FB2025_05 , released December 11, 2025
FB2025_05 , released December 11, 2025
CV Term Report
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General Information
Term biological_region ID (Ontology) SO:0001411 (Sequence Ontology)
Definition A region defined by its disposition to be involved in a biological process.
Also Known As "biological region" ; "INSDC_note:biological_region"
Comment
Links to External Ontologies
SO.org
Annotations
Records annotated with this term OR any of its CHILD TERMS
Records annotated with this exact term (annotations to child terms are NOT included)
No relevant records available
show Full annotation statements including this term (annotations to child terms are NOT included), and relevant FlyBase records
No relevant statements available
Spanning Tree (Parents/Children)
Only view relationship:
  sequence_feature
   |__region
       |__biological_region  1034678 rec.
           |__accessible_DNA_region
           |   |__nuclease_hypersensitive_site(+)
           |__amino_acid
           |   |__alanine
           |   |__arginine
           |   |__asparagine
           |   |__aspartic_acid
           |   |__catalytic_residue
           |   |__cysteine
           |   |__glutamic_acid
           |   |__glutamine
           |   |__glycine
           |   |__histidine
           |   |__isoleucine
           |   |__leucine
           |   |__lysine
           |   |__methionine
           |   |__modified_amino_acid_feature(+)
           |   |__phenylalanine
           |   |__proline
           |   |__pyrrolysine
           |   |__selenocysteine
           |   |__serine
           |   |__threonine
           |   |__tryptophan
           |   |__tyrosine
           |   |__valine
           |__base 2004 rec.
           |   |__modified_DNA_base(+)
           |   |__modified_RNA_base_feature(+) 2004 rec.
           |__binding_site 242272 rec.
           |   |__epitope
           |   |__homologous_chromosome_recognition_and_pairing_locus
           |   |__ligand_binding_site(+)
           |   |__metal_binding_site(+)
           |   |__nucleotide_binding_site(+)
           |   |__protein_binding_site(+) 242272 rec.
           |__biosynthetic_gene_cluster
           |__cap
           |__chromosome_part 273 rec.
           |   |__chromatin_regulatory_region
           |   |__chromosomal_regulatory_element(+)
           |   |__chromosomal_structural_element(+)
           |   |__chromosome_arm
           |   |__chromosome_band
           |   |__Crick_strand
           |   |__DNA_loop
           |   |__interband
           |   |__introgressed_chromosome_region 273 rec.
           |   |__Watson_strand
           |__CpG_island
           |__D_loop
           |   |__mitochondrial_D_loop
           |__deletion 11222 rec.
           |   |__mobile_element_deletion(+)
           |__gene 82800 rec.
           |   |__candidate_gene(+)
           |   |__cryptic_gene(+)
           |   |__engineered_gene(+) 5815 rec.
           |   |__epigenetically_modified_gene(+)
           |   |__foreign_gene(+) 5375 rec.
           |   |__fusion_gene(+) 461 rec.
           |   |__gene_cassette
           |   |__gene_with_non_canonical_start_codon(+) 33 rec.
           |   |__gene_with_polycistronic_transcript(+) 445 rec.
           |   |__gene_with_trans_spliced_transcript 26 rec.
           |   |__mt_gene(+) 39 rec.
           |   |__ncRNA_gene(+) 3633 rec.
           |   |__negatively_autoregulated_gene
           |   |__nuclear_gene 18012 rec.
           |   |__nucleomorph_gene
           |   |__plasmid_gene
           |   |__plastid_gene(+)
           |   |__positively_autoregulated_gene
           |   |__post_translationally_regulated_gene
           |   |__predicted_gene
           |   |__protein_coding_gene(+) 14371 rec.
           |   |__proviral_gene(+)
           |   |__recombinationally_rearranged_gene(+)
           |   |__rescue_gene(+)
           |   |__retrogene 142 rec.
           |   |__silenced_gene(+)
           |   |__transgene(+)
           |   |__translationally_regulated_gene
           |   |__transposable_element_gene(+) 332 rec.
           |   |__vertebrate_immune_system_gene(+)
           |__gene_component_region 51362 rec.
           |   |__gene_fragment
           |   |__gene_segment(+)
           |   |__intein_encoding_region
           |   |__non_transcribed_region
           |   |__promoter(+) 51362 rec.
           |__gene_group 24 rec.
           |   |__gene_array 20 rec.
           |   |__gene_cassette_array(+)
           |   |__gene_subarray
           |   |__mating_type_region
           |   |__operon(+)
           |   |__regulon(+)
           |__gene_member_region 571773 rec.
           |   |__functional_gene_region
           |   |__regulatory_region(+) 358304 rec.
           |   |__transcript(+) 264831 rec.
           |__genetic_marker
           |   |__DArT_marker
           |   |__heritable_phenotypic_marker
           |   |__selection_marker
           |__insertion 766 rec.
           |   |__duplication(+) 429 rec.
           |   |__mobile_element_insertion(+)
           |   |__novel_sequence_insertion
           |   |__transgenic_insertion
           |__intergenic_region
           |__inversion
           |__linkage_group
           |__mobile_genetic_element 178140 rec.
           |   |__extrachromosomal_mobile_genetic_element(+) 1482 rec.
           |   |__integrated_mobile_genetic_element(+) 178140 rec.
           |   |__mobile_intron
           |__mutational_hotspot
           |__Okazaki_fragment
           |__oligo_U_tail
           |__open_chromatin_region
           |__origin_of_replication 8073 rec.
           |   |__amplification_origin
           |   |__ARS
           |   |__early_origin_of_replication
           |   |__late_origin_of_replication
           |   |__mitochondrial_control_region(+)
           |   |__oriC
           |   |__oriT
           |   |__oriV
           |   |__replication_start_site
           |   |__telomeric_D_loop
           |__polyA_sequence
           |__polyA_site_cluster
           |__polypeptide 219543 rec.
           |__polypeptide_region 188713 rec.
           |   |__2A_self_cleaving_peptide_region
           |   |__cleaved_peptide_region(+)
           |   |__compositionally_biased_region_of_peptide
           |   |__hydrophobic_region_of_peptide
           |   |__immature_peptide_region 6 rec.
           |   |__immunoglobulin_region(+)
           |   |__mature_protein_region(+) 6 rec.
           |   |__peptide_localization_signal(+)
           |   |__polypeptide_conserved_region(+)
           |   |__polypeptide_structural_region(+)
           |   |__polypeptide_variation_site(+)
           |   |__protease_site
           |   |__protein_stability_element
           |__pseudogene 728 rec.
           |   |__non_processed_pseudogene(+)
           |   |__polymorphic_pseudogene(+)
           |   |__processed_pseudogene(+) 8 rec.
           |   |__transposable_element_pseudogene
           |   |__vertebrate_immune_system_pseudogene(+)
           |__pseudogenic_region
           |   |__decayed_exon
           |   |__pseudogenic_CDS
           |   |__pseudogenic_exon
           |   |__pseudogenic_transcript(+)
           |__QTL
           |__rearrangement_region
           |__recombination_feature
           |   |__haplotype_block
           |   |__iDNA
           |   |__meiotic_recombination_region
           |   |__mitotic_recombination_region
           |   |__recombination_hotspot(+)
           |   |__sequence_rearrangement_feature(+)
           |__repeat_region 32 rec.
           |   |__centromeric_repeat(+)
           |   |__direct_repeat(+)
           |   |__dispersed_repeat
           |   |__engineered_foreign_repetitive_element
           |   |__flanking_repeat
           |   |__inverted_repeat(+)
           |   |__knob
           |   |__long_terminal_repeat(+)
           |   |__nested_repeat(+)
           |   |__non_LTR_retrotransposon_polymeric_tract
           |   |__tandem_repeat(+) 2 rec.
           |   |__telomeric_repeat
           |   |__terminal_repeat
           |   |__X_element_combinatorial_repeat
           |   |__Y_prime_element
           |__repeat_unit
           |__replicon 11209 rec.
           |   |__chromosome(+) 330 rec.
           |   |__maxicircle
           |   |__minicircle
           |   |__plasmid(+) 2806 rec.
           |   |__vector_replicon(+) 6 rec.
           |   |__viral_sequence(+)
           |__restriction_enzyme_region
           |   |__restriction_enzyme_assembly_scar
           |   |__restriction_enzyme_recognition_site(+)
           |   |__restriction_enzyme_single_strand_overhang(+)
           |__retron
           |__sequence_motif 51362 rec.
           |   |__nucleotide_motif(+) 51362 rec.
           |__sequence_secondary_structure
           |   |__base_pair(+)
           |   |__DNA_sequence_secondary_structure(+)
           |   |__G_quartet
           |   |__pseudoknot(+)
           |   |__RNA_sequence_secondary_structure(+)
           |__substitution 7201 rec.
           |   |__complex_substitution 95 rec.
           |   |__MNV(+) 315 rec.
           |   |__SNV(+) 6814 rec.
           |__transcript_region 158337 rec.
           |   |__anchor_binding_site
           |   |__edited_transcript_feature(+)
           |   |__exon(+)
           |   |__exon_region(+)
           |   |__mature_transcript_region(+) 106713 rec.
           |   |__primary_transcript_region(+) 51624 rec.
           |   |__ribonuclease_site
           |__unit_of_gene_expression
               |__transcription_unit
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Synonyms
  • "biological region" EXACT
    "INSDC_misc_feature" BROAD
    "INSDC_note:biological_region" EXACT
Secondary IDs
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