FB2025_05 , released December 11, 2025


Cytology	Observed or estimated sequence coordinates	Symbol	Stocks

*Genes (mapped to the sequence)* [Export into hitlist]
96E4-96E6	3R:25611013..25624662	Npl4	12 stocks
96E4-96E5	3R:25613666..25614451	CG5079	3 stocks
96E5-96E5	3R:25618414..25621838	CG5071	5 stocks

*Genes (mapped, but not to the sequence)* [Export into hitlist]
81-100	3R:3461351..32068446	cant	2 stocks
81-100	3R:3461351..32068446	l(3)cl-R3	2 stocks
86C-100F	3R:10473726..32068446	mei-P44
95A-97A	3R:23509790..26362804	M(3)96CF

*Insertions (cytology mapped)* [Export into hitlist]
95--96	3R:23509790..26106891	P{lacW}Y237
96-96	3R:24380883..26106891	P{Ddc1/4}96
96D--96F	3R:25292352..26106891	P{esg}18
96E-F	3R:25439752..26106891	P{p14.ey}96E-F
96E-96E	3R:25439752..25712016	H{Lw2}SW158
96E-96E	3R:25439752..25712016	P{Car20y}96E	1118 stocks
96E5-96E5	3R:25614277..25622337	PBac{PB}c03354

*Insertions (sequence mapped)* [Export into hitlist]
96E5-96E5	3R:25617472..25617472	PBac{768.FSVS-0}Npl4[CPTI003678]	FBst0324859
96E5	3R:25620814..25620814	Mi{MIC}Npl4[MI04098]	FBst0052205
96E5	3R:25622083..25622083	Mi{MIC}Npl4[MI01244]	FBst0035058
96E5_r6	3R:25622083..25622083	Mi{Trojan-GAL4.1}Npl4[MI01244-TG4.1]	FBst0077704

*Deleted segments (sequence mapped)* [Export into hitlist]
96E2--96E6	3R:25515898..25637876	Df(3R)Exel6203	FBst0007682

*Duplicated segments (sequence mapped)* [Export into hitlist]
96E3-96E6	3R:25556648..25634744	Dp(3;2)GV-CH321-77L17	FBst0089868

*Deleted segments (cytology mapped)* [Export into hitlist]
95A--97A	3R:23509790..26362804	Df(3R)Su9
96A1--96E	3R:24380883..25712016	Df(3R)L16

*Duplicated segments (cytology mapped)* [Export into hitlist]
83E1--100D2	3R:6192284..31837725	Dp(3;Y)Tpl7
83E1--99E	3R:6192284..30323585	Dp(3;Y)Tpl11
88D--100B	3R:14675783..31275051	Dp(3;3)SMG35
90E--98B	3R:18004999..28082526	Dp(3;3)M95A[+]13	3 stocks
91B2--97F	3R:18476184..27434247	Dp(3;3)M96C[+]20
92E--98C	3R:20259178..28383802	Dp(3;3)M95A[+]30
92E--98C	3R:20259178..28383802	Dp(3;3)M95A[+]30a
92E1--98A	3R:20259178..27670954	Dp(3;3)M95A[+]11
93D5--99B1	3R:21314671..29505909	Dp(3;3)M95A[+]12
94A1--96F	3R:22019296..26106891	Dp(3;3)M96C[+]19
94C7--98A	3R:22786737..27670954	Dp(3;3)M96C[+]14
94C7--97D	3R:22786737..27054991	Dp(3;3)M96C[+]21
94D--99E	3R:22827296..30323585	Dp(3;3)M95A[+]16
94D--96E	3R:22827296..25712016	Dp(3;3)M95A[+]13a
94D--96E	3R:22827296..25712016	Dp(3;3)M95A[+]23
95A1--98B	3R:23509790..28082526	Dp(3;3)M95A[+]9
95B--97A	3R:23714951..26362804	Dp(3;3)M96C[+]9
96A1--100F	3R:24380883..32068446	Dp(3;3)M96C[+]16
96A--97B	3R:24380883..26558307	Dp(3;3)M76
96A--96F14	3R:24380883..26106891	Dp(3;3)Su[8]	2 stocks
96A20--99F4	3R:24754797..30452016	Dp(3;3)M96C[+]18
96A20--96E	3R:24754797..25712016	Dp(3;3)M96C[+]8
96B1--96E	3R:24840519..25712016	Dp(3;3)M96C[+]13

*Inversion breakpoints (cytology mapped)* [Export into hitlist]
81-99E	3R:3461351..30323585	In(3R)D116.8
81-99B	3R:3461351..29775722	In(3R)CA52
81-98E	3R:3461351..28855898	In(3R)HR13
81-98C	3R:3461351..28383802	In(3R)CA33
81-98C	3R:3461351..28383802	In(3R)CA23
82D-98E	3R:4657100..28855898	In(3R)IC67-327
83-99	3R:5364156..30597427	In(3R)LD30
84B-97A	3R:6896978..26362804	In(3R)Mg146
84B-97A	3R:6896978..26362804	In(3R)Mg147
84E-99E	3R:7760099..30323585	In(3R)AL14
85A-96E	3R:8383248..25712016	In(3R)V103
85F-97F	3R:9907979..27434247	In(3R)IC67-79
86B-98E	3R:10335172..28855898	In(3R)Dem3-7
86D-97A	3R:11013214..26362804	In(3R)Nel-D
86E-98F	3R:11284446..29184631	In(3R)Mg139
86E-97C	3R:11284446..26733804	In(3R)St-E
86F-100E	3R:11785613..32068441	In(3R)M
86F-98F	3R:11785613..29184631	In(3R)IW12
87A-100F	3R:11871713..32068446	In(3R)St-C
87B-100F	3R:12147055..32068446	In(3R)IW13
87C-98F	3R:12535256..29184631	In(3R)Mg157
87E-97A	3R:13164290..26362804	In(3R)Mg21
88-97A	3R:13843303..26362804	In(3R)SM27
88C-98F	3R:14415068..29184631	In(3R)PS35
88C-96E	3R:14415068..25712016	In(3R)PE
89A-99D	3R:15623020..30152942	In(3R)St-M
89B-98B	3R:16027430..28082526	In(3R)P33
89B9-97D	3R:16229403..27054991	In(3R)sbd[l]
89E-98B	3R:16736156..28082526	In(3R)89E-98B
89E2-99F	3R:16791761..30597427	In(3R)abd-A[M1]
89E3-100C	3R:16847366..31613779	In(3R)Abd-B[iab9-48]
90B-98A	3R:17436925..27670954	In(3R)St-H
90B-97D	3R:17436925..27054991	In(3R)Dem1-10
90E-99A	3R:18004999..29468940	In(3R)Alt-7
91B-97C	3R:18446795..26733804	In(3R)ZP24
91D-98B	3R:18793976..28082526	In(3R)Mg136
92-97	3R:19261020..27434247	In(3R)CA35
92B-98C	3R:19695283..28383802	In(3R)SM25
92C-99F	3R:19971233..30597427	In(3R)IW22
92D-100A	3R:20096868..30928228	In(3R)92D;100A
92D-98F	3R:20096868..29184631	In(3R)89300
92E-100E	3R:20259178..32068441	In(3R)92E-100E
92E-97E	3R:20259178..27264826	In(3R)AL17
92E-97C	3R:20259178..26733804	In(3R)KK
92E-97A	3R:20259178..26362804	In(3R)IC
93A-97A	3R:20794571..26362804	In(3R)Mg148
93D-98F	3R:21232816..29184631	In(3R)PS49
93D-98F	3R:21232816..29184631	In(3R)KOG-N
93D-98B	3R:21232816..28082526	In(3R)St-Q
93E-100F	3R:21400810..32068446	In(3R)ML193
93E-97D	3R:21400810..27054991	In(3R)IW17
93F-99C	3R:21645980..29957664	In(3R)V16
93F-98C	3R:21645980..28383802	In(3R)Dem1-14
94A-98C	3R:22019296..28383802	In(3R)ZP30
94C-99F	3R:22666855..30597427	In(3R)VV10
94E-98D	3R:23114713..28644088	In(3R)C13
94E-97A	3R:23114713..26362804	In(3R)IA
95D-98F	3R:23940807..29184631	In(3R)KOG-O
95F-97B	3R:24189603..26558307	In(3R)Dem3-9
96A-100D	3R:24380883..31917440	In(3R)Mg70
96A-98B	3R:24380883..28082526	In(3R)ZP26
96B-99E	3R:24840519..30323585	In(3R)Dem4-5
96B-98A	3R:24840519..27670954	In(3R)Dem1-15
96C-98E	3R:25101914..28855898	In(3R)St-P
96C-98D	3R:25101914..28644088	In(3R)Dem1-16
96E-98F	3R:25439752..29184631	In(3R)J

*Transposition and translocation breakpoints (cytology mapped)* [Export into hitlist]
96E5-96E12-102B-102C	3R:25614277..25622337	T(3;4)A30

Cytology

Observed or estimated
sequence coordinates

Symbol

Stocks

Genes (mapped to the sequence) [Export into hitlist]

96E4-96E6

3R:25611013..25624662

Npl4

12 stocks

96E4-96E5

3R:25613666..25614451

CG5079