Cytology	Observed or estimated sequence coordinates	Symbol	Stocks


*Genes (mapped to the sequence)* [Export into hitlist]
86B3-86B4	3R:10401032..10402966	mthl11	11 stocks
86B4-86B4	3R:10402967..10407285	CG6325	16 stocks
86B4-86B4	3R:10408137..10408227	mir-994	6 stocks
86B4-86B4	3R:10408302..10408369	mir-318	6 stocks
86B4-86B4,86B3-86B6,86B3-86B6	3R:10408618..10412869	Irp-1B	13 stocks
86B4-86B4	3R:10413301..10414242	Rrp46	7 stocks
86B4-86B4	3R:10414218..10416046	CG6345	4 stocks
86B4-86B4	3R:10428137..10428424	CG46270
86B4-86B4,86B6-86C1	3R:10434789..10436704	Cyp12e1	77 stocks

*Genes (mapped, but not to the sequence)* [Export into hitlist]
81-100	3R:3461351..32068446	cant	2 stocks
81-100	3R:3461351..32068446	l(3)cl-R3	2 stocks
86B-86B	3R:10335172..10473725	Su(var)3-5

*Insertions (cytology mapped)* [Export into hitlist]
86B-86B	3R:10335172..10473725	P{lacW}S003831a
86B-86B	3R:10335172..10473725	P{lArB}l(3)A143.1F3[A143.1F3]
86B-86B	3R:10335172..10473725	P{A[[10]]O[[31]]}1
86B-86B	3R:10335172..10473725	P{WF6}W15
86B-86B	3R:10335172..10473725	P{WF6}R32
86B-86B	3R:10335172..10473725	P{WF6}W33
86B-86B	3R:10335172..10473725	P{WF6}84
86B-86B	3R:10335172..10473725	P{lacW}S095808a
86B-86B	3R:10335172..10473725	P{lacW}l(3)S120710[S120710]
86B3-86B4	3R:10384879..10440201	TI{2A-GAL4}mthl11[2A-GAL4]	FBst0084658
86B3-86B4	3R:10384879..10440201	TI{2A-lexA::p65}mthl11[2A-lexA]	FBst0084406
86B3-86B4	3R:10384879..10440201	TI{TI}mthl11[attP]	FBst0084527
86B3-86B4	3R:10384879..10440201	TI{2A-EGFP}mthl11[CCT1008C]
86B4-86B4	3R:10401716..10440201	P{GSV2}GS50484
86B4-86B4	3R:10401716..10440201	P{GSV6}GS16093
86B4-86B4	3R:10401716..10440201	TI{TI}Irp-1B[3F]
86B4-86B4	3R:10401716..10440201	TI{TI}mir-318[KO]	FBst0058927
86B4-86B4	3R:10401716..10440201	TI{TI}Irp-1B[KO]
86B4-86B4	3R:10401716..10440201	TI{EGFP}mir-318[Δ1]
86B4-86B4	3R:10401716..10440201	P{GSV2}GS50203
86B4-86B4	3R:10401716..10440201	TI{TI}mir-994[KO]	FBst0058964

*Insertions (sequence mapped)* [Export into hitlist]
86B4	3R:10402675..10402675	Mi{MIC}mthl11[MI11235]	FBst0055597
99C2-99C2	3R:10407161..10407161	P{EP}CG6325[EP3019]
86B4	3R:10407240..10407240	P{Mae-UAS.6.11}CG6325[LA00464]	2 stocks
86B4	3R:10407270..10407270	P{GAL4::VP16-nanos.UTR}CG6325[MVD1]	9 stocks
86B4	3R:10407283..10407283	P{GSV6}GS15934	FBst0323685
86B4	3R:10407284..10407284	P{GSV6}GS10378
86B4	3R:10407289..10407289	P{GSV7}GS22780	FBst0322036
86B4-86B4	3R:10412842..10412842	P{Mae-UAS.6.11}Irp-1B[DP00726]	FBst0021822
86A6-86A6	3R:10412882..10412882	P{EP}Irp-1B[EP961]
86B4	3R:10412890..10412890	P{GSV6}GS17452	FBst0320543
86B4	3R:10412891..10412891	P{GSV6}GS12383
86B4	3R:10412894..10412894	P{GSV6}GS11258
86B4-86B4	3R:10412895..10412895	P{PTT-GB}Irp-1B[CB02050]
86A6	3R:10412898..10412898	P{EPgy2}Irp-1B[EY00440]	FBst0014849
86B4-86B4	3R:10412899..10412899	P{wHy}Irp-1B[DG03608]
86B4	3R:10412902..10412902	P{GSV6}GS13165
86B4	3R:10412902..10412902	P{GSV7}GS22516	FBst0321924
86B4	3R:10425756..10425756	Mi{MIC}MI05817
86B4	3R:10437268..10437289	PBac{WH}f04399

*Deleted segments (sequence mapped)* [Export into hitlist]
85F16--86C7	3R:10170501..10886760	Df(3R)ED5495	2 stocks

*Duplicated segments (sequence mapped)* [Export into hitlist]
86A8-86B4	3R:10326387..10420649	Dp(3;2)GV-CH321-02P02	FBst0090083
86B2-86B6	3R:10376580..10465865	Dp(3;2)GV-CH321-18B09	FBst0090205

*Deleted segments (cytology mapped)* [Export into hitlist]
85D8--86B4	3R:9271129..10440201	Df(3R)by77
85E15--95C8	3R:9893362..23892547	Df(3R)pug[D-rv7]
85F1--86C8	3R:9907979..10917238	Df(3R)BSC38	2 stocks
86A1--95B3	3R:10201763..23780006	Df(3R)pug[D-rv1]
86B2--86C2	3R:10369832..10618838	Df(3R)Exel6266

*Duplicated segments (cytology mapped)* [Export into hitlist]
83C--95C	3R:5688967..23940806	Dp(3;3)M37
83C--86E	3R:5688967..11785612	Dp(3;3)Tpl-J1
83E1--100D2	3R:6192284..31837725	Dp(3;Y)Tpl7
83E1--99E	3R:6192284..30323585	Dp(3;Y)Tpl11
84E--88A	3R:7760099..14226397	Dp(3;3)Y13
85D1--87A5	3R:9202521..12050497	Dp(3;3)M86D[+]2
85D--86E	3R:9202521..11785612	Dp(3;2)dpp[d80]
85F--88A	3R:9907979..14226397	Dp(3;3)124.3
85F1--86E5	3R:9907979..11445282	Dp(3;3)M86D[+]31
85F8--87F7	3R:10045567..13678457	Dp(3;3)D7
86A1--87C5	3R:10201763..12696763	Dp(3;3)D1a
86A1--86F1	3R:10201763..11785622	Dp(3;3)D2
86B4--87E1	3R:10401716..13201240	Dp(3;3)M86D[+]20
86B4--86D8	3R:10401716..11242737	Dp(3;3)D26

*Inversion breakpoints (cytology mapped)* [Export into hitlist]
81-99E	3R:3461351..30323585	In(3R)D116.8
81-99B	3R:3461351..29775722	In(3R)CA52
81-98E	3R:3461351..28855898	In(3R)HR13
81-98C	3R:3461351..28383802	In(3R)CA33
81-98C	3R:3461351..28383802	In(3R)CA23
81-95F	3R:3461351..24380882	In(3R)284
81F-95D	3R:3461351..24063100	In(3R)253
81F-93E	3R:3461351..21645979	In(3R)C289
81-92A	3R:3461351..19695282	In(3R)SM26
81F-90C	3R:3461351..17916873	In(3R)1000
81F-89E2	3R:3461351..16847365	In(3R)iab4-3110
81F-89D	3R:3461351..16736155	In(3R)Mg137
81F-89B9	3R:3461351..16273584	In(3R)pnr[VX5]
81F-88B	3R:3461351..14415067	In(2R)TSR-8[Sz]
82A-87C	3R:4208470..12773541	In(3R)AL13
82D-98E	3R:4657100..28855898	In(3R)IC67-327
82F-92D	3R:5101129..20259177	In(3R)SM23
82F-92B	3R:5101129..19971232	In(3R)Mg145
83-99	3R:5364156..30597427	In(3R)LD30
83A-88E	3R:5364156..15316331	In(3R)Alt-4
83D-96A	3R:5948971..24840518	In(3R)Mg140
83D-94E	3R:5948971..23363938	In(3R)SM22
84B-97A	3R:6896978..26362804	In(3R)Mg146
84B-97A	3R:6896978..26362804	In(3R)Mg147
84B1-95F	3R:6896978..24380882	In(3R)Scr[18]
84B-92D	3R:6896978..20259177	In(3R)Dem1-9
84B2-87C	3R:6986096..12773541	In(3R)Antp[5]
84C-93D3	3R:7097477..21290337	In(3R)e[H3]
84C-89B	3R:7097477..16576178	In(3R)84C;89B
84C-87C	3R:7097477..12773541	In(3R)Two-b100
84D-91E	3R:7174723..19070332	In(3R)TC
84D-89F	3R:7174723..17256343	In(3R)84D;89F
84D-86C	3R:7174723..11013213	In(3R)St-L
84E-99E	3R:7760099..30323585	In(3R)AL14
84E-91C	3R:7760099..18793975	In(3R)UF
84E-88A	3R:7760099..14226397	In(3R)ats-P
84E-87C	3R:7760099..12773541	In(3R)St-O
84F-91D	3R:8130322..18945258	In(3R)ZP28
84F-87A	3R:8130322..12147054	In(3R)Mg68
84F-86D	3R:8130322..11284445	In(3R)PC
85A-96E	3R:8383248..25712016	In(3R)V103
85A4-89A10	3R:8584309..15971534	In(3R)EJ
85A6-88A	3R:8703789..14226397	In(3R)p[7]
85C-88F	3R:8979805..15623019	In(3R)KE
85C-88B	3R:8979805..14415067	In(3R)SM33
85C-87E	3R:8979805..13484493	In(3R)Alt-5
85D-95E	3R:9202521..24189602	In(3R)K19
85D-94E	3R:9202521..23363938	In(3R)Dem1-8
85D-87B	3R:9202521..12535255	In(3R)Dem10-4
85D-87B	3R:9202521..12535255	In(3R)K13
85D-87B	3R:9202521..12535255	In(3R)K21
85E-91A	3R:9600374..18446794	In(3R)AL15
85F-97F	3R:9907979..27434247	In(3R)IC67-79
86B-98E	3R:10335172..28855898	In(3R)Dem3-7
86B-92F	3R:10335172..20794570	In(3R)CW
86B-87F	3R:10335172..13843302	In(3R)St-R

*Transposition and translocation breakpoints (cytology mapped)* [Export into hitlist]
81F--88B	3R:3461351..14415067	Dp(3;3)P26