Cytology	Observed or estimated sequence coordinates	Symbol	Stocks	Feature type	Mapped by

1-20	X:103615..23108331	l(1)EH275a		gene	cytology
1-20	X:103615..23108331	ms(1)10		gene	cytology
1-20	X:103615..23108331	l(1)M86.4		gene	cytology
1-20	X:103615..23108331	l(1)U3		gene	cytology
1-20	X:103615..23108331	mei-99	FBst0004882	gene	cytology
1-20	X:103615..23108331	dh	FBst0001539	gene	cytology
1-20	X:103615..23108331	l(1)L25.7		gene	cytology
1-20	X:103615..23108331	l(1)M76.3		gene	cytology
1-20	X:103615..23108331	l(1)K84.3		gene	cytology
1-20	X:103615..23108331	l(1)Uc-1		gene	cytology
1-20	X:103615..23108331	l(1)BP		gene	cytology
1-20	X:103615..23108331	l(1)M95.1		gene	cytology
1-20	X:103615..23108331	l(1)5-39-1		gene	cytology
1-20	X:103615..23108331	ms(1)66		gene	cytology
1-20	X:103615..23108331	ms(1)294		gene	cytology
1-20	X:103615..23108331	l(1)K87.2		gene	cytology
1-20	X:103615..23108331	mei-269		gene	cytology
1-20	X:103615..23108331	ms(1)12		gene	cytology
1-20	X:103615..23108331	l(1)VA624		gene	cytology
1-20	X:103615..23108331	l(1)64	FBst0313556	gene	cytology
1-20	X:103615..23108331	c(1)a		gene	cytology
1-20	X:103615..23108331	l(1)14P11		gene	cytology
1-20	X:103615..23108331	mei-160	FBst0004878	gene	cytology
1B1-98C	X:408583..28383802	T(1;3)y[75r]		T/Tp breakpoint	cytology
1B1-98C	X:408583..28383802	T(1;3)y[67k5]		T/Tp breakpoint	cytology
1B1-60F4	X:408583..25101785	T(1;2)y[A76b37]		T/Tp breakpoint	cytology
1B1-20D	X:408583..22716656	In(1)y[A74e]		inversion breakpoint	cytology
1B1-20D	X:408583..22716656	In(1)y[A74b51]		inversion breakpoint	cytology
1B1-20A	X:408583..21675680	In(1)y[A79d2]		inversion breakpoint	cytology
1B1-20A	X:408583..21675680	In(1)y[A72d3]		inversion breakpoint	cytology
1B1-20A	X:408583..21675680	In(1)y[89d68]		inversion breakpoint	cytology
1B1-19E8	X:408583..21086629	In(1)y[88f86]		inversion breakpoint	cytology
1B-38E	X:408583..20812419	T(1;2)OR25		T/Tp breakpoint	cytology
1E-99A	X:991048..29468940	T(1;3)GA91	FBst0004636	T/Tp breakpoint	cytology
1E4-58E	X:1185508..22584651	T(1;2)RC66		T/Tp breakpoint	cytology
1F-99F	X:1254810..30597427	T(1;3)Dem1-8		T/Tp breakpoint	cytology
2A-60D	X:1368553..24747488	T(1;2)OR6		T/Tp breakpoint	cytology
2B-57D	X:1475669..21378741	T(1;2)Su(bw[D])42		T/Tp breakpoint	cytology
2B5-20F	X:1660982..23108331	In(1)GA106		inversion breakpoint	cytology
2B5-20A	X:1660982..21675680	In(1)VE891		inversion breakpoint	cytology
2C-97A10	X:1972107..26362804	T(1;3)slu		T/Tp breakpoint	cytology
3A-97A	X:2328358..26362804	T(1;3)M155		T/Tp breakpoint	cytology
3B1-20F	X:2666235..23108331	In(1)GE257		inversion breakpoint	cytology
3B-39E	X:2666235..21684084	T(1;2)OR28		T/Tp breakpoint	cytology
3B1-20A	X:2666235..21675680	In(1)GE228		inversion breakpoint	cytology
3C1-98D	X:2804156..28644088	T(1;3)ZWD9		T/Tp breakpoint	cytology
3C-97F	X:2804156..27434247	T(1;3)OR37		T/Tp breakpoint	cytology
3C-20F	X:2804156..23108331	In(1)w[is]		inversion breakpoint	cytology
3C1-39E2	X:2804156..21592349	T(1;2)w[70k18.1]		T/Tp breakpoint	cytology
3C-57B	X:2804156..21107330	T(1;2)Ee4		T/Tp breakpoint	cytology
3C-38E	X:2804156..20812419	T(1;2)OR84		T/Tp breakpoint	cytology
3C2-20C	X:2845023..22597814	In(1)w[77d]		inversion breakpoint	cytology
3C2-20B	X:2845023..22371346	In(1)w83c19		inversion breakpoint	cytology
3C2-20B	X:2845023..22371346	In(1)w88f83		inversion breakpoint	cytology
3C2-19E	X:2845023..21086629	In(1)w88c87		inversion breakpoint	cytology
3C2-19E4	X:2845023..20921597	In(1)w[89e52]		inversion breakpoint	cytology
3C3-20D2	X:2907915..22716656	In(1)w[m54l]		inversion breakpoint	cytology
3C5-20A	X:2976542..21675680	In(1)C171		inversion breakpoint	cytology
3C7-19E	X:3102328..21086629	In(1)N[8d5]		inversion breakpoint	cytology
4E-20F	X:4964040..23108331	In(1)l-v132		inversion breakpoint	cytology
6A1-19E8	X:6400666..21086629	In(1)RF19	2 stocks	inversion breakpoint	cytology
6C-98C	X:6585391..28383802	T(1;3)OR22		T/Tp breakpoint	cytology
7A3-20F	X:7193760..23108331	In(1)JA9	FBst0001399	inversion breakpoint	cytology
7B3-60E	X:7483043..25017640	T(1;2)ct[J1]		T/Tp breakpoint	cytology
7B3-96A	X:7483043..24840518	T(1;3)L54		T/Tp breakpoint	cytology
7B3-96A	X:7483043..24840518	T(1;3)ct[J2]		T/Tp breakpoint	cytology
7B3-95F	X:7483043..24380882	T(1;3)ct[J11]		T/Tp breakpoint	cytology
7C-20D	X:7801643..22716656	In(1)87g49		inversion breakpoint	cytology
7D-57B	X:7947830..21107330	T(1;2)Ee2		T/Tp breakpoint	cytology
7F-100A	X:8465639..30928228	T(1;3)M153		T/Tp breakpoint	cytology
8E-57B	X:9412384..21107330	T(1;2)27A2		T/Tp breakpoint	cytology
9F-98E	X:10781791..28855898	T(1;3)OR41		T/Tp breakpoint	cytology
10-38	X:10976636..20966124	T(1;2)OR85		T/Tp breakpoint	cytology
11-98	X:11982050..29184631	T(1;3)SP46		T/Tp breakpoint	cytology
11A-80C	X:11982050..23077120	T(1;3)OR28		T/Tp breakpoint	cytology
11B-60E	X:12525917..25017640	T(1;2)OR15		T/Tp breakpoint	cytology
12-92	X:13461046..20794570	T(1;3)SP53		T/Tp breakpoint	cytology
12B-20B	X:13646538..22371346	In(1)drp		inversion breakpoint	cytology
12C-80A	X:13757666..22843488	T(1;3)OR46		T/Tp breakpoint	cytology
12D-97A	X:13903439..26362804	T(1;3)OR51		T/Tp breakpoint	cytology
12E-57F	X:14080988..21758515	T(1;2)SP52		T/Tp breakpoint	cytology
12F-80B	X:14510751..22930515	T(1;3)OR24		T/Tp breakpoint	cytology
12F-58F	X:14510751..22675646	T(1;2)OR42		T/Tp breakpoint	cytology
13A-57E	X:14873202..21549017	T(1;2)SP110		T/Tp breakpoint	cytology
13A6-19E	X:15059748..21086629	In(1)RF24		inversion breakpoint	cytology
13F-19E	X:15795007..21086629	In(1)T4		inversion breakpoint	cytology
14A1-94D	X:15907609..23114712	T(1;3)shi[19]		T/Tp breakpoint	cytology
15E-40D	X:17066542..22061076	T(1;2)OR43		T/Tp breakpoint	cytology
16A-60C	X:17293690..24449698	T(1;2)SP43		T/Tp breakpoint	cytology
16A1-20F	X:17293690..23108331	In(1)Bar[M2]	2 stocks	inversion breakpoint	cytology
16A2-20A2	X:17357263..21535761	In(1)Bar[263-47]		inversion breakpoint	cytology
16D-98B	X:17776522..28082526	T(1;3)1-10		T/Tp breakpoint	cytology
16D-96D	X:17776522..25439751	T(1;3)Dem1-9		T/Tp breakpoint	cytology
17A-80B	X:18168380..22930515	T(1;3)OR14		T/Tp breakpoint	cytology
17A2-80C	X:18188580..23077120	T(1;3)os[bdw]		T/Tp breakpoint	cytology
17C-19E	X:18502715..21086629	In(1)N828.4		inversion breakpoint	cytology
18A1-19F6	X:18936075..21377455	l(1)v135		gene	cytology
18C-100A	X:19295065..30928228	T(1;3)SP80		T/Tp breakpoint	cytology
18E1--20F	X:19676127..23108331	Df(1)HF396	2 stocks	deleted segment	cytology
18E1-20A	X:19676127..21675680	fs(1)A273	2 stocks	gene	cytology
19A1--20F	X:19887082..23108331	Dp(1;Y)mal[+]	35 stocks	duplicated segment	cytology
19-19	X:19887082..21377455	P{arm-lacZ.V}JPV3		insertion	cytology
19A2--20B3	X:19887092..22371346	Df(1)EH653		deleted segment	cytology
19A4--20A5	X:19976856..21675680	Df(1)Si4		deleted segment	cytology
19A4--19E7	X:20026307..21028296	Df(1)BSC587	FBst0025421	deleted segment	sequence
19A6--20A2	X:20046909..21535761	Df(1)mal4		deleted segment	cytology
19A6--19F19	X:20046909..21377455	Df(1)mal7		deleted segment	cytology
19A6--19E8	X:20046909..21086629	Df(1)mal5	FBst0307162	deleted segment	cytology
19B-80A	X:20068758..22843488	T(1;3)OR18		T/Tp breakpoint	cytology
19C--20A4	X:20160524..21629040	Df(1)T107		deleted segment	cytology
19C--20A2	X:20160524..21535761	Df(1)T113		deleted segment	cytology
19C--19F	X:20160524..21377455	Dp(1;1)Si2		duplicated segment	cytology
19C1--19E7	X:20243402..21061001	Df(1)BSC644	FBst0025734	deleted segment	sequence
19C2--20A4	X:20302880..21629040	Df(1)D5		deleted segment	cytology
19C3--20A3	X:20306294..21582401	Df(1)mal6	2 stocks	deleted segment	cytology
19C4--19E4	X:20330405..20893536	Df(1)BSC646		deleted segment	sequence
19C4--19E5	X:20330430..20925190	Df(1)ED12405	FBst0313095	deleted segment	sequence
19D-99B	X:20413491..29775722	T(1;3)M160		T/Tp breakpoint	cytology
19D1--20F	X:20413491..23108331	Df(1)T124		deleted segment	cytology
19D1--20A2	X:20413491..21535761	Df(1)16-3-22	2 stocks	deleted segment	cytology
19D1--20A2	X:20413491..21535761	Df(1)T100		deleted segment	cytology
19D1--19E8	X:20413491..21086629	Df(1)run1112		deleted segment	cytology
19D-19E	X:20413491..21086629	P{X6}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{w[d1]9.3+X86}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{X6.4}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{w[d1]9.3+X88}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{X13}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{w[d1]9.3+X5}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{w[d1]9.3+X93}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{w[d1]9.3+X98}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{X6+X6.23}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{X87}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{w[d1]9.3}X80		insertion	cytology
19D-19E	X:20413491..21086629	P{3'X13}13.1		insertion	cytology
19D-19E	X:20413491..21086629	P{w[d1]9.3}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{w[d1]9.3+X71}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{w[d1]9.3+X96}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{X7}19DE		insertion	cytology
19D-19E	X:20413491..21086629	P{w[d1]9.3+X84}19DE		insertion	cytology
19E1--20F	X:20604986..23108331	Df(1)217		deleted segment	cytology
19E1--20F	X:20604986..23108331	Df(1)HM45		deleted segment	cytology
19E1--20E	X:20604986..22835497	Df(1)Q219		deleted segment	cytology
19E1--20E	X:20604986..22835497	Df(1)Q408		deleted segment	cytology
19E1--20E	X:20604986..22835497	Df(1)R-10-5		deleted segment	cytology
19E1--20A3	X:20604986..21582401	Df(1)R-9-1		deleted segment	cytology
19E-57E	X:20604986..21549017	T(1;2)OR73		T/Tp breakpoint	cytology
19E1--20A2	X:20604986..21535761	Df(1)B12	2 stocks	deleted segment	cytology
19E-57B	X:20604986..21107330	T(1;2)OR59		T/Tp breakpoint	cytology
19E-19E	X:20604986..21086629	P{Hsp70B+65}2		insertion	cytology
19E-19E	X:20604986..21086629	P{white-un2}9.3		insertion	cytology
19E-19E	X:20604986..21086629	P{GawB}C587	FBst0067747	insertion	cytology
19E;24F;29F;54B-19E;24F;29F;54B	X:20604986..21086629	T(1;2)OR72		T/Tp breakpoint	cytology
19E-19E	X:20604986..21086629	P{hsp70-penelope}19E		insertion	cytology
19E-19E	X:20604986..21086629	l(1)G0285		gene	cytology
19E1--19E4	X:20604986..20921597	Df(1)V51		deleted segment	cytology
19E1--19F4	X:20657411..21329022	Df(1)BSC626	FBst0025701	deleted segment	sequence
19E1--19E3	X:20681167..20765934	Dp(1;3)DC087	FBst0030251	duplicated segment	sequence
19E2--20F	X:20684139..23108331	Dp(1;Y)y[+]mal[171]	FBst0307207	duplicated segment	cytology
19E2--20F	X:20684139..23108331	Df(1)T103		deleted segment	cytology
19E2--20F	X:20684139..23108331	Df(1)GA40		deleted segment	cytology
19E2--20F	X:20684139..23108331	Df(1)T138		deleted segment	cytology
19E2--20F	X:20684139..23108331	Df(1)N77	2 stocks	deleted segment	cytology
19E2--20F	X:20684139..23108331	Df(1)RF21		deleted segment	cytology
19E2--20E	X:20684139..22835497	Df(1)7108		deleted segment	cytology
19E2--20A2	X:20684139..21535761	Df(1)JC37		deleted segment	cytology
19E2--19F6	X:20684139..21377455	Df(1)GA37	2 stocks	deleted segment	cytology
19E2--19E8	X:20684139..21086629	Df(1)B57		deleted segment	cytology
19E2-80	X:20684139..21086629	T(1;3)HA14		T/Tp breakpoint	cytology
19E2-19E5	X:20684139..20978999	Mi{FlpStop}shakB[MI15228-FlpStop.ND]		insertion	cytology
19E2-19E5	X:20684139..20978999	Mi{FlpStop}shakB[MI15228-FlpStop.D]		insertion	cytology
19E2-19E5	X:20684139..20978999	Mi{Trojan-GAL4.0}shakB[MI15228-TG4.0]		insertion	cytology
19E2-19E5	X:20684139..20978999	Mi{Trojan-GAL4.2}shakB[MI02168-TG4.2]		insertion	cytology
19E2--19E4	X:20684139..20921597	Df(1)M176		deleted segment	cytology
19E2-19E3	X:20684139..20842444	ms(1)19E		gene	cytology
19E2-19E3	X:20684139..20842444	l(1)19Eg		gene	cytology
19E2--19E3	X:20706911..20791278	Dp(1;3)DC088	FBst0030252	duplicated segment	sequence
19E2-19E5,19E3-19E3,19E3-19E3	X:20761071..20927050	shakB	65 stocks	gene	sequence
19E3--19E4	X:20763524..20852236	Dp(1;3)DC090	FBst0030253	duplicated segment	sequence
19E3	X:20768822..20768822	PBac{WH}f07844		insertion	sequence
19E3-19E3	X:20780150..20781220	CG32507		gene	sequence
19E3-19E3	X:20785443..20785443	P{EP}shakB[G18800]	FBst1023693	insertion	sequence
19E3	X:20789685..20789685	Mi{MIC}shakB[MI15228]	FBst0060999	insertion	sequence
19E3	X:20791929..20791929	PBac{WH}shakB[f07836]		insertion	sequence
19E3	X:20793130..20793130	PBac{WH}shakB[f00199]	FBst0018302	insertion	sequence
19E3	X:20800870..20800870	Mi{ET1}shakB[MB03735]		insertion	sequence
19E3	X:20801993..20801993	PBac{WH}shakB[f02313]		insertion	sequence
19E3--19E4	X:20821893..20905918	Dp(1;3)DC092	FBst0030254	duplicated segment	sequence
19E3-19E3	X:20822146..20825641	CG15450	8 stocks	gene	sequence
19E3	X:20825513..20825513	Mi{MIC}shakB[MI06141]	FBst0042373	insertion	sequence
19E3_r6	X:20825971..20825971	Mi{PT-GFSTF.2}shakB[MI02168-GFSTF.2]	FBst0060524	insertion	sequence
19E3	X:20825971..20825971	Mi{MIC}shakB[MI02168]	FBst0034285	insertion	sequence
19E4-95D	X:20842445..24063100	T(1;3)KA12		T/Tp breakpoint	cytology
19E4--20E	X:20842445..22835497	Df(1)LB7		deleted segment	cytology
19E4--20E	X:20842445..22835497	Df(1)17-489	2 stocks	deleted segment	cytology
19E4--20E	X:20842445..22835497	Df(1)C5		deleted segment	cytology
19E4--20A3	X:20842445..21582401	Df(1)26B		deleted segment	cytology
19E4--19F19	X:20842445..21377455	Df(1)Q38		deleted segment	cytology
19E4--19F6	X:20842445..21377455	Df(1)T106		deleted segment	cytology
19E4--19F6	X:20842445..21377455	Df(1)17-351	2 stocks	deleted segment	cytology
19E4--19F2	X:20842445..21266461	Df(1)B255		deleted segment	cytology
19E4--19E8	X:20842445..21086629	Df(1)A118	2 stocks	deleted segment	cytology
19E4--19E7	X:20842445..21081024	Df(1)HC279	2 stocks	deleted segment	cytology
19E4-19E4	X:20842445..20921597	CG32509		gene	cytology
19E4--2A	X:20842445..20921597	Df(1)tLB7		deleted segment	cytology
19E4-19E4	X:20842445..20921597	CG11230		gene	cytology
19E4-19E4	X:20842445..20921597	CG11229		gene	cytology
19E4-19E4	X:20864813..20865731	lncRNA:CR43193		gene	sequence
19E4-19E4	X:20867989..20869397	CG1314	2 stocks	gene	sequence
19E4-19E4	X:20874941..20875303	CR11235		gene	sequence
19E4	X:20881130..20881130	Mi{MIC}shakB[MI02783]	FBst0037327	insertion	sequence
19E4-19E4	X:20881814..20882626	I-3	2 stocks	gene	sequence
19E4--19E5	X:20888939..20973245	Dp(1;3)DC410	FBst0030800	duplicated segment	sequence
19E4	X:20893536..20893581	PBac{WH}f07805		insertion	sequence
19E4	X:20910458..20910458	Mi{ET1}MB01026		insertion	sequence
19E4	X:20917568..20917667	PBac{RB}e02430		insertion	sequence