macromolecule metabolic process
 |__protein metabolic process___
 |__macromolecule modification__|
primary metabolic process       |
 |__protein metabolic process___|
                                protein modification process  493 rec.
                                 |__actin modification 2 rec.
                                 |   |__actin ubiquitination
                                 |__metal incorporation into metallo-molybdopterin complex
                                 |   |__molybdenum incorporation into molybdenum-molybdopterin complex
                                 |   |__tungsten incorporation into tungsten-molybdopterin complex
                                 |__metal incorporation into metallo-sulfur cluster
                                 |   |__copper incorporation into metallo-sulfur cluster(+)
                                 |   |__iron incorporation into metallo-sulfur cluster
                                 |   |__molybdenum incorporation into metallo-sulfur cluster(+)
                                 |   |__nickel incorporation into metallo-sulfur cluster(+)
                                 |__N-terminal protein amino acid modification 12 rec.
                                 |   |__N-terminal protein amino acid acetylation(+) 11 rec.
                                 |   |__N-terminal protein amino acid carbamoylation
                                 |   |__N-terminal protein amino acid carboxylation
                                 |   |__N-terminal protein amino acid deamination(+)
                                 |   |__N-terminal protein amino acid methylation(+)
                                 |   |__N-terminal protein formylation
                                 |   |__N-terminal protein lipidation(+) 1 rec.
                                 |__nucleic acid-protein covalent cross-linking
                                 |   |__RNA-protein covalent cross-linking(+)
                                 |__peptide cross-linking 1 rec.
                                 |   |__isopeptide cross-linking(+)
                                 |   |__peptide cross-linking via L-cystine
                                 |__peptidyl-amino acid modification 62 rec.
                                 |   |__peptidyl-alanine modification(+)
                                 |   |__peptidyl-arginine modification(+) 3 rec.
                                 |   |__peptidyl-aspartic acid modification(+) 1 rec.
                                 |   |__peptidyl-cysteine modification(+) 1 rec.
                                 |   |__peptidyl-glutamic acid modification(+) 6 rec.
                                 |   |__peptidyl-glutamine modification(+) 1 rec.
                                 |   |__peptidyl-glycine modification(+)
                                 |   |__peptidyl-histidine modification(+) 9 rec.
                                 |   |__peptidyl-isoleucine modification
                                 |   |__peptidyl-L-amino acid racemization(+)
                                 |   |__peptidyl-leucine modification
                                 |   |__peptidyl-lysine modification(+) 32 rec.
                                 |   |__peptidyl-methionine modification(+) 2 rec.
                                 |   |__peptidyl-phenylalanine modification(+)
                                 |   |__peptidyl-proline modification(+) 5 rec.
                                 |   |__peptidyl-selenocysteine modification
                                 |   |__peptidyl-serine modification(+) 3 rec.
                                 |   |__peptidyl-threonine modification(+)
                                 |   |__peptidyl-tryptophan modification
                                 |   |__peptidyl-tyrosine modification(+)
                                 |   |__peptidyl-valine modification
                                 |__post-translational protein modification 350 rec.
                                 |   |__C-terminal protein amino acid modification(+)
                                 |   |__N-terminal protein amino acid propionylation
                                 |   |__post-translational protein acetylation
                                 |   |__protein auto-ADP-ribosylation
                                 |   |__protein modification by small protein conjugation or removal(+) 334 rec.
                                 |   |__protein poly-ADP-ribosylation
                                 |   |__regulation of post-translational protein modification(+) 29 rec.
                                 |__protein acylation 13 rec.
                                 |   |__peptidyl-lysine butyrylation
                                 |   |__peptidyl-lysine crotonylation(+)
                                 |   |__peptidyl-lysine glutarylation
                                 |   |__peptidyl-lysine propionylation
                                 |   |__protein acetylation(+) 12 rec.
                                 |   |__protein decanoylation
                                 |   |__protein formylation(+)
                                 |   |__protein malonylation
                                 |   |__protein myristoylation(+)
                                 |   |__protein octanoylation(+)
                                 |   |__protein palmitoleylation
                                 |   |__protein palmitoylation(+) 1 rec.
                                 |   |__protein succinylation
                                 |__protein alkylation 9 rec.
                                 |   |__protein methylation(+) 9 rec.
                                 |__protein arginylation
                                 |__protein carbamoylation
                                 |__protein carboxylation
                                 |   |__peptidyl-glutamic acid carboxylation
                                 |__protein de-ADP-ribosylation
                                 |   |__peptidyl-glutamate ADP-deribosylation
                                 |   |__peptidyl-serine ADP-deribosylation
                                 |__protein deacylation 1 rec.
                                 |   |__protein deacetylation(+)
                                 |   |__protein deglutarylation
                                 |   |__protein demalonylation(+)
                                 |   |__protein depalmitoleylation 1 rec.
                                 |   |__protein depalmitoylation
                                 |   |__protein depropionylation
                                 |   |__protein desuccinylation(+)
                                 |__protein dealkylation
                                 |   |__protein demethylation(+)
                                 |__protein deamination
                                 |   |__N-terminal protein amino acid deamination, from amino carbon
                                 |__protein deglutathionylation
                                 |__protein deglycation
                                 |   |__peptidyl-arginine deglycation
                                 |   |__peptidyl-cysteine deglycation
                                 |   |__peptidyl-lysine deglycation
                                 |   |__protein deglycation, glyoxal removal
                                 |   |__protein deglycation, methylglyoxal removal
                                 |__protein deglycosylation 3 rec.
                                 |   |__protein deglycosylation involved in glycoprotein catabolic process(+)
                                 |   |__protein demannosylation(+) 2 rec.
                                 |__protein dehydration
                                 |   |__peptidyl-tyrosine dehydrogenation
                                 |__protein delipidation
                                 |__protein denucleotidylation 1 rec.
                                 |   |__protein deadenylylation 1 rec.
                                 |__protein dephosphorylation 23 rec.
                                 |   |__peptidyl-histidine dephosphorylation
                                 |   |__peptidyl-N-phospho-arginine dephosphorylation 1 rec.
                                 |   |__peptidyl-serine dephosphorylation
                                 |   |__peptidyl-threonine dephosphorylation
                                 |   |__peptidyl-tyrosine dephosphorylation(+)
                                 |   |__regulation of translational initiation by eIF2 alpha dephosphorylation(+)
                                 |__protein flavinylation
                                 |__protein glutathionylation
                                 |   |__regulation of protein glutathionylation(+)
                                 |__protein hydroxylation 3 rec.
                                 |   |__peptidyl-aspartic acid hydroxylation
                                 |   |__peptidyl-lysine hydroxylation(+) 1 rec.
                                 |   |__peptidyl-proline hydroxylation(+)
                                 |   |__peptidyl-tyrosine hydroxylation
                                 |__protein lipidation 1 rec.
                                 |   |__C-terminal protein lipidation(+)
                                 |   |__N-terminal protein lipidation(+) 1 rec.
                                 |   |__protein decanoylation
                                 |   |__protein myristoylation(+)
                                 |   |__protein octanoylation(+)
                                 |   |__protein palmitoleylation
                                 |   |__protein palmitoylation(+) 1 rec.
                                 |   |__protein stearoylation
                                 |   |__regulation of protein lipidation(+)
                                 |__protein nitrosylation
                                 |   |__peptidyl-cysteine S-nitrosylation(+)
                                 |__protein nucleotidylation 1 rec.
                                 |   |__protein adenylylation(+) 1 rec.
                                 |   |__protein guanylylation
                                 |   |__protein uridylylation(+)
                                 |__protein oxidation
                                 |   |__peptidyl-cysteine oxidation
                                 |   |__peptidyl-lysine oxidation
                                 |   |__regulation of protein oxidation(+)
                                 |__protein phosphopantetheinylation
                                 |   |__peptidyl-serine phosphopantetheinylation
                                 |__protein phosphorylation 65 rec.
                                 |   |__I-kappaB phosphorylation(+)
                                 |   |__inhibitory G protein-coupled receptor phosphorylation(+)
                                 |   |__JUN phosphorylation
                                 |   |__peptidyl-arginine phosphorylation
                                 |   |__peptidyl-aspartic acid phosphorylation(+)
                                 |   |__peptidyl-histidine phosphorylation
                                 |   |__peptidyl-serine phosphorylation(+) 3 rec.
                                 |   |__peptidyl-threonine phosphorylation(+)
                                 |   |__peptidyl-tyrosine phosphorylation(+)
                                 |   |__protein autophosphorylation(+) 7 rec.
                                 |   |__regulation of protein phosphorylation(+) 12 rec.
                                 |   |__regulation of translational initiation by eIF2 alpha phosphorylation(+)
                                 |__protein polyamination
                                 |__protein prenylation
                                 |   |__protein farnesylation
                                 |   |__protein geranylgeranylation(+)
                                 |__protein sialylation
                                 |__protein sulfation
                                 |   |__peptidyl-tyrosine sulfation
                                 |__protein sulfhydration
                                 |   |__peptidyl-cystine sulfhydration
                                 |__protein-coenzyme A linkage
                                 |   |__protein-phosphoribosyl dephospho-coenzyme A linkage
                                 |__protein-FAD linkage 2 rec.
                                 |__protein-pyridoxal-5-phosphate linkage
                                 |   |__protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine
                                 |   |__regulation of protein-pyridoxal-5-phosphate linkage(+)
                                 |__regulation of protein modification process 42 rec.
                                     |__negative regulation of protein modification process(+) 8 rec.
                                     |__positive regulation of protein modification process(+) 24 rec.
                                     |__regulation of peptidyl-cysteine S-nitrosylation(+)
                                     |__regulation of peptidyl-lysine crotonylation(+)
                                     |__regulation of post-translational protein modification(+) 29 rec.
                                     |__regulation of protein acetylation(+)
                                     |__regulation of protein adenylylation(+)
                                     |__regulation of protein deacetylation(+)
                                     |__regulation of protein geranylgeranylation(+)
                                     |__regulation of protein glutathionylation(+)
                                     |__regulation of protein lipidation(+)
                                     |__regulation of protein oxidation(+)
                                     |__regulation of protein phosphorylation(+) 12 rec.
                                     |__regulation of protein polyglycylation(+) 1 rec.
                                     |__regulation of protein-pyridoxal-5-phosphate linkage(+)