FB2025_01 , released February 20, 2025
Transcript: Dmel\OtopLa-RD
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General Information
Symbol
Dmel\OtopLa-RD
Species
D. melanogaster
Annotation Symbol
CG42492-RD
FlyBase ID
FBtr0310285
Feature type
Associated gene
Evidence Rank
Length (nt)
5914
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 30 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          AGAAGCGAACTTTTGCGAGTGATGGAAGACACTGCCTCTTCAGACCGGTGCCCAAATACAATAAATAAGACGCAGGACAA
          TAATAGCCTTAAATCTGTCGAATCAAAGCGAAACGAAACGAAGCGAAATAAATAGGAAAGTAAAAACGCGCGCGCAACAG
          ACGCCACGCCCCCCCGCCCCCATCGACGTCATCCTCCTGCTCACGAGCGGAAGCAAAACAAAAGGAAAACAGGACAGCAG
          GCGAAAAAGGAAGCGAAAGCAGAACAAAGGCAACGCATATGAGCTGAACGGCAGGATATAACCCCCAAAAAAAAACGACC
          AATTTGCGCAACCAAAAGTCTTGAGTATTCAACTGCTGCTGCAAACCATAGGGAGGAGGATCGGGAGCGAGCGTGCTGAG
          CGAGGGGAAAGGAATGCAGCGGTGTCCCTACATTCATGAGATGCGCGAAAGATTACTGGACCAGCCGCGGGAGACACTTC
          AACTGGAGAACATGGAGCGGGCCAATTTGCTCGACAACCGCCAATCGGCATCCGAATCCAACCAGCTGCAGGGCGATGGC
          TATCACACGAGTCCTGCCCACCAGCGTACTCCACTAGTGCCGCACGATCTCGGCGAGGACTTCAATTTGGATTTCGACGA
          CGACTTCCCGATCGATGCGCGCCGACCGAAAAATGCCAACGACATACATCCAGCGGTTCTCACGCGCCCACAGCAAAGGA
          CATCGCTGTTCATCGTGACCAGTCTGGTGTACGCGATCCTTCTGATCGTCGTGTGCATTGCATACGTTATCAGCGATGTA
          ACCACCCACCGACTGCCGGTTTTGTACTACGAGACATTCTTCACATATCTATACGGCGTCAGCATACTCTTCCTTCTCTA
          CGTCTTCTGTTTCCTGCTGCAGGAGAGCTCTTGCTGCAATGGCGGCAATGGTGGCAGCAAACCGAAACCCCAGCCCAAGG
          AGAAGAAGTCGAAGAAAGCCAAAAATGCCGATCCGGCCGATTCGAAGGATGCGAAGGGCTCTAAGGACTCTGGCAAGGCA
          GCCAAGGGCGCCGCATATCAGCACACACTGGCCAAGTTTCTGGAAGCACCCGTGGACGCCGAGGTGGCCGTCACTCCAAA
          GAATGTGCGCAAGCGCAAGACAACCCATAGTGATCTGACGCACGGCAGCTTTTTCCTGCGAGTGGGAGCCATTGCTTTCG
          GTTTGGGCGCCATGATCTATATTGGCCTGGAGTTTGGATCGTTCTTTGAGATACCCTTCGATTCGCCGTGTCATCACATC
          CTGATCGGCGTAAATCCGCTGCTCCAGATGATCTTCACCTTCATGCAGATGTACTTTATATTCATGAATGCCCGGACTAG
          GCCGCCATTTCAGCTGAACATCCATCGCTTCAAGGTGATCGCTCGCTTTGGCCTGATGCATGTGGTGGCCACCAACATTT
          GCGTATGGATTCGCACCCTGGTTAAGGAATCGCTGCTGGAGATCACGATCTATCATCAGAAGAACGAGCCAGAGGCCGGC
          GCCTCGTCCATAGCCCACTCGATTCGTCAGCACGCCCTGCGGCATGCGGGCACCGTGCTGCGCACCCATGCGGGACCCAA
          CAGCGAATTCGAGGTGCTCGACGGCGAGGACATTCTGCCCAAGGATGTGTACAAGAGCGACAATGTGCTATCCAAGCTGG
          TGCGCAATACCGTCGATGGTATTTCAAAGAGCCTGGGCATGGGCGGTGACCAGGCGCTAGACAGCAGCACCACCAGCAGC
          AGCACCACAACGACCACGCGAGCTCCGTTCACCACACCGAACTACCAATGGCACAGCACTACTATGGCCCGCAAGCTGAA
          GAAGTTTATCACCAGCGCCACCACCGCGGCCACAACGGCGGCGGGCAGCAGCAGCACCGCCAGCAGTACCACCACCATTT
          CACCGACCATCAGTAGCACCACCATTCCGTCGACCACCATCAGTAGCACCACCATCTCATCGAGCACCACTTTCAGTCCA
          TTTAGCCCCTCCACCACCACCACCACCACCACCACCGCTGCCGCCCTGAATCTCGAGACCAGCGGCAGTGAATCGCCCTT
          CGGCGGCCTGCAGCGCATCCTCTCTAGCGCTGCGCCGCCGAGCCTGGCGCCAGTCGATGGGTTCGGTTCCGCTTCCGCTG
          CCACGCCCACATCCGGTTCCGGCGCCGGCTCATTTGTAGACTCCTTCCTGGCCAGCACACTAAGCCCGGCCAGCAGCACC
          GAGGGCTCGGCCAGCATTATGAACAACCTTTTCGGCCAGGGACCCATGGAGAATAGCTTCCAGACATACACCGATCTGGG
          CCACGAGGAGGCCACCGGTCTGGTGAGCTTCGAGAATCTAGAGAGTCTGGACAACATATACCCGGCGGCGCTGTCCTCCA
          ATATCGGCACACTCAACTCCACCGCCTGCGGACGCATCGACATAATGGGCACCATTGTCTACGATTCGGCGCCCTACCTC
          TATCCGTTCATCATCGAGTATTCGCTGATCGGGGCGGTGGTGTTGTATGTCATGTGGAAGCACATCGGCCGCTATCCGGG
          CCGGATGAACGACGAGGATTTGGAGCATCGGCTGGAGGTGATGTTATCGCGGCGGGCGGTTGCCATGGCGCAGCAGGCGC
          GATCCGGACGCGTCGACTGCGTCGGCTCGTCGAAGGGCCTGTTCTTCGGGCTCCTGCTGCTGGTCGGGGCCCTCATCTGC
          CTGATACTCTTCTTCGTCTTGGTGCGCCATCAGCAGTTCTCGCTGTTGGCCATTTACCTCGCCGACGCCAGCCACTGCAT
          CCTGATGGCGTTCGCCATTCTGGCCATTATTGTGGGATTCATCAGGGTCAAAAACCTGAAGTTCCGCTGCGAGGAGCAGT
          CCAATCTGAACGACATCTTGCTGCGCATCTCGGCCTTCGGCCTGTTCACCTACTCCGTGTTCAGCATTATCGCCGGTAGC
          CTGAAGGTCCTGGAGAGCGAGCCCAGCCTGCTGGTCACGACCACCGGTGGTGTGGCCGTCTTCCAGGTGATCCTGCAGCT
          GCTGTTCATCGCGGACGTGTCCCGCCGTCGCGTCCACCTGCCGGAGCACGACCGGAGCAAGCCGGGCCGCCAGATCGTCA
          CGTTCCTTCTCATCTGCAACGTGGCCATGTTCGCCATCTACACATTCGAAGCTCAAAAAGTATTCGCCAATCCTGTAAGT
          AGATATGTTCAGCTGGAGTTCTACGGCTTCGTGCCCTGGTCGATCATCCAGCGCATCACACTGCCGCTGTGCATCTTCCA
          TCGATTCCACAGCGCCGTGACACTCGCCGAGATCTGGAAGACCACCTACAAGGCACGTCTGGAGTAAGGCGATGCCTGGA
          TCCCGATGTCTATATAGGCCGATGATGGGTGGGAGTTATGAAAATGCACCAAAACCAAAATGTAGCGAGCCGAGAACGCG
          AACGGAAATCAAGTGAAGAGTTAGGTTCTAATTACGTACTAAACATATATGCATACTACATATAATATATACATTAGTGC
          AGATATGTACGAGAGCATATTATGACGTTTTTTTTTTTGTTTGAGGAAACCAAAGCGAAACGAAATGAGTAACGAAACGA
          ACGAAACAATCGGACCAATCTGCGCGATTAACAATTAACGATTGCCAACCGATAACGATTGCAGGTCGCTTGTTCATTTC
          CCCCCACCACAAAAACACTTTCCTTTTTTACTTTGTTAACTCGTGGAGAACTTAAGAACCTTAAGATCTAAGTCATAGCG
          TTTACAGTTTAACGAAAAACTTAGAACCAAGAACCACGGCACATGTTTTTAATCTGATTTACGTATTTAATTTAGTTTTA
          GTTTAGTTTCGCCTCTAACACGCTGCAATATCTTGTTACTAAATCGAAACTACAAGTTAATATTAATTTCATAATTGTTT
          AACCATTATCCGCTTCGGCAACCGAAACCAAAACGAAATCGATTAAAAAAATTCACATTACAAATAAGATGGAAAATATT
          CTGAAAACACAAAACAAATGGTTGTTTACTTTTCGCGTGTTTTTCGCGACTGCGAATGAGGGGAAATCCCCGTGACTATA
          CACTGAAACACAAAACAGGGACACACAATGATGCAATGCCATGAAGAACGCGGCCACAGGAAACGGAAATGAAACGAAAC
          GGTAACACAGCCCGGAAACGGAAACGAAATTCGATCTGATCTGACTTTTCCACCAATCGAGAACAACAACAACAAGAACA
          ACAGTAACAGCCGAACAACAACAAACTGTGATGAATTCATATGATTTACTGGTATAATTTGCAATTCGATTACATTTCTG
          TTCCCGACTTGATTTAAGCCTTTAAGCCCTTTCGTTTTTTTATTCTCAGCCACAAGTCACTAACTGAGTCGACAAAACTT
          TTGTAAGAATTTAGAAACAATGGCGCTAAGACAACTTCATGGCCAATTGTAAAAACAAATTGCCCGAAACACCATTACTA
          AAAACAAAATAATACAAAAAAAAAAACCCAAAGAAAACAAAGAAAATTGTGGCATTTAATGGCCAGAAATACAAAAAACC
          ACAAAATAAAAAAAAAAAACATTTTTAATATACATTATATAAAAGTTTATAAATGTCCATTTTTTGATTATTAGTAGTGA
          TGTTAAAAGAAAAAACATAATTAACGGTAAAAATAATAATATGTATGTATGTTATAGCAGAGAATCGGATAAACCAAACC
          AAACACAAATTCTTAAGCAACACTCGAATGAAAAAATGAGAAATTGCGAAGCAAACGAATAACTTTCCAAGTGAAATCCC
          CGCATTTATGAATGAAAATGAATTTTTAGCTAAAGCGATATGGAAAACAAAATGGGAGTCATTCTGCCGATGATGATGAC
          AGGTAAAACGGATAGGTACGGAGAAACCATTGACAAGCATCAAATTGTTTACAATTTACAATGTTAAAAGAAACGAACAT
          TTTGAAAGATATATATGCCACGTATATCTATAAATATATGTATACTAACCCACCAAATTCAAAGTATTTCAACGTTTTAT
          ACAAGGAGACGATGCGCAAGACAAGAGATCGGGACAGCTAACCCCCTGTCCTGACCCCTGACCACTGACCCCTTTGAAAT
          CCAAATACCCAGAGAATCCCTCCATCTCTCTCTCTCTCTATGAAACCATTCTACACCCATTCACACTCATCCACATTCCC
          ATTCCCATACCCATATCAATTCCCATTCGAAATACAGCTGCAACTCGAGTCAGAAGGCATCAGTTTGCTAAAAGACCAAA
          GAAGATAAACGAAACGATTAATTGAGAATCCGATTATAATCTGTAATCATAATCCAGTCTGCAAGTCTATATAATGCATG
          TTAACTGTAGGCGCGGGGAGTTCAACAAGAATACGTATTCAATACTCGTAATCCAATCAAATGTAATGTGGTAGCAAGCT
          AGGTAAACCAAGCCAAAAAATCGAACAAACCATAAGTAGTTCAGCACACGCTCAGTCACCCAAGCGGATCTGGATCTGGA
          TCTGGATCTGAATCTGAATCTCTGATCTGAATCGTAGGATCCGTATCGGGGGAATCATATATCCAAAGTTTGCGAATCAA
          ATTCAGTTTGAAACTTGTACTTGCGTAGGCTCTTAGAAATTGTACTTGAATGCATACGCTACATAAATCACAGACATATA
          TATTTAACTATGCGTATATATATAAATATTTATTTATTTATATATATATATATATACATATAATGCAAATAAATTCAATT
          GTTTTTTCCTTAACATTTAGTTAAACGTAAGATCAAATCATATTTTATGCCGTACAACCGAACAGAAAAGTGAGCAGAAA
          GAAATATTTATTAAATGTTTCAACTAAGTTGTATAATTATAAGTGAGAGTTTACATAATGGAATTATGTATCTG
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0300466
          4210
          FBtr0300465
          4253
          FBtr0310286
          6757
          FBtr0336689
          4355
          FBtr0336690
          4154
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0301968
          977
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0289693
          916
          FBpp0289692
          991
          FBpp0301969
          979
          FBpp0307670
          917
          FBpp0307671
          958
          Comments

          Extended 3' UTR based on EST and RNA-Seq data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG42492-RD
          OtopLa-RD
          Secondary FlyBase IDs
            References (0)