FB2025_01 , released February 20, 2025
Transcript: Dmel\Mmp1-RF
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General Information
Symbol
Dmel\Mmp1-RF
Species
D. melanogaster
Annotation Symbol
CG4859-RF
FlyBase ID
FBtr0304006
Feature type
mRNA
Associated gene
Dmel\Mmp1
Evidence Rank
Length (nt)
2398
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 18 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTTGAATTTTGCGCGCAGCCCAGGGCGGATGTGTTTAGCGGCGAGAAACCGAAAAAGTCACCACGATAGAATAAGAATC
GCAGTTGGAGTCTAGTGCTATATAAATAGTCGCGAAGAAAGTTATTCGAAAAGTGAATGAGTTCAGTTTTGGGTTTTGGT
TTTTTGGTTTTGAGTTTTGGTTTCTAACGCGGAAACGAGCGGGAAAATGGAAGTGCCAGCGAGCAATTAGTGCAGCCAGA
CATAAAGACACACTCACAGCTCGAAAATACAGCAAAACAAAAGGATTGCGACTGTGAATTATAAAGTATAAATTATAAGC
AACGACAACACATCCACAGCGGAATACGCAGCGACGACAGCGACAACAAACAAGAGAAAGAAATTGATATAAAGTTCAAA
GTGCCAGCGGCAAGTGGAACCACATGACAAATAGACGAGCCTCGGGAGCAACCCACTGCAAAACCACCAACAACTGCAAT
ATTAGCAACAACAGCAACAACAGCAACAAAATGACAAACTGCCAAAGTTCAGTGTTCATAGTCGTAGGCACCCTGTTTTC
CATCATGGCAGCGGCTCAATCGGCACCCGTTTCCACCACCACACAGGCAGAGATCTACCTGTCCCAGTTCGGCTATCTAC
CCGCCTCTGCCCGCAATCCCGCCAGCAGTGGGCTACACGACCAGCGGACCTGGGTGAGTGCCATCGAGGAGTTCCAAAGC
TTCGCGGGACTGAACATCACCGGCGAGCTGGATGCGGAGACAATGAAGCTGATGTCCCTGCCCCGCTGCGGAGTTCGGGA
TCGCGTCGGCACCGGTGACAGCCGCTCCAAGCGGTACGCCCTGCAGGGCAGTCGCTGGCGTGTGAAGAACCTCACCTACA
AGATCTCCAAGTACCCCAAGCGGCTGAAGCGAGTCGATGTCGACGCGGAGATCGGTCGCGCATTTGCCGTGTGGTCCGAG
GACACCGACCTGACCTTCACCAGGAAGACCTCCGGCCCCGTGCACATCGAGATCAAGTTCGTGGAGAGCGAGCATGGAGA
CGGCGATGCCTTTGACGGTCAAGGCGGCACCCTGGCGCATGCCTTCTTCCCTGTCTTTGGCGGAGATGCCCACTTTGACG
ACGCGGAACTGTGGACCATTGGCTCTCCTCGAGGCACCAATCTGTTCCAGGTGGCCGCTCACGAGTTCGGTCACTCCTTG
GGACTCTCCCACTCAGATCAGAGCTCCGCTCTGATGGCGCCCTTCTATCGCGGCTTTGAACCCGTCTTCAAGTTGGACGA
GGACGACAAGGCGGCCATCCAGTCACTGTATGGGCGCAAAACAAACCAGCTGAGGCCTACCAACGTGTACCCGGCCACCA
CCCAGCGGCCATACTCTCCTCCAAAGGTGCCACTAGACGACTCCATCTGCAAGGACTCCAAGGTAGACACACTCTTCAAC
TCGGCGCAGGGCGAGACCTACGCCTTCAAGGGCGACAAGTACTACAAGCTGACCACGGACTCCGTGGAGGAGGGCTACCC
ACAGCTCATCTCCAAGGGCTGGCCGGGATTGCCGGGCAACATCGATGCGGCGTTCACCTACAAGAACGGCAAGACGTACT
TCTTCAAGGGTACTCAGTACTGGCGCTACCAGGGCCGTCAGATGGACGGCGTCTACCCTAAGGAAATCAGCGAGGGCTTC
ACGGGCATTCCCGACCATCTGGACGCCGCAATGGTTTGGGGGGGCAATGGCAAGATATACTTCTTCAAGGGCAGCAAGTT
CTGGCGCTTCGATCCGGCCAAGAGGCCGCCGGTCAAGGCTAGCTATCCCAAGCCCATCTCCAACTGGGAGGGTGTTCCCA
ACAACCTGGACGCAGCGCTGAAGTACACCAATGGCTACACGTACTTCTTCAAGGGCGACAAGTACTACAGATTCCATGAC
GCCCGATTTGCTGTTGACTCGGCCACGCCCCCCTTCCCCAGACCCACCGCCCACTGGTGGTTCGGCTGCAAGAACACGCC
CTCGTCCACAGGTAATATCGTCGAAGGCTCGGACAACGAGTTCGAACAGCACTCCATGATCCCGCATGCCGACGATGGCA
ACGGTGATGACTTTGACGCAGGTGAGTGGGACCGACTCAGCGGTAGTTTTGTTTGAGCTCGAATCGATCTACTGGATCCA
CGAATATCGAATCCCGAACTCTGAAAGTCAAAAAGATCTCATAGAAAGAAGTCTTGTATGAGTTGTTACTTAGCGAGAAG
CAGTTACAAGTAATGAAATGATAATATTAATAAATCCTATCTTTATGGTATGTTTAATTAAGTTAATGTCTATGTAGTGA
AATTCTAGTACTCAAGTCGAATGTGTTTGTCTTTGTTGCCTATGGAAGAAATACATTTATAATACCTATTGAAAAACT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Mmp1-RC
        FBtr0273263
        3105
        Mmp1-RD
        FBtr0273264
        2389
        Mmp1-RE
        FBtr0304005
        3880
        Mmp1-RG
        FBtr0304007
        2303
        Mmp1-RH
        FBtr0304008
        3024
        Mmp1-RI
        FBtr0304009
        3316
        Mmp1-RJ
        FBtr0304010
        3790
        Mmp1-RK
        FBtr0304011
        3325
        Mmp1-RL
        FBtr0306656
        3781
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Mmp1-PF
        FBpp0292975
        541
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Mmp1-PC
        FBpp0271771
        584
        Mmp1-PD
        FBpp0271772
        541
        Mmp1-PE
        FBpp0292974
        542
        Mmp1-PG
        FBpp0292976
        541
        Mmp1-PH
        FBpp0292977
        554
        Mmp1-PI
        FBpp0292978
        528
        Mmp1-PJ
        FBpp0292979
        512
        Mmp1-PK
        FBpp0292980
        528
        Mmp1-PL
        FBpp0297611
        512
        Comments

        Downstream start site supported by FBrf0155689 and FBrf0131352.

        Transcript terminates at site supported by polyadenylated cDNA.

        Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Mmp1-RF
        Secondary FlyBase IDs
          References (0)