Cytology	Observed or estimated sequence coordinates	Symbol	Stocks


*Genes (mapped to the sequence)* [Export into hitlist]
94A16-94B1	3R:22468512..22486969	Nrx-1	17 stocks
94B1-94B1	3R:22480813..22480938	mir-4952
94B1-94B1	3R:22487039..22488110	Pfdn5	5 stocks
94B1-94B1	3R:22488033..22488955	CG5376	5 stocks
94B1-94B1,94B1-94B2	3R:22489105..22491439	CCT1	8 stocks
94B1-94B1	3R:22491829..22492381	tHMG1	10 stocks
94B1-94B1	3R:22492953..22493746	tHMG2	11 stocks
94B1-94B2	3R:22497215..22520078	Octβ1R	80 stocks

*Genes (mapped, but not to the sequence)* [Export into hitlist]
81-100	3R:3461351..32068446	cant	2 stocks
81-100	3R:3461351..32068446	l(3)cl-R3	2 stocks
86C-100F	3R:10473726..32068446	mei-P44
94A1-94E2	3R:22019296..23159941	wo	6 stocks
94A8-94B5	3R:22382086..22608248	quag
94B-94B	3R:22474685..22666854	Nc94B
94B-94B	3R:22474685..22666854	l(3)94Ba
94B-94B	3R:22474685..22666854	anon-J7
94B-94B	3R:22474685..22666854	94Che

*Insertions (cytology mapped)* [Export into hitlist]
94A16-94B1	3R:22463131..22506149	TI{TI}Nrx-1[ΔPDZ-AT]
94A16-94B1	3R:22463131..22506149	TI{TI}Nrx-1[HA]
94A16-94B1	3R:22463131..22506149	TI{TI}Nrx-1[Venus]
94A16-94B1	3R:22463131..22506149	TI{TI}Nrx-1[AT]
94B--94C	3R:22474685..22827295	P{lacZ}Tracheal-6
94B-94C	3R:22474685..22827295	P{lArB}A107.1F3
94B-94C	3R:22474685..22827295	P{lArB}A107.1M3
94B-94B	3R:22474685..22666854	P{lacW}S002405b
94B-94B	3R:22474685..22666854	P{lacW}S142603a
94B-94B	3R:22474685..22666854	P{w[en.3]}11A
94B-94B	3R:22474685..22666854	P{lacW}l(3)S073403[S073403]
94B-94B	3R:22474685..22666854	P{Sgs1-lacZ.C-623}94B
94B1--94B4	3R:22474685..22580633	P{lacW}l(3)S129803[S129803]
94B1-94B2	3R:22474685..22537614	TI{2A-lexA::GAD}Octβ1R[2A-A.lexA.KI]	FBst0086288
94B1-94B2	3R:22474685..22537614	TI{2A-GAL4}Octβ1R[2A-C.GAL4.KI]	FBst0086140
94B1-94B2	3R:22474685..22537614	PBac{WHr}Octβ1R[1]
94B1-94B2	3R:22474685..22537614	TI{TI}Octβ1R[smV5]	FBst0605239
94B1-94B2	3R:22474685..22537614	TI{GAL4}Octβ1R[KOGal4]
94B1-94B2	3R:22474685..22537614	TI{2A-GAL4}Octβ1R[2A-A.GAL4.KI]	FBst0086139
94B1-94B2	3R:22474685..22537614	TI{2A-lexA::GAD}Octβ1R[2A-A.lexA]
94B1-94B2	3R:22474685..22537614	TI{TI}Octβ1R[KDRT-STOP-smV5]	FBst0605247
94B1-94B2	3R:22474685..22537614	TI{TI}Octβ1R[attP]	FBst0084554
94B1-94B2	3R:22474685..22537614	TI{2A-lexA::GAD}Octβ1R[2A-C.lexA.KI]	FBst0086281
94B1-94B2	3R:22474685..22537614	TI{2A-p65(AD)::Zip+}Octβ1R[2A-A.p65AD]
94B1-94B2	3R:22474685..22537614	TI{2A-EGFP}Octβ1R[CCT1076C]

*Insertions (sequence mapped)* [Export into hitlist]
94B1-94B1	3R:22475637..22475637	P{EP}Nrx-1[G9024]	FBst1023100
94B1	3R:22476881..22476881	P{GSV2}GS7152	FBst0309053
94B1	3R:22478252..22478252	PBac{PB}Nrx-1[c03581]
94B1	3R:22484423..22484423	Mi{MIC}Nrx-1[MI02579]	FBst0061696
94B1	3R:22487225..22487225	P{EP}Pfdn5[G7008]	FBst0033273
94B4-94B4	3R:22488455..22488455	P{EP}CG5376[EP709]	FBst0017194
94B1	3R:22490582..22490582	PBac{PB}CCT1[c03987]	FBst0011325
94B1	3R:22491119..22491119	PBac{PB}CCT1[c01712]
94B1-94B1	3R:22491127..22491127	PBac{602.P.SVS-1}CCT1[CPTI000037]	FBst0325094
94B1-94B1	3R:22491358..22491358	PBac{IT.GAL4}CCT1[0157-G4]	FBst0062675
94B1	3R:22491417..22491417	PBac{WH}CCT1[f01007]
94B1	3R:22492409..22492409	Mi{MIC}MI10664	FBst0056222
94B1	3R:22492606..22492606	Mi{ET1}MB12252	FBst0029285
94B1	3R:22492758..22492758	PBac{WH}f06220
94B1	3R:22492758..22492758	PBac{WH}f06208
94B4	3R:22493178..22493178	P{SUPor-P}tHMG2[KG05938]	FBst0014220
94B1	3R:22496869..22496869	Mi{MIC}MI02465

*Deleted segments (sequence mapped)* [Export into hitlist]
93F14--94B5	3R:21880995..22587739	Df(3R)ED6085	2 stocks
94A1--94C1	3R:22042224..22698419	Df(3R)ED6090	2 stocks
94A2--94C4	3R:22133788..22726307	Df(3R)ED6093	2 stocks
94A6--94B2	3R:22367520..22510468	Df(3R)BSC685	FBst0026537
94A6--94B2	3R:22367973..22530780	Df(3R)Exel6191	FBst0007670

*Duplicated segments (sequence mapped)* [Export into hitlist]
94A14-94B2	3R:22432435..22521074	Dp(3;2)GV-CH321-84E12	FBst0089883

*Deleted segments (cytology mapped)* [Export into hitlist]
85E15--95C8	3R:9893362..23892547	Df(3R)pug[D-rv7]
86A1--95B3	3R:10201763..23780006	Df(3R)pug[D-rv1]
86B6--94F4	3R:10449672..23476389	Df(3R)pug[D-rv10]
86C3--95B4	3R:10618839..23780016	Df(3R)pug[D-rv2]
86C3--95A5	3R:10618839..23649044	Df(3R)pug[D-rv6]
86C3--94F3	3R:10618839..23454611	Df(3R)pug[D-rv4]
93E--94D	3R:21400810..23114712	Df(3R)5C1	3 stocks
93E--94C	3R:21400810..22827295	Df(3R)17D1
93F--94D	3R:21645980..23114712	Df(3R)15CE1
93F11--94D13	3R:21804851..23114712	Df(3R)hh	2 stocks
93F13--94D2	3R:21826895..22892062	Df(3R)BSC34	FBst0007015
94A--94D1	3R:22019296..22859678	Df(3R)hhE23
94A3--94D4	3R:22167031..22961925	Df(3R)23D1	FBst0002586

*Duplicated segments (cytology mapped)* [Export into hitlist]
83C--95C	3R:5688967..23940806	Dp(3;3)M37
83E1--100D2	3R:6192284..31837725	Dp(3;Y)Tpl7
83E1--99E	3R:6192284..30323585	Dp(3;Y)Tpl11
88D--100B	3R:14675783..31275051	Dp(3;3)SMG35
90A--95A1	3R:17256344..23546750	Dp(3;3)M95A[+]33a
90A--95A1	3R:17256344..23546750	Dp(3;3)M95A[+]33
90E--98B	3R:18004999..28082526	Dp(3;3)M95A[+]13	3 stocks
91B2--97F	3R:18476184..27434247	Dp(3;3)M96C[+]20
91D--94D	3R:18793976..23114712	Dp(3;3)M48
91F--95A1	3R:19070333..23546750	Dp(3;3)M95A[+]10
91F--94D	3R:19070333..23114712	Dp(3;3)M73
92A3--95A2	3R:19373736..23588736	Dp(3;3)M95A[+]h67
92E--98C	3R:20259178..28383802	Dp(3;3)M95A[+]30
92E--98C	3R:20259178..28383802	Dp(3;3)M95A[+]30a
92E1--98A	3R:20259178..27670954	Dp(3;3)M95A[+]11
92E1--96A	3R:20259178..24840518	Dp(3;3)H[+]
92E1--96A1	3R:20259178..24420760	Dp(3;3)M95A[+]8
92E--95B	3R:20259178..23812801	Dp(3;3)M39
92E--95A1	3R:20259178..23546750	Dp(3;3)M95A[+]24
92E--95A1	3R:20259178..23546750	Dp(3;3)M95A[+]4a
92F--94D	3R:20525401..23114712	Dp(3;3)M38
93B--95A	3R:20983974..23714950	Dp(3;3)M49
93D--95D	3R:21232816..24063100	Dp(3;3)M95A[+]7
93D--95A	3R:21232816..23714950	Dp(3;3)M44
93D5--99B1	3R:21314671..29505909	Dp(3;3)M95A[+]12
93E--95C	3R:21400810..23940806	Dp(3;3)M95A[+]21
93E--95C	3R:21400810..23940806	Dp(3;3)M95A[+]1a
93E--94F	3R:21400810..23509789	Dp(3;3)M46
93F--96B	3R:21645980..25101913	Dp(3;3)M95A[+]6
94A1--96F	3R:22019296..26106891	Dp(3;3)M96C[+]19
94A1--95A10	3R:22019296..23714950	Dp(3;3)M95A[+]4
94B--96A	3R:22474685..24840518	Dp(3;3)M47
94B1--95B8	3R:22474685..23805134	Dp(3;3)M95A[+]h52

*Inversion breakpoints (cytology mapped)* [Export into hitlist]
81-99E	3R:3461351..30323585	In(3R)D116.8
81-99B	3R:3461351..29775722	In(3R)CA52
81-98E	3R:3461351..28855898	In(3R)HR13
81-98C	3R:3461351..28383802	In(3R)CA33
81-98C	3R:3461351..28383802	In(3R)CA23
81-95F	3R:3461351..24380882	In(3R)284
81F-95D	3R:3461351..24063100	In(3R)253
82D-98E	3R:4657100..28855898	In(3R)IC67-327
83-99	3R:5364156..30597427	In(3R)LD30
83D-96A	3R:5948971..24840518	In(3R)Mg140
83D-94E	3R:5948971..23363938	In(3R)SM22
84B-97A	3R:6896978..26362804	In(3R)Mg146
84B-97A	3R:6896978..26362804	In(3R)Mg147
84B1-95F	3R:6896978..24380882	In(3R)Scr[18]
84E-99E	3R:7760099..30323585	In(3R)AL14
85A-96E	3R:8383248..25712016	In(3R)V103
85D-95E	3R:9202521..24189602	In(3R)K19
85D-94E	3R:9202521..23363938	In(3R)Dem1-8
85F-97F	3R:9907979..27434247	In(3R)IC67-79
86B-98E	3R:10335172..28855898	In(3R)Dem3-7
86D-97A	3R:11013214..26362804	In(3R)Nel-D
86E-98F	3R:11284446..29184631	In(3R)Mg139
86E-97C	3R:11284446..26733804	In(3R)St-E
86F-100E	3R:11785613..32068441	In(3R)M
86F-98F	3R:11785613..29184631	In(3R)IW12
86F-96A	3R:11785613..24840518	In(3R)PS32
87A-100F	3R:11871713..32068446	In(3R)St-C
87B-100F	3R:12147055..32068446	In(3R)IW13
87C-98F	3R:12535256..29184631	In(3R)Mg157
87C-95A	3R:12535256..23714950	In(3R)KOG-M
87E-97A	3R:13164290..26362804	In(3R)Mg21
87E-95A	3R:13164290..23714950	In(3R)SM24
87E-94E	3R:13164290..23363938	In(3R)Alt-6
88-97A	3R:13843303..26362804	In(3R)SM27
88C-98F	3R:14415068..29184631	In(3R)PS35
88C-96E	3R:14415068..25712016	In(3R)PE
88C-96D	3R:14415068..25439751	In(3R)KH
89A-99D	3R:15623020..30152942	In(3R)St-M
89B-98B	3R:16027430..28082526	In(3R)P33
89B-96A	3R:16027430..24840518	In(3R)PH
89B9-97D	3R:16229403..27054991	In(3R)sbd[l]
89C-96A	3R:16576179..24840518	In(3R)PS47
89C2-96A19	3R:16576189..24754796	In(3R)ven
89E-98B	3R:16736156..28082526	In(3R)89E-98B
89E2-99F	3R:16791761..30597427	In(3R)abd-A[M1]
89E2-96A	3R:16791761..24840518	In(3R)iab3[793]
89E3-100C	3R:16847366..31613779	In(3R)Abd-B[iab9-48]
89E5-96A13	3R:16951015..24654655	In(3R)m53e
89F-96A	3R:17123623..24840518	In(3R)Mg143
89F-95A	3R:17123623..23714950	In(3R)89386
90B-98A	3R:17436925..27670954	In(3R)St-H
90B-97D	3R:17436925..27054991	In(3R)Dem1-10
90E-99A	3R:18004999..29468940	In(3R)Alt-7
90F-96A	3R:18118268..24840518	In(3R)PI
90F-94E	3R:18118268..23363938	In(3R)ZP27
91B-97C	3R:18446795..26733804	In(3R)ZP24
91B-96B	3R:18446795..25101913	In(3R)C208
91D-98B	3R:18793976..28082526	In(3R)Mg136
92-97	3R:19261020..27434247	In(3R)CA35
92A-94C	3R:19261020..22827295	In(3R)Dem1-11
92B-98C	3R:19695283..28383802	In(3R)SM25
92B-95A	3R:19695283..23714950	In(3R)Dem1-12
92C-99F	3R:19971233..30597427	In(3R)IW22
92C-96A	3R:19971233..24840518	In(3R)IW16
92C-96A	3R:19971233..24840518	In(3R)92C;96A
92D-100A	3R:20096868..30928228	In(3R)92D;100A
92D-98F	3R:20096868..29184631	In(3R)89300
92E-100E	3R:20259178..32068441	In(3R)92E-100E
92E-97E	3R:20259178..27264826	In(3R)AL17
92E-97C	3R:20259178..26733804	In(3R)KK
92E-97A	3R:20259178..26362804	In(3R)IC
92F-95C	3R:20525401..23940806	In(3R)SM31
93A-97A	3R:20794571..26362804	In(3R)Mg148
93D-98F	3R:21232816..29184631	In(3R)PS49
93D-98F	3R:21232816..29184631	In(3R)KOG-N
93D-98B	3R:21232816..28082526	In(3R)St-Q
93D3-95E	3R:21281403..24189602	In(3R)100.265
93E-100F	3R:21400810..32068446	In(3R)ML193
93E-97D	3R:21400810..27054991	In(3R)IW17
93F-99C	3R:21645980..29957664	In(3R)V16
93F-98C	3R:21645980..28383802	In(3R)Dem1-14
94A-98C	3R:22019296..28383802	In(3R)ZP30