FB2025_01 , released February 20, 2025
Transcript: Dmel\Mmp1-RE
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General Information
Symbol
Dmel\Mmp1-RE
Species
D. melanogaster
Annotation Symbol
CG4859-RE
FlyBase ID
FBtr0304005
Feature type
mRNA
Associated gene
Dmel\Mmp1
Evidence Rank
Length (nt)
3880
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 28 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          AGTTGAATTTTGCGCGCAGCCCAGGGCGGATGTGTTTAGCGGCGAGAAACCGAAAAAGTCACCACGATAGAATAAGAATC
GCAGTTGGAGTCTAGTGCTATATAAATAGTCGCGAAGAAAGTTATTCGAAAAGTGAATGAGTTCAGTTTTGGGTTTTGGT
TTTTTGGTTTTGAGTTTTGGTTTCTAACGCGGAAACGAGCGGGAAAATGGAAGTGCCAGCGAGCAATTAGTGCAGCCAGA
CATAAAGACACACTCACAGCTCGAAAATACAGCAAAACAAAAGGATTGCGACTGTGAATTATAAAGTATAAATTATAAGC
AACGACAACACATCCACAGCGGAATACGCAGCGACGACAGCGACAACAAACAAGAGAAAGAAATTGATATAAAGTTCAAA
GTGCCAGCGGCAAGTGGAACCACATGACAAATAGACGAGCCTCGGGAGCAACCCACTGCAAAACCACCAACAACTGCAAT
ATTAGCAACAACAGCAACAACAGCAACAAAATGACAAACTGCCAAAGTTCAGTGTTCATAGTCGTAGGCACCCTGTTTTC
CATCATGGCAGCGGCTCAATCGGCACCCGTTTCCACCACCACACAGGCAGAGATCTACCTGTCCCAGTTCGGCTATCTAC
CCGCCTCTGCCCGCAATCCCGCCAGCAGTGGGCTACACGACCAGCGGACCTGGGTGAGTGCCATCGAGGAGTTCCAAAGC
TTCGCGGGACTGAACATCACCGGCGAGCTGGATGCGGAGACAATGAAGCTGATGTCCCTGCCCCGCTGCGGAGTTCGGGA
TCGCGTCGGCACCGGTGACAGCCGCTCCAAGCGGTACGCCCTGCAGGGCAGTCGCTGGCGTGTGAAGAACCTCACCTACA
AGATCTCCAAGTACCCCAAGCGGCTGAAGCGAGTCGATGTCGACGCGGAGATCGGTCGCGCATTTGCCGTGTGGTCCGAG
GACACCGACCTGACCTTCACCAGGAAGACCTCCGGCCCCGTGCACATCGAGATCAAGTTCGTGGAGAGCGAGCATGGAGA
CGGCGATGCCTTTGACGGTCAAGGCGGCACCCTGGCGCATGCCTTCTTCCCTGTCTTTGGCGGAGATGCCCACTTTGACG
ACGCGGAACTGTGGACCATTGGCTCTCCTCGAGGCACCAATCTGTTCCAGGTGGCCGCTCACGAGTTCGGTCACTCCTTG
GGACTCTCCCACTCAGATCAGAGCTCCGCTCTGATGGCGCCCTTCTATCGCGGCTTTGAACCCGTCTTCAAGTTGGACGA
GGACGACAAGGCGGCCATCCAGTCACTGTATGGGCGCAAAACAAACCAGCTGAGGCCTACCAACGTGTACCCGGCCACCA
CCCAGCGGCCATACTCTCCTCCAAAGGTGCCACTAGACGACTCCATCTGCAAGGACTCCAAGGTAGACACACTCTTCAAC
TCGGCGCAGGGCGAGACCTACGCCTTCAAGGGCGACAAGTACTACAAGCTGACCACGGACTCCGTGGAGGAGGGCTACCC
ACAGCTCATCTCCAAGGGCTGGCCGGGATTGCCGGGCAACATCGATGCGGCGTTCACCTACAAGAACGGCAAGACGTACT
TCTTCAAGGGTACTCAGTACTGGCGCTACCAGGGCCGTCAGATGGACGGCGTCTACCCTAAGGAAATCAGCGAGGGCTTC
ACGGGCATTCCCGACCATCTGGACGCCGCAATGGTTTGGGGGGGCAATGGCAAGATATACTTCTTCAAGGGCAGCAAGTT
CTGGCGCTTCGATCCGGCCAAGAGGCCGCCGGTCAAGGCTAGCTATCCCAAGCCCATCTCCAACTGGGAGGGTGTTCCCA
ACAACCTGGACGCAGCGCTGAAGTACACCAATGGCTACACGTACTTCTTCAAGGGCGACAAGTACTACAGATTCCATGAC
GCCCGATTTGCTGTTGACTCGGCCACGCCCCCCTTCCCCAGACCCACCGCCCACTGGTGGTTCGGCTGCAAGAACACGCC
CTCGTCCACAGGTAATATCGTCGAAGGCTCGGACAACGAGTTCGAACAGCACTCCATGATCCCGCATGCCGACGATGGCA
ACGGTGATGACTTTGACGCAGGCTTTAAGAGACGCGGATACAAAAACAAGAACAATTAACCACAGCACACATCCAGAAAG
CACAACAGCAACAACAACAGCCGAACAAAACGAACATCGACTCCATAACAACCCACACCACCACCACATCCACATCCACA
TACATAAGACTCATGGCGCAGAAGAATCACAAAGCGAATGAGCCGCCATAGCACATGGCATTCGGTCTTCTGGCTGCTTG
CTACTGTCTTTCTTCTCCTTTCCCGCCTCTTCTCCCGTACATATATCTTGTGTGTGTAGTTGTAGTGCGGCAATGCTGAT
TCTTCCTGCTCACACGTAGTATCATCCTGTTTTAGACTGCTAGACCCCATCGCATCGCACATCCCGTCCTCCCAGAATGC
AACCTTGATATTGCTTTATTCAATACTTTTGTTCTTTAAACGAATATTTTTATTTGCGGCTCTCATACTCGCACCGATCT
ACACAGCACCGCAAGTGCCGAGTCTGAATCCCAACCCGAACCAGGGCATTCTGCCCAGCTGGATGTGGGGCCTAACGAAC
AGATTCTTCTAGTCTAGAGGATCTGGTGCTCATCCGTGTGTTGTAGCCAGTCCCGTTGTAATTTGCCAGCATTAGTGTAA
TCCATCGCCCGCATGAGTGATCTCTGTCTGAATAAAGTAAACCATCAATCGAAACATACAAAACATGCCACGCCCACGAA
CTGCGCCGCCTGCCGAAACGCCAAACCAAGCCAAATAGAAAGAAACGAGTTTTCAGAAGAGTGAAGACCGTGGGCGATCA
CCAGTCCAACGACGAACCAATAGTTCCGGAAGTGGCCGAGCGAACCGGAAACGGAGCCATGTCCCAGTCCAAGCTGACGA
GCAGCTCCGCCGTGAGCACTGTGATCACCACCATCCTGATGTGCCTCGTCTCCAAGCTCATCGTTAGCTAAAAGAGCTAA
GAGATACCAGCGACCTACGGGCAGTGCATTTGTGAACCTTAGGATCAACGCTAGCCACTCGAGTAAAGTTTCCAAAATTT
TACTGCACGTTGGACACCGAAGTGCTTGAAATTCAAATGTTACGCACATCATATCGAATACGATGAGAGGAAATCCAAAA
AAGAATAATGAAAACATACAAATTGAAATCGAACAGAATATCAATTGTAAATTGAGCGATCAGCATGTGACACAGGTGCC
TTATCAAATACTTTTGTTGTTGTGTAAATAAAATCAGCCTTAAATATAATGAAATAGTTTATAACATTCCGCATTCAAAT
CACAAAACGATCAAAAGTCATATCAAACCAGAAGTTCTCTACGTAGTTTTGCTGTTTTGGTAATGACAAATTGCGATATT
AAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAAAATAAAATACTGAGCATTGAACGTAATTTAGTTTA
GATATAATTGTTAATGTCGGCACATGGGAAAGGAGCTCCGCATGCTCCTCCAGCTGTGCTACAATTTCGCAAACTCAAGT
GTTTTAAGTTTACAAAACGATACGTGACTTGACCATATATAAACTAATATGAAAATCATCATCGAGTACATATGATTATT
ATATAAGTGATATTTAAGACAGTCCATTAAACGATATTTTTTCGGGTTTAATATTTAAAACCGAAATATTATTTAACTTA
CGTATTATTATGTATTATTATTAATATTATATACCATAAATGTACGCTGAAATAAGAGAAACTGAACAAAAACGAAAACG
AAGATACAACAAATAAAGAAACAGAAGTCCAATAAAAAAT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Mmp1-RC
          FBtr0273263
          3105
          Mmp1-RD
          FBtr0273264
          2389
          Mmp1-RF
          FBtr0304006
          2398
          Mmp1-RG
          FBtr0304007
          2303
          Mmp1-RH
          FBtr0304008
          3024
          Mmp1-RI
          FBtr0304009
          3316
          Mmp1-RJ
          FBtr0304010
          3790
          Mmp1-RK
          FBtr0304011
          3325
          Mmp1-RL
          FBtr0306656
          3781
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Mmp1-PE
          FBpp0292974
          542
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Mmp1-PC
          FBpp0271771
          584
          Mmp1-PD
          FBpp0271772
          541
          Mmp1-PF
          FBpp0292975
          541
          Mmp1-PG
          FBpp0292976
          541
          Mmp1-PH
          FBpp0292977
          554
          Mmp1-PI
          FBpp0292978
          528
          Mmp1-PJ
          FBpp0292979
          512
          Mmp1-PK
          FBpp0292980
          528
          Mmp1-PL
          FBpp0297611
          512
          Comments

          Downstream start site supported by FBrf0155689 and FBrf0131352.

          Transcript terminates at site supported by polyadenylated cDNA.

          Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          Mmp1-RE
          Secondary FlyBase IDs
            References (0)