FB2025_01 , released February 20, 2025
Transcript: Dmel\OtopLa-RG
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General Information
Symbol
Dmel\OtopLa-RG
Species
D. melanogaster
Annotation Symbol
CG42492-RG
FlyBase ID
FBtr0336690
Feature type
Associated gene
Evidence Rank
Length (nt)
4154
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 20 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        AGAAGCGAACTTTTGCGAGTGATGGAAGACACTGCCTCTTCAGACCGGTGCCCAAATACAATAAATAATGCAGTGAGAAA
        AGTGCTAAACAACAAATAGGCAAATAAAAACAGGAAGCTACACTTTTTTGGCACTGCGTCGTCCATTTTGTCTGTTGTGC
        GTGGTGTGCCAGTGTGTGCGTGTGTGTGCGTGCGAGTGACTGAGTCTGTTTCCGGTCCAGTCAATCAACAGACTTGCTTG
        TATTTTGCACTCGTATTTTGGCCAAAAAGGACGCAGGACAATAATAGCCTTAAATCTGTCGAATCAAAGCGAAACGAAAC
        GAAGCGAAATAAATAGGAAAGTAAAAACGCGCGCGCAACAGACGCCACGCCCCCCCGCCCCCATCGACGTCATCCTCCTG
        CTCACGAGCGGAAGCAAAACAAAAGGAAAACAGGACAGCAGGCGAAAAAGGAAGCGAAAGCAGAACAAAGGCAACGCATA
        TGAGCTGAACGGCAGGATATAACCCCCAAAAAAAAACGACCAATTTGCGCAACCAAAAGTCTTGAGTATTCAACTGCTGC
        TGCAAACCATAGGGAGGAGGATCGGGAGCGAGCGTGCTGAGCGAGGGGAAAGGAATGCAGCGGTGTCCCTACATTCATGA
        GATGCGCGAAAGATTACTGGACCAGCCGCGGGAGACACTTCAACTGGAGAACATGGAGCGGGCCAATTTGCTCGACAACC
        GCCAATCGGCATCCGAATCCAACCAGCTGCAGGGCGATGGCTATCACACGAGTCCTGCCCACCAGCGTACTCCACTAGTG
        CCGCACGATCTCGGCGAGGACTTCAATTTGGATTTCGACGACGACTTCCCGATCGATGCGCGCCGACCGAAAAATGCCAA
        GACATCGCTGTTCATCGTGACCAGTCTGGTGTACGCGATCCTTCTGATCGTCGTGTGCATTGCATACGTTATCAGCGATG
        TAACCACCCACCGACTGCCGGTTTTGTACTACGAGACATTCTTCACATATCTATACGGCGTCAGCATACTCTTCCTTCTC
        TACGTCTTCTGTTTCCTGCTGCAGGAGAGCTCTTGCTGCAATGGCGGCAATGGTGGCAGCAAACCGAAACCCCAGCCCAA
        GGAGAAGAAGTCGAAGAAAGCCAAAAATGCCGATCCGGCCGATTCGAAGGATGCGAAGGGCTCTAAGGACTCTGGCAAGG
        CAGCCAAGGGCGCCGCATATCAGCACACACTGGCCAAGTTTCTGGAAGCACCCGTGGACGCCGAGGTGGCCGTCACTCCA
        AAGAATGTGCGCAAGCGCAAGACAACCCATAGTGATCTGACGCACGGCAGCTTTTTCCTGCGAGTGGGAGCCATTGCTTT
        CGGTTTGGGCGCCATGATCTATATTGGCCTGGAGTTTGGATCGTTCTTTGAGATACCCTTCGATTCGCCGTGTCATCACA
        TCCTGATCGGCGTAAATCCGCTGCTCCAGATGATCTTCACCTTCATGCAGATGTACTTTATATTCATGAATGCCCGGCTG
        AACATCCATCGCTTCAAGGTGATCGCTCGCTTTGGCCTGATGCATGTGGTGGCCACCAACATTTGCGTATGGATTCGCAC
        CCTGGTTAAGGAATCGCTGCTGGAGATCACGATCTATCATCAGAAGAACGAGCCAGAGGCCGGCGCCTCGTCCATAGCCC
        ACTCGATTCGTCAGCACGCCCTGCGGCATGCGGGCACCGTGCTGCGCACCCATGCGGGACCCAACAGCGAATTCGAGGTG
        CTCGACGGCGAGGACATTCTGCCCAAGGATGTGTACAAGAGCGACAATGTGCTATCCAAGCTGGTGCGCAATACCGTCGA
        TGGTATTTCAAAGAGCCTGGGCATGGGCGGTGACCAGGCGCTAGACAGCAGCACCACCAGCAGCAGCACCACAACGACCA
        CGCGAGCTCCGTTCACCACACCGAACTACCAATGGCACAGCACTACTATGGCCCGCAAGCTGAAGAAGTTTATCACCAGC
        GCCACCACCGCGGCCACAACGGCGGCGGGCAGCAGCAGCACCGCCAGCAGTACCACCACCATTTCACCGACCATCAGTAG
        CACCACCATTCCGTCGACCACCATCAGTAGCACCACCATCTCATCGAGCACCACTTTCAGTCCATTTAGCCCCTCCACCA
        CCACCACCACCACCACCACCGCTGCCGCCCTGAATCTCGAGACCAGCGGCAGTGAATCGCCCTTCGGCGGCCTGCAGCGC
        ATCCTCTCTAGCGCTGCGCCGCCGAGCCTGGCGCCAGTCGATGGGTTCGGTTCCGCTTCCGCTGCCACGCCCACATCCGG
        TTCCGGCGCCGGCTCATTTGTAGACTCCTTCCTGGCCAGCACACTAAGCCCGGCCAGCAGCACCGAGGGCTCGGCCAGCA
        TTATGAACAACCTTTTCGGCCAGGGACCCATGGAGAATAGCTTCCAGACATACACCGATCTGGGCCACGAGGAGGCCACC
        GGTCTGGTGAGCTTCGAGAATCTAGAGAGTCTGGACAACATATACCCGGCGGCGCTGTCCTCCAATATCGGCACACTCAA
        CTCCACCGCCTGCGGACGCATCGACATAATGGGCACCATTGTCTACGATTCGGCGCCCTACCTCTATCCGTTCATCATCG
        AGTATTCGCTGATCGGGGCGGTGGTGTTGTATGTCATGTGGAAGCACATCGGCCGCTATCCGGGCCGGATGAACGACGAG
        GATTTGGAGCATCGGCTGGAGGTGATGTTATCGCGGCGGGCGGTTGCCATGGCGCAGCAGGCGCGATCCGGACGCGTCGA
        CTGCGTCGGCTCGTCGAAGGGCCTGTTCTTCGGGCTCCTGCTGCTGGTCGGGGCCCTCATCTGCCTGATACTCTTCTTCG
        TCTTGGTGCGCCATCAGCAGTTCTCGCTGTTGGCCATTTACCTCGCCGACGCCAGCCACTGCATCCTGATGGCGTTCGCC
        ATTCTGGCCATTATTGTGGGATTCATCAGGGTCAAAAACCTGAAGTTCCGCTGCGAGGAGCAGTCCAATCTGAACGACAT
        CTTGCTGCGCATCTCGGCCTTCGGCCTGTTCACCTACTCCGTGTTCAGCATTATCGCCGGTAGCCTGAAGGTCCTGGAGA
        GCGAGCCCAGCCTGCTGGTCACGACCACCGGTGGTGTGGCCGTCTTCCAGGTGATCCTGCAGCTGCTGTTCATCGCGGAC
        GTGTCCCGCCGTCGCGTCCACCTGCCGGAGCACGACCGGAGCAAGCCGGGCCGCCAGATCGTCACGTTCCTTCTCATCTG
        CAACGTGGCCATGTTCGCCATCTACACATTCGAAGCTCAAAAAGTATTCGCCAATCCTGTAAGTAGATATGTTCAGCTGG
        AGTTCTACGGCTTCGTGCCCTGGTCGATCATCCAGCGCATCACACTGCCGCTGTGCATCTTCCATCGATTCCACAGCGCC
        GTGACACTCGCCGAGATCTGGAAGACCACCTACAAGGCACGTCTGGAGTAAGGCGATGCCTGGATCCCGATGTCTATATA
        GGCCGATGATGGGTGGGAGTTATGAAAATGCACCAAAACCAAAATGTAGCGAGCCGAGAACGCGAACGGAAATCAAGTGA
        AGAGTTAGGTTCTAATTACGTACTAAACATATATGCATACTACATATAATATATACATTAGTGCAGATATGTACGAGAGC
        ATATTATGACGTTTTTTTTTTTGTTTGAGGAAACCAAAGCGAAACGAAATGAGTAACGAAACGAACGAAACAATCGGACC
        AATCTGCGCGATTAACAATTAACGATTGCCAACCGATAACGATTGCAGGTCGCTTGTTCATTTCCCCCCACCACAAAAAC
        ACTTTCCTTTTTTACTTTGTTAACTCGTGGAGAACTTAAGAACCTTAAGATCTAAGTCATAGCGTTTACAGTTTAACGAA
        AAACTTAGAACCAAGAACCACGGCACATGTTTTTAATCTGATTTACGTATTTAATTTAGTTTTAGTTTAGTTTCGCCTCT
        AACACGCTGCAATATCTTGTTACTAAATCGAAACTACAAGTTAATATTAATTTCATAATTGTTTAACCATTATCCGCTTC
        GGCAACCGAAACCAAAACGAAATCGATTAAAAAAATTCACATTACAAATAAGATGGAAAATATTCTGAAAACAC
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0300466
        4210
        FBtr0300465
        4253
        FBtr0310285
        5914
        FBtr0310286
        6757
        FBtr0336689
        4355
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0307671
        958
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0289693
        916
        FBpp0289692
        991
        FBpp0301968
        977
        FBpp0301969
        979
        FBpp0307670
        917
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG42492-RG
        OtopLa-RG
        Secondary FlyBase IDs
          References (0)