAACAGGAGAAACGGTTGCAACAGGAGAAACGGTTGCAACAGGAGAAACGGTTG
          CAACAGGAGAAACGGTTGCAACAGGAGAAACGGTTGCAACAGCAGAAACTCTTGCAACAGCAGAAACTCTTGCAACAGGA
          GAAACTCTTGCAACAGCAGAAACTCTTGCAACAGGAGAAACTCTTGCAACAGGAGAAACTCTTGCAACAGGAGAAACAAT
          TGCAACAGGAGAAACACTTGCCACAGGAGCGACAGTTGCAACAGGATAAAGTCTTCCTACAGCTACGACAGTTGCAACAG
          AAGAAAGAACTGGAGGAGCAGCGAGAGCGAAAGCGCCACCTCTTTGAGCAACAGAAACAGTTTGTCCTAGAAAAATTGCG
          CCAACAGAAGGAGCAGCATCGTCGTCAGCAAAATCGCGTAAAACGCGAACGTAAATTGCGCCAGAAAAAGGAGAAACAGC
          GCTTGGAATACGAACGATTCTTGAAGGAATATAGGGAGGACTGTAAACGTCAGTTGCGTTTGCAGCGCGAGCATTATCTG
          ATCAAGATTAAGCAGCTGGAGAAGGCCAGTCAGCGCTCGTTGAAGGGGAATCGAAAGCACAAGCTGATGCAAAACGATAT
          GGTCAGCATACCGGTGGCCAATTTGAACGGCGGCCTTAAAGCGGCCAGCAGCGGTTCCGGAGTTGGTGTAGTGACCTCCG
          GCGGCGTCGTATCCTCGGCGGTGCTGGCCAATGCCCCACGTGTATACCTAACGCCCTCCTCCACATTCATGACCAATCGC
          CAAATGGCGGGAGTGGCGTCCACCGGAAGAATGAGCGGACAAGTCGTCGGTGGTTCATCTGGCACAGCCTCAACAGCCGG
          TACCGTTCGCTATTTTTCGCAATTCAGCAAAATGCAAACGGCCGGCGGACCCAGTTTGCAAAGGAAACTTGCCAACGGGG
          ATACCATTGTTCTGGCAACCGGCAGTAAAAATATGTTCCTTACTAGCAGCGAAAATAAGGCTAATCTGCCGACCGTCGCC
          AGCAATGGCAATGGTCTGATCACAGCCAAAATGGATCTATTGGAGGAGGAGGTCATGCAGTCGATAACTGTGATTGATGA
          CGATGACGAGGAGAAAAAGGAAGTCGCTGAAGACGAAGAAGAGAGCAGCAATAATGCCAAACCCATTGACCTTCACCAGC
          CAATTGCTGATAATGAGCACGAGCTGGACATTGTGATAAACAATGTGGTCTGCTCGTTTAGCGTCGGCTGTCACCTGAAG
          CTGCGCGAAATTGCGCTGCAGGGATCAAATGTGGAGTACCGTCGCGAGAACGGAATGGTGACAATGAAGCTCCGCCATCC
          ATACACCACTGCCTCGATTTGGTCGTCGGGGAGGATTACCTGCACTGGTGCCACTTCCGAGTCAATGGCCAAGGTCGCTG
          CACGCCGCTATGCCAGATGCCTTGGCAAGCTGGGATTTCCCACTCGTTTCCTCAACTTTCGCATTGTCAACGTACTGGGC
          ACCTGCAGCATGCCGTGGGCCATCAAGATCGTCAACTTTTCGGAGCGCCATCGCGAGAACGCCAGCTACGAGCCCGAGCT
          GCATCCTGGAGTGACTTACAAGATGCGCGATCCCGATCCAAAGGCCACCCTGAAGATCTTCTCCACCGGCAGCGTAACAG
          TCACCGCGGCTAGCGTAAACCACGTTGAATCGGCTATCCAGCACATATACCCGCTGGTCTTTGATTTCCGCAAGCAACGT
          TCGGCGGAGGAGCTGCAGCATCTGCGTCAAAAGCAGCGTCTGCAAGCCGGCGGTGATCCCCACGAACTGGAGAAAAATGT
          CTTGGCCGATAACAAGACTGCTTCCCTTGATAATATCTTTGTTAATACAACAGCGGCGCACTCTAAATCATCGTCGAATG
          ACCAAACATCAGCACCCGCGACCATCTTGTCCAGCACAGTTGATAGTATGCCTCGTCTGAAACAGATGGTCAACTATCAC
          CAGATGATGAAGCAAACCCAGGAAGAGCGCCGCCATATAATGTTTAATGGGGAGAAGGCCAATCCGGCCTCCACCTCATC
          GGCGGCAGCAGCTCCCTCCACCTCCTCCTCATCGTCCTCATCCGGGGATAATATCTGTGCCAATGCCCGTCGCCGGGCCA
          CCGAATGCTGGGCAACCAAGCTGCAGAATAAGCGTCCACGTTACAATGATCCCGGTACCACGGGCACAATTAACGCCGCA
          TCGTCCACAGCATCAGCCGCCACATCTTCGTTAGCCTCCCAGGCGACACATCTGCGTAATCCTCTCAAGACGGCCGCGTT
          GGCCAATGCACGTATGTTAGGCGCCAAGGTGACAACATGCACACGCAACAGCATAATCGTGCAGCAGCCGCAACGTATCC
          AAATGCAGCAGCAGCAGCAACAGCTGCAACCGCAGCAGCAACAGACCAGCTTCTCGCCCAGCGAATTCGATGTTGATGAC
          TTGATCGAGGAGGAGGAGAACAACGAATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAAATTTCAACT
          AAAATGGTTCAAATCGATGATGAAACACTACAACACTAAACACGCCACACTCACAAATAGCCACGAGCTTCTTTTCGAAT
          TTGTTGGTTATTCGTTCAAGTCATTTTTCATCACATTTATTTTCGTGTGCTTGCCGCATTTAAACTAAACTCGAGAAAGC
          CTGGACACCGAAGCGAAAAGCACCCACAGCGAAGCAACAACAACAAACAACAAACAAAACACCGCAGCAACAACAAAATC
          AAGAGCCAAATATTTAAAATATAAGATTTACGTTTAAACTACTTTGTAAGTTAAGCGAGCACACCAGAAACAAACAAGCA
          GAGATAGCGAATAGATGATTTCGATCCCGAAGTATCCCAGAAACCTCAATAACATCTAGATGGTAAGCAAGGGAGCTTAC
          CACACGGTAAACATAAGTTTAGACTTAAAGAAAATACGTATGCGACAGCGTTTTACGTATATAACCGAAATCTGTGGATA
          GCCTGGATGAGTCACCATCAATCATCGCAATTGCAATCAATTGTGGTGAAAGTAAGAGAACACACATGTAGAACTAATCA
          CCAGGACAGGAAGAGGACGATACGAGCAAGGTGCCCAGGCGGATCGGATCTCGCAGCTTCCTATCTTATTTTAAATTTTT
          TTTTGAAGCTGAACTCCAATTCAGTTCTGGCCAAGCAAACTACAATTCTCAAGTAAAAATCCGTGGAGAGGAGGTGGGGC
          CAGAGAAAAGCCCACTAGGATAGTTATCAATTATCTGAAGAACAACTGATTAATTTCTTGTATATTCATAGGAAATTTTT
          TTTGTTTTCGCTATAAGTCCTACATAATAAATGCTATACATAAGTGCTGCGTGTGGGCGCATAACAAACGAAACGAAATG
          CGTTTGAATGCGATTATAATATTAATATTATTATGCATATATACAACACACACAAATACCTATATCTGGTCACTTCTAAC
          CAATTATAAACAAAACTGGAAAAGCAGAAAGTAATTATGTATGTTTTAATTTGTGCTGGCAGTTTTTGTGTTGCGCAGAA
          ACTCGAATCGAATTAAGAATGAACTCCTGTAAGATGATGACAAAAATAAAAAAAACATTGTAATAGGATAGAGGGAAGAG
          GAGTCGATTAATGCGCGACTTATTAACAATAAGCTGAAACACATATATATATATATATATATTGTAATGTTTTTTTTTTT
          TGTATTTCGCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATCAGAAAGTAAATATTTTAGTTAACTTAAC
          GAAGCATACGCATACACAAACACACTCACACACACACACACACATACGTATACATATACATAATATTAAGGCATCCAAAC
          AAACAACCAAACAAACAAACAAACAAACGAACGAACGAATCATAAGCAATAATAGAATGTTTTCGTTGTAAAAGAGGTAA
          AAATAAAAACAAAAACTAATGAAAGAAATACTCACGTTAAACATAAAATAACAAACTCTAGATGTTTTGGCGTGCCTTCA
          CCCATAAATAGGAAAACGAAATGAGATACGATAGCCAATTGTACAATCATTGAAGAAATAGTACTTCCAGACCACAACAG
          AACCCAAAATCATTGTACATACGCAAACAAAATTGATGTTTTCCAATTAAACGTGAATTGCCTCATTCGTACATCAAGTT
          CAATTTTCATTTGTGCTTAAAAACATGAAACCAACTTTCATATCGTTCAACTTGTGCATAATCAAAATAGCTAAAACGAA
          AGTAAAAGGGAAATTACATATAATTAGTGAGAAATATCAAACTTTTCTTTCCCTCGATTATTTATACACATTTTTGGTAT
          ACAATTTTTTTTTTGTTTATTTTTTTTTTTTTAATGTTTTAATTTGCATAAACAAAATCGAGAAATGAAAATGCCTTTAG
          GGAACAAATAACTAGCGCGGAAAGGAAAGAGATAGGTTTAGGTATAAAAAAAAAAAAAATGAAAGATATTGAACAGATCG
          GAGCCGAAATGTATTTTTTGTGTATGCGAATATGTGAATAGGTCGACGATGGCCGAAGAACGTGTTACAATTGCAAAATT
          AACTTAGCCACTAAGCATTAGTCTTAAGTTAGCTGACAAACTGAATACTAAATTGTAAGCCACAATGCATATAGCAATGT
          AAAAAAGAAAATGAAACAAAAAAAAAACAAACAACAAATCAAATCTAATGGAACCTAACGAGAACATTTAAGTGTAATTT
          AAGTGTAAATAAAATAGTTGTTAACAAATCACAAAACAAACGAAAGCAAGAAACCAACAATAGTGTAATGTCTTCACGTC
          TAACTGCCTTCGAAAGATTCAAGAATTATTGAAATTTAAGCAAGCCCACATTTTGAATGCGAAGTTAGTATTCTCTTAAA
          ACACGACTGCAAATTGCTTCACTTCAACCTTGTACTTTCAACACATTTTTTTTTTTTTGTTAGAGCAACAACAACAACAG
          CAACCAACAATTAACAATTAACAATTAACAGACGGACGGAGAACTGGACAAACGGACAAGCCGACAAACGGACAGACACA
          ACGGACAAATAGATCGAAAAGCCTAAATAAGTGTATTTGGTTTCAAGAACTTTGAAAAAGCAAAACTTAATATTAATATA
          GTATACAGATATATTTTTGATTATTATGTATTTAATGAGAAACAATGAAACGATTAATGATAATGATGCAAGTATCGATG
          ATAACTAAGTGAAAACAAATTGAGAAATCAAATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAAC
          AATTAATTATATACAAACATAATAAATAATTAACTGATAAATGGGGCGAGTAAGCTTTGCAACTAAGCTGAGAACAAAAC
          GGATGGATAAACATTTAAAGCAAGCATACAAAAAAAGAAAAACAAACAAAAAAAAAAAGAAGAAGCAAACCATGGAAAAT
          AAAACCAAGAAACATTTATTTATTAGATCCTAAGTGAAGACTACGATTTGCTAGCGGAGATCAAGTCAGGCCAGAGCGGA
          CCTTCAAGGTACCGCATCCAAGTACGAAAAGCAAGATGAAATTACCTTACCAAAATGTGCTAGCCCTCGAAAATCCACCA
          TTATCTCCATGGTGGTAATCAAATGATTATTCGCGAGGGCGAGTCTACAAGAAAAAAGTCCATAATAGGGCGAGTAATCG
          GAGTAATTAGTAACACTATCTATCGTATGATAAATCAATTACCAACTAAACTGGGCTAACAAAACACGTATATCCACTAA
          GATTTATAGTTTTCCCCTAATCCCCTGAAACTAATTCTAAGTACATAAGTTGCAAGCAAAACGCTAAGAAAAAAAAAAAA
          AGAACCTAAAAGTTAGTTATATACACACAAAAGAGGATATATGAATGAGTGAATGGCGGTAAGAAGGAAGGATGTGCGTT
          TACTTTGGTTTTGAGATTGTTTGCCGCAGCTTCACATCTCGAGCGAAACTGTGCGGTTTTTTTGAAAACGTCAGTTTTGA
          AAAAAAAAAACCAGAACTGGCGATTTCAAGCACCGAGCGTCGTTTGTCTTTCAATATTTATCAAAAAAAAAACACACACA
          CACACAAATACACACAGAAAGAACTCATTTGATGTATTTAGTTTAACGTTTAGCCACTAGTTTCGAGGAACGTTAAAAAA
          TGCCTTTCCTGAACTGCAGTCAACACTCAAATAAGCGACAAACAAACAAAATGAGAAAAGAAAAAAAGGAAACCAACCAA
          CCAAATGAAAGCAAATTGTTTGAATAAAAATCAAATTACAT
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0112927
          7131
          FBtr0300577
          9866
          FBtr0330105
          6840
          FBtr0333750
          7034
          FBtr0333811
          6934
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0303139
          632
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0111840
          1715
          FBpp0289804
          1715
          FBpp0303138
          1715
          FBpp0305892
          1714
          FBpp0305945
          632
          Comments

          Short protein isoform supported (Western blot, FBrf0190342, FBrf0204155); alternative splice results in use of downstream translation start.

          Extended 3' UTR based on RNA-Seq and/or EST data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          Trf2-RH
          Secondary FlyBase IDs
            References (0)