Cytology	Observed or estimated sequence coordinates	Symbol	Stocks


*Genes (mapped to the sequence)* [Export into hitlist]
84E12-84E13,84E-84E,84E10-84E11,84F-84F,84E-84E,84F-84F,84F-84F,84F1-84F2,84E-84E,84E10-84E11	3R:8105332..8122294	puc	30 stocks
84E13-84E13	3R:8122725..8125273	CG7878	10 stocks
84E13-84E13	3R:8125290..8126357	CG9667	6 stocks
84E13-84E13	3R:8126605..8129835	Arl8	5 stocks

*Genes (mapped, but not to the sequence)* [Export into hitlist]
81-100	3R:3461351..32068446	cant	2 stocks
81-100	3R:3461351..32068446	l(3)cl-R3	2 stocks
84D-84E	3R:7174723..8130321	l(3)ry60
84D-84E	3R:7174723..8130321	e(Pc)84DE	FBst0004505
84E8-84F1	3R:7999376..8185945	l(3)84Eg	2 stocks
84E8-84F1	3R:7999376..8185945	l(3)84Ei

*Insertions (cytology mapped)* [Export into hitlist]
84-85	3R:6625559..10201762	P{W5}84
84-84	3R:6625559..8383247	P{3.8S-Y}34
84D-84E	3R:7174723..8130321	P{418}e(Pc)84DE[T66.1]	FBst0004505
84D-84E	3R:7174723..8130321	P{FRT(w[hs])}75A	2 stocks
84D-84E	3R:7174723..8130321	P{FRT(w[hs])}ZQa2
84E-84E	3R:7760099..8130321	P{HBΔ-194}84E
84E-84E	3R:7760099..8130321	P{lacW}l(3)S025240[S025240]
84E-84E	3R:7760099..8130321	P{Sgs1-lacZ.C-182}84E
84E-84E	3R:7760099..8130321	P{GMroX1}84E
84E-84E	3R:7760099..8130321	P{lacW}S096516a
84E-84E	3R:7760099..8130321	P{lacW}S119607c
84E9--84E13	3R:8028556..8130321	P{lacW}S040428a
84E10--84E13	3R:8040046..8130321	P{lacW}S027604a
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-S]
84E12-84E13	3R:8098406..8130321	TI{TI}puc[HA]
84E12-84E13	3R:8098406..8130321	P{A92}puc[E69]	2 stocks
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-A]
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-G]
84E12-84E13	3R:8098406..8130321	P{lArB}puc[A251.1F3]	FBst0011173
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-Q]
84E12-84E13	3R:8098406..8130321	P{GAL4E69}puc[GAL4E69]	FBst0006762
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-M]
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-H]
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-F]
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-I]
84E12-84E13	3R:8098406..8130321	P{lacZ}puc[B48]
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-K]
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-C]
84E12-84E13	3R:8098406..8130321	P{GawB}puc[E69-E]
84E12-84E13	3R:8098406..8130321	P{EP}puc[EP3194]
84E13-84E13	3R:8118832..8130321	TI{TI}Arl8[EGFP]
84E13-84E13	3R:8118832..8130321	P{GSV1}GS3044
84E13-84E13	3R:8118832..8130321	P{RS5r}5-HA-1839

*Insertions (sequence mapped)* [Export into hitlist]
84E13	3R:8119735..8119735	PBac{PB}puc[c04318]
84E13	3R:8119738..8119738	PBac{RB}puc[e01329]
84E13	3R:8119738..8119738	PBac{WH}puc[f04998]
84E13	3R:8119863..8119863	P{GSV6}puc[GS16811]	FBst0324040
84E13	3R:8119910..8119910	P{GSV6}GS11045	FBst0311037
84E13	3R:8120015..8120015	P{XP}puc[d11271]
84E13-84E13	3R:8120079..8120079	P{GawB}puc[NP1311]	FBst0302847
84E13	3R:8120124..8120128	P{XP}puc[d08940]
84E13	3R:8120141..8120141	P{GSV6}GS14090
84E13	3R:8121589..8121589	PBac{PB}puc[c03339]
84E13	3R:8121964..8121964	PBac{PB}puc[c06751]
84E13-84E13	3R:8122228..8122491	PBac{WH}f00611
84E13-84E13	3R:8122635..8122635	P{GawB}NP0157	FBst0302412
84E13	3R:8122723..8122723	P{EPgy2}CG7878[EY03806]	FBst0019835
84E12	3R:8122723..8122723	P{GT1}CG7878[BG00460]	FBst0012422
84E13	3R:8122730..8122730	P{GSV6}GS13337
84E13	3R:8122730..8122730	P{GSV1}wdb[GS3130]	FBst0322341
84E13	3R:8122735..8122735	P{RS5}CG7878[5-HA-1839]	FBst0327462
84E13	3R:8122735..8122735	P{GSV6}GS10338
84E13	3R:8122744..8122744	P{GSV7}GS21338	FBst0321391
84E13	3R:8126380..8126380	P{GSV6}GS17888	FBst0320690
84E13	3R:8127637..8127637	PBac{RB}Arl8[e00336]	FBst0017846

*Deleted segments (sequence mapped)* [Export into hitlist]
84D9--84F6	3R:7530674..8250421	Df(3R)BSC513	FBst0025017
84D14--84F5	3R:7750087..8244129	Df(3R)BSC729	FBst0026581
84E1--84F5	3R:7765497..8244129	Df(3R)BSC873	FBst0029996
84E6--84E13	3R:7967170..8120015	Df(3R)Exel6263	FBst0007730
84E6--85A5	3R:7977774..8653134	Df(3R)ED5230	3 stocks
84E8--84F6	3R:8012035..8250421	Df(3R)BSC222	FBst0009699

*Duplicated segments (sequence mapped)* [Export into hitlist]
84E10-84F1	3R:8068944..8156944	Dp(3;2)GV-CH321-48G13	FBst0090684
84E12-84F2	3R:8116918..8200270	Dp(3;2)GV-CH321-01I13	FBst0090271

*Deleted segments (cytology mapped)* [Export into hitlist]
84C8--84F6	3R:7162486..8281680	Df(3R)dsx29	FBst0324934
84D2--84F16	3R:7189302..8383247	Df(3R)D6	2 stocks
84D3--85B5	3R:7233763..8924290	Df(3R)dsx34
84D3--85A4	3R:7233763..8610003	Df(3R)D8	2 stocks
84D3--84F2	3R:7233763..8204008	Df(3R)dsx10M	2 stocks
84D4--85D4	3R:7331517..9257806	Df(3R)p46
84D4--85C1	3R:7331517..9003892	Df(3R)p66
84D5--84F2	3R:7336076..8204008	Df(3R)D7	2 stocks
84D6--85A6	3R:7398631..8703798	Df(3R)p4
84D6--85A3	3R:7398631..8584308	Df(3R)dsx1
84D8--85B5	3R:7467934..8924290	Df(3R)dsx37	2 stocks
84D8--85A2	3R:7467934..8527619	Df(3R)dsx11	2 stocks
84D9--85A3	3R:7488360..8584308	Df(3R)dsx27	2 stocks
84D10--85A3	3R:7552738..8584308	Df(3R)dsx33
84D10--85A2	3R:7552738..8527619	Df(3R)dsx8
84D11--85A3	3R:7617117..8584308	Df(3R)dsx10D	2 stocks
84D11--84F16	3R:7617117..8383247	Df(3R)dsx2D	2 stocks
84D11--84F2	3R:7617117..8204008	Df(3R)dsx3	FBst0305206
84D13--85A5	3R:7710493..8703788	Df(3R)dsx28
84E1--84F12	3R:7760099..8334748	Df(3R)dsx5	FBst0001883
84E6--85A5	3R:7949952..8703788	Df(3R)V2
84E8--85B6	3R:7999376..8930218	Df(3R)p40	FBst0305261
84E9--85A11	3R:8028556..8767344	Df(3R)V8
84E12--85A11	3R:8098406..8767344	Df(3R)CA1	2 stocks

*Duplicated segments (cytology mapped)* [Export into hitlist]
82A--85E	3R:4208470..9907978	Dp(3;3)Tpl-J25
82B--84F	3R:4410636..8383247	Dp(3;3)Tpl-J4
83B--85D	3R:5531603..9600373	Dp(3;3)D3
83C--95C	3R:5688967..23940806	Dp(3;3)M37
83C--86E	3R:5688967..11785612	Dp(3;3)Tpl-J1
83C--85C	3R:5688967..9202520	Dp(3;3)Tpl-J23
83C--84F	3R:5688967..8383247	Dp(3;3)Tpl-T21
83C--84E	3R:5688967..8130321	Dp(3;3)Tpl-T8
83E1--100D2	3R:6192284..31837725	Dp(3;Y)Tpl7
83E1--99E	3R:6192284..30323585	Dp(3;Y)Tpl11
84A--85A	3R:6625559..8767344	Dp(3;3)D1	FBst0305475
84D5--85F8	3R:7336076..10065507	Dp(3;3)Antp[73b-rv8]	FBst0305183
84E--88A	3R:7760099..14226397	Dp(3;3)Y13

*Inversion breakpoints (cytology mapped)* [Export into hitlist]
81-99E	3R:3461351..30323585	In(3R)D116.8
81-99B	3R:3461351..29775722	In(3R)CA52
81-98E	3R:3461351..28855898	In(3R)HR13
81-98C	3R:3461351..28383802	In(3R)CA33
81-98C	3R:3461351..28383802	In(3R)CA23
81-95F	3R:3461351..24380882	In(3R)284
81F-95D	3R:3461351..24063100	In(3R)253
81F-93E	3R:3461351..21645979	In(3R)C289
81-92A	3R:3461351..19695282	In(3R)SM26
81F-90C	3R:3461351..17916873	In(3R)1000
81F-89E2	3R:3461351..16847365	In(3R)iab4-3110
81F-89D	3R:3461351..16736155	In(3R)Mg137
81F-89B9	3R:3461351..16273584	In(3R)pnr[VX5]
81F-88B	3R:3461351..14415067	In(2R)TSR-8[Sz]
81-85D	3R:3461351..9600373	In(3R)BTD3
81F-85D	3R:3461351..9600373	In(3R)DTD133
81-84E	3R:3461351..8130321	In(3R)CA37
82A-87C	3R:4208470..12773541	In(3R)AL13
82-84	3R:4208470..8383247	In(3R)LD29
82D-98E	3R:4657100..28855898	In(3R)IC67-327
82F-92D	3R:5101129..20259177	In(3R)SM23
82F-92B	3R:5101129..19971232	In(3R)Mg145
83-99	3R:5364156..30597427	In(3R)LD30
83A-88E	3R:5364156..15316331	In(3R)Alt-4
83C-85B	3R:5688967..8979804	In(3R)Mg67
83C-85B	3R:5688967..8979804	In(3R)PS31
83D-96A	3R:5948971..24840518	In(3R)Mg140
83D-94E	3R:5948971..23363938	In(3R)SM22
83E-86A	3R:6192284..10335171	In(3R)SM34
84A4-85D	3R:6695513..9600373	In(3R)pb[26]
84B-97A	3R:6896978..26362804	In(3R)Mg146
84B-97A	3R:6896978..26362804	In(3R)Mg147
84B1-95F	3R:6896978..24380882	In(3R)Scr[18]
84B-92D	3R:6896978..20259177	In(3R)Dem1-9
84B1-85F	3R:6896978..10201762	In(3R)Antp[R]	2 stocks
84B-85C	3R:6896978..9202520	In(3R)Dem4-3
84B2-87C	3R:6986096..12773541	In(3R)Antp[5]
84B2-85E	3R:6986096..9907978	In(3R)Antp[B]	3 stocks
84C-93D3	3R:7097477..21290337	In(3R)e[H3]
84C-89B	3R:7097477..16576178	In(3R)84C;89B
84C-87C	3R:7097477..12773541	In(3R)Two-b100
84D-91E	3R:7174723..19070332	In(3R)TC
84D-89F	3R:7174723..17256343	In(3R)84D;89F
84D-86C	3R:7174723..11013213	In(3R)St-L
84E-99E	3R:7760099..30323585	In(3R)AL14
84E-91C	3R:7760099..18793975	In(3R)UF
84E-88A	3R:7760099..14226397	In(3R)ats-P
84E-87C	3R:7760099..12773541	In(3R)St-O
84E1-85E1	3R:7760099..9632730	In(3R)dsx[23]	FBst0001849
81;84E;87C7-87D1;89B;94A;98F	3R:7760099..8130321	In(3R)kar[3H]

*Transposition and translocation breakpoints (cytology mapped)* [Export into hitlist]
81F--88B	3R:3461351..14415067	Dp(3;3)P26