FB2025_01 , released February 20, 2025
Transcript: Dmel\OtopLa-RE
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General Information
Symbol
Dmel\OtopLa-RE
Species
D. melanogaster
Annotation Symbol
CG42492-RE
FlyBase ID
FBtr0310286
Feature type
Associated gene
Evidence Rank
Length (nt)
6757
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 30 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          AGAAGCGAACTTTTGCGAGTGATGGAAGACACTGCCTCTTCAGACCGGTGCCCAAATACAATAAATAATGAGAAAAGTGC
          TAAACAACAAATAGGCAAATAAAAACAGGAAGCTACACTTTTTTGGCACTGCGTCGTCCATTTTGTCTGTTGTGCGTGGT
          GTGCCAGTGTGTGCGTGTGTGTGCGTGCGAGTGACTGAGTCTGTTTCCGGTCCAGTCAATCAACAGACTTGCTTGTATTT
          TGCACTCGTATTTTGGCCAAAAAGGACGCAGGACAATAATAGCCTTAAATCTGTCGAATCAAAGCGAAACGAAACGAAGC
          GAAATAAATAGGAAAGTAAAAACGCGCGCGCAACAGACGCCACGCCCCCCCGCCCCCATCGACGTCATCCTCCTGCTCAC
          GAGCGGAAGCAAAACAAAAGGAAAACAGGACAGCAGGCGAAAAAGGAAGCGAAAGCAGAACAAAGGCAACGCATATGAGC
          TGAACGGCAGGATATAACCCCCAAAAAAAAACGACCAATTTGCGCAACCAAAAGTCTTGAGTATTCAACTGCTGCTGCAA
          ACCATAGGGAGGAGGATCGGGAGCGAGCGTGCTGAGCGAGGGGAAAGGAATGCAGCGGTGTCCCTACATTCATGAGATGC
          GCGAAAGATTACTGGACCAGCCGCGGGAGACACTTCAACTGGAGAACATGGAGCGGGCCAATTTGCTCGACAACCGCCAA
          TCGGCATCCGAATCCAACCAGCTGCAGGGCGATGGCTATCACACGAGTCCTGCCCACCAGCGTACTCCACTAGTGCCGCA
          CGATCTCGGCGAGGACTTCAATTTGGATTTCGACGACGACTTCCCGATCGATGCGCGCCGACCGAAAAATGCCAAGCATC
          CAGGGGATTATAGTGTCAATGAACTGGACGCAAGGCACATTGCCTTACATTTCCGATGGACATCGCTGTTCATCGTGACC
          AGTCTGGTGTACGCGATCCTTCTGATCGTCGTGTGCATTGCATACGTTATCAGCGATGTAACCACCCACCGACTGCCGGT
          TTTGTACTACGAGACATTCTTCACATATCTATACGGCGTCAGCATACTCTTCCTTCTCTACGTCTTCTGTTTCCTGCTGC
          AGGAGAGCTCTTGCTGCAATGGCGGCAATGGTGGCAGCAAACCGAAACCCCAGCCCAAGGAGAAGAAGTCGAAGAAAGCC
          AAAAATGCCGATCCGGCCGATTCGAAGGATGCGAAGGGCTCTAAGGACTCTGGCAAGGCAGCCAAGGGCGCCGCATATCA
          GCACACACTGGCCAAGTTTCTGGAAGCACCCGTGGACGCCGAGGTGGCCGTCACTCCAAAGAATGTGCGCAAGCGCAAGA
          CAACCCATAGTGATCTGACGCACGGCAGCTTTTTCCTGCGAGTGGGAGCCATTGCTTTCGGTTTGGGCGCCATGATCTAT
          ATTGGCCTGGAGTTTGGATCGTTCTTTGAGATACCCTTCGATTCGCCGTGTCATCACATCCTGATCGGCGTAAATCCGCT
          GCTCCAGATGATCTTCACCTTCATGCAGATGTACTTTATATTCATGAATGCCCGGCTGAACATCCATCGCTTCAAGGTGA
          TCGCTCGCTTTGGCCTGATGCATGTGGTGGCCACCAACATTTGCGTATGGATTCGCACCCTGGTTAAGGAATCGCTGCTG
          GAGATCACGATCTATCATCAGAAGAACGAGCCAGAGGCCGGCGCCTCGTCCATAGCCCACTCGATTCGTCAGCACGCCCT
          GCGGCATGCGGGCACCGTGCTGCGCACCCATGCGGGACCCAACAGCGAATTCGAGGTGCTCGACGGCGAGGACATTCTGC
          CCAAGGATGTGTACAAGAGCGACAATGTGCTATCCAAGCTGGTGCGCAATACCGTCGATGGTATTTCAAAGAGCCTGGGC
          ATGGGCGGTGACCAGGCGCTAGACAGCAGCACCACCAGCAGCAGCACCACAACGACCACGCGAGCTCCGTTCACCACACC
          GAACTACCAATGGCACAGCACTACTATGGCCCGCAAGCTGAAGAAGTTTATCACCAGCGCCACCACCGCGGCCACAACGG
          CGGCGGGCAGCAGCAGCACCGCCAGCAGTACCACCACCATTTCACCGACCATCAGTAGCACCACCATTCCGTCGACCACC
          ATCAGTAGCACCACCATCTCATCGAGCACCACTTTCAGTCCATTTAGCCCCTCCACCACCACCACCACCACCACCACCGC
          TGCCGCCCTGAATCTCGAGACCAGCGGCAGTGAATCGCCCTTCGGCGGCCTGCAGCGCATCCTCTCTAGCGCTGCGCCGC
          CGAGCCTGGCGCCAGTCGATGGGTTCGGTTCCGCTTCCGCTGCCACGCCCACATCCGGTTCCGGCGCCGGCTCATTTGTA
          GACTCCTTCCTGGCCAGCACACTAAGCCCGGCCAGCAGCACCGAGGGCTCGGCCAGCATTATGAACAACCTTTTCGGCCA
          GGGACCCATGGAGAATAGCTTCCAGACATACACCGATCTGGGCCACGAGGAGGCCACCGGTCTGGTGAGCTTCGAGAATC
          TAGAGAGTCTGGACAACATATACCCGGCGGCGCTGTCCTCCAATATCGGCACACTCAACTCCACCGCCTGCGGACGCATC
          GACATAATGGGCACCATTGTCTACGATTCGGCGCCCTACCTCTATCCGTTCATCATCGAGTATTCGCTGATCGGGGCGGT
          GGTGTTGTATGTCATGTGGAAGCACATCGGCCGCTATCCGGGCCGGATGAACGACGAGGATTTGGAGCATCGGCTGGAGG
          TGATGTTATCGCGGCGGGCGGTTGCCATGGCGCAGCAGGCGCGATCCGGACGCGTCGACTGCGTCGGCTCGTCGAAGGGC
          CTGTTCTTCGGGCTCCTGCTGCTGGTCGGGGCCCTCATCTGCCTGATACTCTTCTTCGTCTTGGTGCGCCATCAGCAGTT
          CTCGCTGTTGGCCATTTACCTCGCCGACGCCAGCCACTGCATCCTGATGGCGTTCGCCATTCTGGCCATTATTGTGGGAT
          TCATCAGGGTCAAAAACCTGAAGTTCCGCTGCGAGGAGCAGTCCAATCTGAACGACATCTTGCTGCGCATCTCGGCCTTC
          GGCCTGTTCACCTACTCCGTGTTCAGCATTATCGCCGGTAGCCTGAAGGTCCTGGAGAGCGAGCCCAGCCTGCTGGTCAC
          GACCACCGGTGGTGTGGCCGTCTTCCAGGTGATCCTGCAGCTGCTGTTCATCGCGGACGTGTCCCGCCGTCGCGTCCACC
          TGCCGGAGCACGACCGGAGCAAGCCGGGCCGCCAGATCGTCACGTTCCTTCTCATCTGCAACGTGGCCATGTTCGCCATC
          TACACATTCGAAGCTCAAAAAGTATTCGCCAATCCTGTAAGTAGATATGTTCAGCTGGAGTTCTACGGCTTCGTGCCCTG
          GTCGATCATCCAGCGCATCACACTGCCGCTGTGCATCTTCCATCGATTCCACAGCGCCGTGACACTCGCCGAGATCTGGA
          AGACCACCTACAAGGCACGTCTGGAGTAAGGCGATGCCTGGATCCCGATGTCTATATAGGCCGATGATGGGTGGGAGTTA
          TGAAAATGCACCAAAACCAAAATGTAGCGAGCCGAGAACGCGAACGGAAATCAAGTGAAGAGTTAGGTTCTAATTACGTA
          CTAAACATATATGCATACTACATATAATATATACATTAGTGCAGATATGTACGAGAGCATATTATGACGTTTTTTTTTTT
          GTTTGAGGAAACCAAAGCGAAACGAAATGAGTAACGAAACGAACGAAACAATCGGACCAATCTGCGCGATTAACAATTAA
          CGATTGCCAACCGATAACGATTGCAGGTCGCTTGTTCATTTCCCCCCACCACAAAAACACTTTCCTTTTTTACTTTGTTA
          ACTCGTGGAGAACTTAAGAACCTTAAGATCTAAGTCATAGCGTTTACAGTTTAACGAAAAACTTAGAACCAAGAACCACG
          GCACATGTTTTTAATCTGATTTACGTATTTAATTTAGTTTTAGTTTAGTTTCGCCTCTAACACGCTGCAATATCTTGTTA
          CTAAATCGAAACTACAAGTTAATATTAATTTCATAATTGTTTAACCATTATCCGCTTCGGCAACCGAAACCAAAACGAAA
          TCGATTAAAAAAATTCACATTACAAATAAGATGGAAAATATTCTGAAAACACAAAACAAATGGTTGTTTACTTTTCGCGT
          GTTTTTCGCGACTGCGAATGAGGGGAAATCCCCGTGACTATACACTGAAACACAAAACAGGGACACACAATGATGCAATG
          CCATGAAGAACGCGGCCACAGGAAACGGAAATGAAACGAAACGGTAACACAGCCCGGAAACGGAAACGAAATTCGATCTG
          ATCTGACTTTTCCACCAATCGAGAACAACAACAACAAGAACAACAGTAACAGCCGAACAACAACAAACTGTGATGAATTC
          ATATGATTTACTGGTATAATTTGCAATTCGATTACATTTCTGTTCCCGACTTGATTTAAGCCTTTAAGCCCTTTCGTTTT
          TTTATTCTCAGCCACAAGTCACTAACTGAGTCGACAAAACTTTTGTAAGAATTTAGAAACAATGGCGCTAAGACAACTTC
          ATGGCCAATTGTAAAAACAAATTGCCCGAAACACCATTACTAAAAACAAAATAATACAAAAAAAAAAACCCAAAGAAAAC
          AAAGAAAATTGTGGCATTTAATGGCCAGAAATACAAAAAACCACAAAATAAAAAAAAAAAACATTTTTAATATACATTAT
          ATAAAAGTTTATAAATGTCCATTTTTTGATTATTAGTAGTGATGTTAAAAGAAAAAACATAATTAACGGTAAAAATAATA
          ATATGTATGTATGTTATAGCAGAGAATCGGATAAACCAAACCAAACACAAATTCTTAAGCAACACTCGAATGAAAAAATG
          AGAAATTGCGAAGCAAACGAATAACTTTCCAAGTGAAATCCCCGCATTTATGAATGAAAATGAATTTTTAGCTAAAGCGA
          TATGGAAAACAAAATGGGAGTCATTCTGCCGATGATGATGACAGGTAAAACGGATAGGTACGGAGAAACCATTGACAAGC
          ATCAAATTGTTTACAATTTACAATGTTAAAAGAAACGAACATTTTGAAAGATATATATGCCACGTATATCTATAAATATA
          TGTATACTAACCCACCAAATTCAAAGTATTTCAACGTTTTATACAAGGAGACGATGCGCAAGACAAGAGATCGGGACAGC
          TAACCCCCTGTCCTGACCCCTGACCACTGACCCCTTTGAAATCCAAATACCCAGAGAATCCCTCCATCTCTCTCTCTCTC
          TATGAAACCATTCTACACCCATTCACACTCATCCACATTCCCATTCCCATACCCATATCAATTCCCATTCGAAATACAGC
          TGCAACTCGAGTCAGAAGGCATCAGTTTGCTAAAAGACCAAAGAAGATAAACGAAACGATTAATTGAGAATCCGATTATA
          ATCTGTAATCATAATCCAGTCTGCAAGTCTATATAATGCATGTTAACTGTAGGCGCGGGGAGTTCAACAAGAATACGTAT
          TCAATACTCGTAATCCAATCAAATGTAATGTGGTAGCAAGCTAGGTAAACCAAGCCAAAAAATCGAACAAACCATAAGTA
          GTTCAGCACACGCTCAGTCACCCAAGCGGATCTGGATCTGGATCTGGATCTGAATCTGAATCTCTGATCTGAATCGTAGG
          ATCCGTATCGGGGGAATCATATATCCAAAGTTTGCGAATCAAATTCAGTTTGAAACTTGTACTTGCGTAGGCTCTTAGAA
          ATTGTACTTGAATGCATACGCTACATAAATCACAGACATATATATTTAACTATGCGTATATATATAAATATTTATTTATT
          TATATATATATATATATACATATAATGCAAATAAATTCAATTGTTTTTTCCTTAACATTTAGTTAAACGTAAGATCAAAT
          CATATTTTATGCCGTACAACCGAACAGAAAAGTGAGCAGAAAGAAATATTTATTAAATGTTTCAACTAAGTTGTATAATT
          ATAAGTGAGAGTTTACATAATGGAATTATGTATCTGTATCTAAGCAAGAACAAAAAACACTGACAACATTTCGGGCGAGC
          GCGTCGATGAAAAACGAGTTGGGAATTCGAGTAACGTTAAAATATTCAGACAGAAACTTAACGCACAAGAACAAACAAGA
          TCAACACCAAAGCAGCAGCTAAATCCCATGAAATATACAAAACTTAAAGAACCGAAACAAAAAACATGAACAACTTATAT
          ACTCGTAAGTATATAGACAATTTCAATAACTGATAAATAAATATATATATATAAATATATATATATATATACAAAGTGAA
          AAGCAAAGGCAAAAAGCAAAATTTACATGCATTTCAAATACATTTCCCATAACCGCATCAACTAAACCAGAAATCAAGTA
          AAGTAACAATTACAAACGAATTAAAGTGGATAAAACGATTTCGCGATTCGACGAATGCGAATGAATATTATAAATTATAA
          ATTACAAATTATGAATGTGCGAACGCAAATGCTCAGCAACAAGAAACAAGAACAACAAATTCAAACAAAAAATTGTAAGC
          CATTTTTTAATCATTGTCGCATTTAAGAAACGATAACAAAAAAAAAAAAAAACGAATACAAAATTCAAGCGCGATTCATT
          TTGTTCAACAACACTCAACAAAAAATACTCATGCCAC
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0300466
          4210
          FBtr0300465
          4253
          FBtr0310285
          5914
          FBtr0336689
          4355
          FBtr0336690
          4154
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0301969
          979
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0289693
          916
          FBpp0289692
          991
          FBpp0301968
          977
          FBpp0307670
          917
          FBpp0307671
          958
          Comments

          Extended 3' UTR based on EST and RNA-Seq data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG42492-RE
          OtopLa-RE
          Secondary FlyBase IDs
            References (0)