FB2025_01 , released February 20, 2025
Transcript: Dmel\sd-RJ
Open Close
General Information
Symbol
Dmel\sd-RJ
Species
D. melanogaster
Annotation Symbol
CG8544-RJ
FlyBase ID
FBtr0308128
Feature type
mRNA
Associated gene
Dmel\sd
Evidence Rank
Length (nt)
4045
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 35 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TTCAGTTTCGAAAAATTTTTCGATGGAAGCAGCCGAGTGCGAATGCGAATGCTCAATGAGAAGAGCTTTTACTGTTTTAC
TTTTTGCCTGAAATACATTTTGAGATAATTTCTTATTGGTAGTTCTGTTTATGCCATCGCTTGCGTCTGTCTGTGTTATT
TCGATTGCGAGAGCTAGTTAACATTAGTTAAAATTAAAACAAACGCCAGCCATAAGATATAATCGAATTGCGGTTTTTTC
TTCTCGTACCGAATTTCCATCCACATCCGCATCCACCATCCGCCATCCGCCAAACCCATCCCGTTCCGTTTGTTCGTCGC
TATCCGTCGGATATGTTGTTCTATCGGTGTACCGTACAAGTACAAGTTCGTACCCAGTCCAAAGCCAAACAGATTGCGCC
GTGTGCCGGTAAAAATAAGCGCAAAGTTTGAGAAAAACCATCAACATCAGATGATGTGCCCTGGAGGAAAAAACGTCGCG
GATTTAATGAAATCTTAAATAATGGGTTCGCTTTAGCACAATTCGACGTTGCATTCGGCCAGCGGTGTGTTGTGTAAACA
AAGTTGTAGTTATAGTTTTAGTTTAATTAGCTTCGCATAAGCTGCAACCGGATCTGAAACAGACCGTGGAAACAAAAAAA
TAATAATAATAATAATAATAATAATAATTGCATTTCATGTATGCCAGTGTAAATTTGCGTTCGTGTGTGCTAAGTTTACA
TATAGAGAGCGTGGAGTGGATTGGGATTGGATAGTGTTGGATTGGATAGTATCCCTATCCGATTCGCGCCGTTATTGTTA
ATGCGCAGTGCATTTATTAAGGAATCCGTCTGATATCAGAACAACCTTAACTAACGCCTTTAAATCAATGATATGGTGGC
CAATTCCCATTCCGTCGAACAATCGAATCGAGCGACTAGATTCGGTAAACATCGACCAAGTGTAAACTCGACTCCCATTA
CCACTGTGTAAATACCAGAAAGTAAATCCAAAAAAAAGAACAATAATTCAACCTGCAGGGGAAACTAAAAACGCACGATA
CACTTATTTGGAAGTGGATTTAAGTTTCAGTAATGCCAGCCAATGAACGACCAATTGCGATACAATACAGAAACACAAAC
AGAAACCGAAACATAAGCGAAGAGTAAATAAATGCAAATTAAAACAAAAAAGCCGGGCTCATGACACAATTGGTCATGTA
AATCGCGAAAGATAAACATAATCCGTATAATTCGTATAAATATCATCGTAGTCGCGACGGTGGAAAATGTGCAGTGCGGT
TAAATCCTAAAAAATGGATCGGTTTTCACTGATAAGCATCCGCATTTGGGTTTATTTCTTCGATCCCTGCAAGGTCCGCG
AAAAAAGTTCGCCGAAGAAGGTGCTGTGAATAGCCCAATCAATCCGCACAGCTCTCCATTTCGAGATAGAGATCTTCTCC
AGCTTTCGGAATCCTCGCACATCTAGACCATATCCTAGCCAATCGGAGCAGCCGCGCAATAAGTAGCATCTAATCCTGGA
GCTTTACACCAATGCGATATGGATTGTGATTACTCGAAGTTTCTGTACAAAATTGGACCCGGCACCATACCATCACCGTG
GACACCAGTGAATGCCGGTCCTCCAGGCGCACTTGGATCGGCAGACACAAATGGCAGCATGGTGGATAGCAAAAACCTGG
ATGTCGGTGATATGAGCGATGACGAAAAGGACTTGTCATCCGCTGATGCCGAAGGTGTATGGAGTCCAGATATCGAGCAG
AGCTTTCAAGAGGCTTTATCTATATATCCGCCGTGCGGACGTAGAAAAATCATTTTATCCGACGAGGGTAAAATGTACGG
TCGCAACGAGCTAATCGCACGATATATAAAACTGCGCACAGGCAAAACGAGAACCAGGAAGCAAGTCAGTTCGCACATCC
AAGTGCTGGCTCGCCGTAAACTCCGCGAGATCCAGGCGAAAATCAAAGTGCAATTCTGGCAACCTGGACTACAGCCAAGC
ACGTCCCAAGACATCAAGCCCTTCCCCCAGCCGCCGTATCCAGCTGGCAAAACGTCGACTGCGGTTTCCGGGGACGAAAC
TGGAATTCCGCCCTCACAATTGCCCTGGGAAGGACGAGCCATTGCCACGCACAAATTCCGCTTACTCGAGTTTACGGCGT
TCATGGAAATCCAGAGAGATGAAATTTATCACCGGCATCTATTCGTTCAACTTGGCGGCAAGCCATCCTTTTCCGATCCA
TTGCTTGAGACTGTTGATATACGGCAAATATTCGACAAGTTTCCGGAGAAATCTGGGGGACTTAAAGATCTCTACGAAAA
GGGTCCACAGAATGCGTTTTACCTAGTTAAATGCTGGGCGGACCTGAATACCGATCTAACAACCGGCAGCGAAACGGGTG
ATTTCTATGGCGTAACCAGCCAATACGAAAGCAACGAGAATGTCGTGCTCGTGTGCTCCACAATCGTTTGCTCCTTTGGC
AAGCAAGTGGTGGAGAAGGTGGAAAGCGAGTACTCTCGACTGGAGAACAATCGCTACGTCTATCGCATTCAACGCTCCCC
CATGTGCGAGTACATGATCAACTTTATTCAGAAGCTGAAGAACCTACCGGAACGCTATATGATGAACAGTGTGCTGGAAA
ACTTTACAATATTGCAAGTAATGAGGGCCCGCGAGACGCAGGAGACACTGTTGTGCATAGCCTATGTGTTTGAGGTGGCG
GCCCAGAACAGCGGCACCACCCATCACATATACCGTCTAATTAAGGAATAGCAAAAGCTGCATGGAGCAGAACCCAACCT
GTCTGCGAATCCCATCATCAACACACAAGTTCACAAATATACCGACAACAACAACAGCAGCAGCATCAACAATAATAGTA
TCATCAATACGGCTAAGAATTGCGATAATAAGACGAGTAATGAAATTGCCAACACAATATCCAACACCAAGAGTGCCAGA
ATCATCAGCAGTATCAACAGTATCAACAGCATCAGCAACACCAGCAACATCGGCAACATCAGCAACATCAGCAACATCGG
CAGCAGCAATAGCAACACTATCGCACTAAAATGTGGCGACGGCAATATGAAAACCAGGAACCTATCCGTTGCTGGCGCCA
CAATTATCAAGCAATCACTCACCTCACCGCAACATCATACGGATATCGATGCCTTGACAGCACTTCAAGTGGAGGAGGTT
ATTTATACACAGTCACAAGGGAATACCAGTTATCAATTAGACACCGAAACAAGCATTGCTCCCAACGTACAAGAGCCAAC
ACTCCAGCAGCAACATACCGCCTATGAGGATCGTACAGTGACAGTCCTGCCACCGTATAATCTATGTATCGGCAACAAGC
AACCACAACCATTCGAGGCTGAGCAACACGAACACGAACACGACCAGGAACAGGAACTGGAACTGGAACTGGATCAGGAA
CAGCAGAAGCAACTGGGGAACACGGGCTATGAGCAGTTCCTGAAGTTGTCCGCTCATGAATATTCAGAAACTGACAGACG
CTCCGCGGCTGCTCTAAATCTCAGCAGTATTGGCGAAAAAGAAGCGGCATTGGTCGGTGAATCCAAGACGGATCTTGAAG
ATCCGCCAGAGTTTCGGATGCTTCGAGAGGTCAGTGCGACAGCGGCGGAGGATCCACGACGAGGACCCAACGCCGATGGA
ATCAGTAACAAAGGCCGTGAGCCGTGAGCGCCATATAATACCACCAGCCTTTAAGCAAGGTTGAGGCTTATTTTAAGGGT
TAGAAATACGATTGCAAGGAACGACACAATCAGAGCTTTTTGTTTTCCACCCAAAACGAGAAAGAAAAAAAATGAAAAAA
AAAACCACATGGCAGGGGACAATGGAAGAGCCTCAAAACAAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTT
TATTTGTGCAAAATAAAAAATGTATCATATTTTATGTTACAATCATTTGAAAGACTCAAAAAACAACCGACTTTAGTTCA
GCATAGAGTGCTTTCTGTAAAATTGTACTATAATACATAAAAAAC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        sd-RA
        FBtr0074100
        2677
        sd-RB
        FBtr0074099
        3194
        sd-RC
        FBtr0074101
        2841
        sd-RD
        FBtr0112824
        3288
        sd-RE
        FBtr0112825
        3252
        sd-RF
        FBtr0112826
        3047
        sd-RG
        FBtr0112827
        3139
        sd-RH
        FBtr0301543
        3237
        sd-RI
        FBtr0301544
        3280
        sd-RK
        FBtr0308129
        3113
        sd-RL
        FBtr0308130
        2527
        sd-RM
        FBtr0308131
        5331
        sd-RN
        FBtr0308132
        3471
        sd-RO
        FBtr0308133
        3781
        sd-RP
        FBtr0308134
        3355
        sd-RQ
        FBtr0310311
        3670
        sd-RR
        FBtr0310312
        3076
        sd-RS
        FBtr0310313
        3164
        sd-RT
        FBtr0340115
        2666
        sd-RU
        FBtr0346799
        6005
        sd-RV
        FBtr0479844
        5331
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        sd-PJ
        FBpp0300450
        410
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        sd-PA
        FBpp0073915
        370
        sd-PB
        FBpp0073914
        440
        sd-PC
        FBpp0089157
        370
        sd-PD
        FBpp0111736
        410
        sd-PE
        FBpp0111737
        440
        sd-PF
        FBpp0111738
        440
        sd-PG
        FBpp0111739
        440
        sd-PH
        FBpp0290758
        435
        sd-PI
        FBpp0290759
        435
        sd-PK
        FBpp0300451
        440
        sd-PL
        FBpp0300452
        370
        sd-PM
        FBpp0300453
        435
        sd-PN
        FBpp0300454
        370
        sd-PO
        FBpp0300455
        410
        sd-PP
        FBpp0300456
        410
        sd-PQ
        FBpp0301994
        625
        sd-PR
        FBpp0301995
        440
        sd-PS
        FBpp0301996
        440
        sd-PT
        FBpp0309110
        375
        sd-PU
        FBpp0312377
        410
        sd-PV
        FBpp0428180
        747
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        sd-RJ
        Secondary FlyBase IDs
          References (0)