General Information
Term	primary_transcript_region	ID (Ontology)	SO:0000835 (Sequence Ontology)
Definition	A part of a primary transcript.
Also Known As	"primary transcript region"
Comment
Links to External Ontologies
	SO.org
Annotations
Records annotated with this term OR any of its CHILD TERMS
Results list data from multiple species. Click on a button above and use the 'Filter by species' options on the resulting HitList to retrieve species-specific data.
Records annotated with this exact term (annotations to child terms are NOT included)
No relevant records available
Full annotation statements including this term (annotations to child terms are NOT included), and relevant FlyBase records
No relevant statements available

General Information

Term

primary_transcript_region

ID (Ontology)

SO:0000835 (Sequence Ontology)

Definition

A part of a primary transcript.

Also Known As

"primary transcript region"

Comment

Links to External Ontologies

SO.org

Annotations

Records annotated with this term OR any of its CHILD TERMS

Full annotation statements including this term (annotations to child terms are NOT included), and relevant FlyBase records

No relevant statements available

transcript
 |__primary_transcript__
 |__transcript_region___|
biological_region       |
 |__transcript_region___|
                        primary_transcript_region  51624 rec.
                         |__clip
                         |   |__five_prime_clip
                         |   |__three_prime_clip
                         |__intron
                         |   |__autocatalytically_spliced_intron(+)
                         |   |__endonuclease_spliced_intron(+)
                         |   |__five_prime_intron
                         |   |__interior_intron
                         |   |__intron_domain
                         |   |__intronic_regulatory_region
                         |   |__intronic_splicing_silencer
                         |   |__lariat_intron
                         |   |__mobile_intron
                         |   |__spliceosomal_intron(+)
                         |   |__three_prime_intron
                         |   |__twintron
                         |   |__UTR_intron(+)
                         |__intron_domain
                         |   |__extended_intronic_splice_region
                         |   |__internal_guide_sequence
                         |   |__intron_base_5
                         |   |__miRtron
                         |__miRNA_primary_transcript_region 262 rec.
                         |   |__miRNA_antiguide
                         |   |__miRNA_loop
                         |   |__miRNA_stem
                         |   |__pre_miRNA(+) 262 rec.
                         |__outron
                         |__rRNA_primary_transcript_region
                         |   |__transcribed_spacer_region(+)
                         |__splice_region
                         |__splice_site
                         |   |__cis_splice_site(+)
                         |   |__cryptic_splice_site
                         |   |__trans_splice_site(+)
                         |__spliced_leader_RNA
                         |__spliceosomal_intron_region
                         |   |__branch_site
                         |   |__intronic_splice_enhancer
                         |   |__polypyrimidine_tract
                         |__transcription_end_site
                         |__TSS 51362 rec.
                             |__major_TSS
                             |__minor_TSS

Spanning Tree View Settings
Parents/Children View Depth	Show hierarchy levels: for parents, for children
Relationships
Is a	transcript_region
Part of	primary_transcript
Synonyms & Secondary IDs
Synonyms
	"primary transcript region" EXACT
Secondary IDs

External Crossreferences & Linkouts

Spanning Tree View Settings

Parents/Children
View Depth

Relationships

Is a

transcript_region

Part of

primary_transcript

Synonyms & Secondary IDs

Synonyms

"primary transcript region" EXACT

Secondary IDs

External Crossreferences & Linkouts