Cytology	Observed or estimated sequence coordinates	Symbol	Stocks


*Genes (mapped to the sequence)* [Export into hitlist]
58E2-58E3	2R:22454741..22472995	CG10384	22 stocks
58E3-58E3	2R:22472995..22476314	CG45062	2 stocks
58E3-58E3	2R:22476385..22477295	CG45063	FBst1073649
58E3-58E3	2R:22478379..22483054	CG4752	10 stocks
58E3-58E3	2R:22483303..22492033	CG4554	7 stocks
58E3-58E4	2R:22492197..22494295	CG4610	4 stocks
58E4-58E8,58E1-58E2,58E1-58E2,58E1-58E2	2R:22494297..22562065	px	80 stocks

*Genes (mapped, but not to the sequence)* [Export into hitlist]
41-60	2R:4460915..25255318	l(2)cl-R11	3 stocks
50C-59B	2R:13663924..22978008	l(2)4-3A
57E4-59A4	2R:21461678..22766694	Su(var)57D58D
58A-58F	2R:21758516..22675646	l(2)Su(H)	3 stocks
58E1-58F3	2R:22417521..22648591	ned
58E-58E	2R:22417521..22584651	qkr58E-5
58E-58E	2R:22417521..22584651	qkr58E-4
58E-58E	2R:22417521..22584651	qkr58E-6
58E-58E	2R:22417521..22584651	l(2)ry50
58E-58E	2R:22417521..22584651	qkr58E-7
58E3-59E1	2R:22471832..23484007	patulous
58E3-59A1	2R:22471832..22685815	crs	2 stocks
58E3-58E10	2R:22471832..22584651	M(2)58F	5 stocks
58E3-58E5	2R:22471832..22520724	l(2)k08320	FBst0314281

*Insertions (cytology mapped)* [Export into hitlist]
41--60	2R:4460915..25255318	P{Rac1[+t3.6]}1.7.2	FBst0006683
58D--58E	2R:22193487..22584651	P{w[en.5]}7C
58E--58F	2R:22417521..22675646	P{w[en.1]}29
58E-58F	2R:22417521..22675646	P{R3.9}5
58E4-58E8	2R:22492486..22562981	P{GT1}px[BG02217]
58E4-58E8	2R:22492486..22562981	P{T1}px[T190-202]
58E4--58E8	2R:22492486..22562981	P{Mae-UAS.6.11}B0377[B0377]
58E4-58E4	2R:22492486..22513140	P{GSV1}EP-575[EP-575]

*Insertions (sequence mapped)* [Export into hitlist]
58E3	2R:22477996..22477996	Mi{MIC}MI06701
58E3	2R:22478365..22478365	P{XP}CG4752[d07156]	FBst0019265
58E3_r6	2R:22478920..22478920	Mi{Trojan-GAL4.1}CG4752[MI13500-TG4.1]	FBst0076751
58E3	2R:22478920..22478920	Mi{MIC}CG4752[MI13500]	FBst0059150
58E3	2R:22484756..22484756	PBac{PB}CG4554[c02084]	FBst0010817
58E4-58E5	2R:22512172..22513502	P{lArB}px[A130.1F2]

*Deleted segments (sequence mapped)* [Export into hitlist]
58A2--58F1	2R:21806350..22592996	Df(2R)BSC597	FBst0025430
58B10--58E5	2R:22127471..22514145	Df(2R)ED3952	2 stocks
58C7-58F1	2R:22193160..22591342	Df(2R)01D01W-L149	FBst0006854
58C7-58E5	2R:22193160..22513474	Df(2R)01D01W-L053	FBst0006853
58D1--59A1	2R:22193486..22692524	Df(2R)X58-12	3 stocks
58D4--58E5	2R:22380451..22514138	Df(2R)Exel7173	FBst0007903

*Duplicated segments (sequence mapped)* [Export into hitlist]
58D4-58E3	2R:22397446..22479445	Dp(2;3)GV-CH321-21H07	FBst0089736
58E2-58E7	2R:22456768..22543588	Dp(2;3)GV-CH321-05C14	FBst0090276

*Deleted segments (cytology mapped)* [Export into hitlist]
57F--58F	2R:21549018..22675646	Df(2R)XE-916
57F11--59A1	2R:21721528..22685815	Df(2R)M58F
58A1--58F	2R:21758516..22675646	Df(2R)X58-9
58A3--58E4	2R:21844904..22513140	Df(2R)X58-6
58B1--58E4	2R:21978059..22513140	Df(2R)X58-7	2 stocks
58B1--58E4	2R:21978059..22513140	Df(2R)X58-11
58B3--59A1	2R:22073114..22685815	Df(2R)X58-8	3 stocks
58B3--58F8	2R:22073114..22675646	Df(2R)X58-5
58C3--58E	2R:22154774..22584651	Df(2R)X58-4
58C7--58F5	2R:22184500..22668579	Df(2R)X58-2
58D6--58F5	2R:22407634..22668579	Df(2R)X58-1

*Duplicated segments (cytology mapped)* [Export into hitlist]
41A1--60D	2R:4460915..24747488	Dp(2;Y)cb25-11
42A--60D	2R:5802900..24747488	Dp(2;Y)cb25-9
56C--59D	2R:19156661..23434601	Dp(2;2)M56F[+]2
56D1--59D3	2R:19329545..23250118	Dp(2;2)l-85
56F1--60B2	2R:19971054..24016380	Dp(2;2)l-25
56F1--58E	2R:19971054..22584651	Dp(2;2)l-23
56F5--60E	2R:20015078..25017640	Dp(2;2)M2
57B1--60E2	2R:20683850..24838472	Dp(2;2)l-6
57B--60D	2R:20683850..24747488	Dp(2;2)M8
57B1--60C8	2R:20683850..24449698	Dp(2;2)l-10
57E4--59A4	2R:21461678..22766694	Dp(2;2)l-32
58D1--58E	2R:22193487..22584651	Dp(2;2)l-14
58E1--59F2	2R:22417521..23580983	Dp(2;2)l-24
58E1--59D2	2R:22417521..23214520	Dp(2;2)l-17
58E1--58F	2R:22417521..22675646	Dp(2;2)l-11

*Inversion breakpoints (cytology mapped)* [Export into hitlist]
41-60A	2R:4460915..23989883	In(F2R)217
41-59F	2R:4460915..23787158	In(2R)41;59F
41-59D	2R:4460915..23434601	In(2R)bw[A]
41A-59D	2R:4460915..23434601	In(2R)bw[VI]
42A-60B	2R:5802900..24156611	In(2R)Mg109
42A-60A	2R:5802900..23989883	In(2R)PS19
42D-60F	2R:6776963..25255318	In(2R)PS20
43E-60B	2R:7571523..24156611	In(2R)Mg108
45D-58E	2R:9344687..22584651	In(2LR)A8158
45D-58E	2R:9344687..22584651	In(2LR)A81815
47E-58E	2R:11220955..22584651	In(2LR)A8164b
47F-60A	2R:11287019..23989883	In(2R)Z5
48A3-59C3	2R:11580032..23098521	In(2R)SD1[rv1]
49B-60B	2R:12530888..24156611	In(2R)St-B
49D4-60F1	2R:12825913..25044553	In(2R)vg[88e28]
49D4-60B12	2R:12825913..24144090	In(2R)vg[87g43]
49D4-59D	2R:12825913..23434601	In(2R)vg[83f38]
49D4-59D4	2R:12825913..23285389	In(2R)vg[78k3]
50A-60B	2R:13275887..24156611	In(2R)AWI4
51B-59B	2R:14547367..22978008	In(2R)IW7
51B-59A	2R:14547367..22766694	In(2R)JHI4
51D-59F	2R:14872153..23787158	In(2R)ZP7
51F-60D	2R:15265243..24747488	In(2R)PS25
52A-60A	2R:15402600..23989883	In(2R)Z6
52D12-60B2	2R:16001264..24016380	In(2R)88f5
52E-60A	2R:16042768..23989883	In(2R)Mg119
53-58	2R:16231535..22675646	In(2R)k05507
53D-59F	2R:16667221..23787158	In(2R)K15
53D-59A	2R:16667221..22766694	In(2R)ID
54B-60F	2R:17227748..25255318	In(2R)St-Q
54B-59C	2R:17227748..23139064	In(2R)PS26
54C-60D	2R:17507340..24747488	In(2R)Z7
54D-59D	2R:17601740..23434601	In(2R)H71
54D-59C	2R:17601740..23139064	In(2R)JHI7
54E-59D	2R:17701491..23434601	In(2R)JHI8
54F-59A	2R:17811909..22766694	In(2R)TE35B-3a
54F-59A	2R:17811909..22766694	In(2R)CA40
55E-60E	2R:18581569..25017640	In(2R)HNI
55E-59B	2R:18581569..22978008	In(2R)S20
55E-58E	2R:18581569..22584651	In(2R)II
55F-60F	2R:18750946..25255318	In(2R)SMG11
55F-60E	2R:18750946..25017640	In(2R)St-J
55F-60E	2R:18750946..25017640	In(2R)J
56D-59B	2R:19329545..22978008	In(2R)K1
56D-59B	2R:19329545..22978008	In(2R)PS27
56F-58F	2R:19971054..22675646	In(2R)IG
57B-59D	2R:20683850..23434601	In(2R)JHI10
57B-58E	2R:20683850..22584651	In(2LR)A81211
57C-59D	2R:21107331..23434601	In(2R)AWI5
57C-58E	2R:21107331..22584651	In(2R)Kd
57F-59D	2R:21549018..23434601	In(2R)JHI11
58A-60F3	2R:21758516..25093138	In(2R)Kr[UR1]
58E-59B	2R:22417521..22978008	In(2R)RBR7
[];[<58E4]-[];[<58E4]	2R:22492486..22513140	In(2LR)a[M60]

*Transposition and translocation breakpoints (cytology mapped)* [Export into hitlist]
41-100	2R:4460915..32068446	T(2;3)E(SD)1
41-98F	2R:4460915..29184631	T(2;3)L141-50
41A-98C	2R:4460915..28383802	T(2;3)Dem1-19
41-97D	2R:4460915..27054991	T(F2R;3)172
41-80	2R:4460915..23856407	T(2;3)L141-41
41A-94B	2R:4460915..22666854	T(2;3)Dem2-2
42A-96E	2R:5802900..25712016	T(2;3)C5
42F-100F	2R:7078092..32068446	T(2;3)CA15
43E15-98A12	2R:7756730..27635789	T(2;3)cn74c7
44F-99B	2R:8783087..29775722	T(2;3)Mg175
45C-98A	2R:9250251..27670954	T(2;3)14h
45F-94C	2R:9534678..22827295	T(2;3)A81115
48A3-96C	2R:11580032..25292351	T(2;3)en[LA3]
48A3-79F	2R:11580032..22718905	T(2;3)en[SF24]
49A-98B	2R:12345604..28082526	T(2;3)Hin111
49A-80A	2R:12345604..22843488	T(2;3)6r6
49D4-96C2	2R:12825913..25173390	T(2;3)vg88d9
49D4-80C2	2R:12825913..23005626	T(2;3)vg[88f31]
51A-80C	2R:14389492..23077120	T(2;3)L141-18
51F-94E	2R:15265243..23363938	T(2;3)Mg53
52A-98F1	2R:15402600..28891153	T(2;3)XP8
52B-99C	2R:15578986..29957664	T(2;3)cb25-17
52F-96B	2R:16150096..25101913	T(2;3)MP44
53A-100B9	2R:16231535..31275051	T(2;3)Su(bw[D])133
53-80	2R:16231535..23856407	T(2;3)pk[D1-rv6]
53C-96C	2R:16333900..25292351	T(2;3)ML225
53D-97B	2R:16667221..26558307	T(2;3)Mg174
54-98	2R:17132870..29184631	T(2;3)Y2
54C-95D	2R:17507340..24063100	T(2;3)H110
55B-100D	2R:18013903..31917440	T(2;3)Su(bw[D])5
55E10-98C3	2R:18723228..28326512	T(2;3)89e64c
55F-100D	2R:18750946..31917440	T(2;3)Su(bw[D])126
56-94	2R:18927716..23509789	T(2;3)SD-2
56F-97B	2R:19971054..26558307	T(2;3)JHT2
57-97	2R:20361758..27434247	T(2;3)Y3
57D-99B	2R:21199300..29775722	T(2;3)Mg191
57E-94E	2R:21378742..23363938	T(2;3)L141-21