Cytology	Observed or estimated sequence coordinates	Symbol	Stocks	Feature type	Mapped by

1-20	X:103615..23108331	l(1)EH275a		gene	cytology
1-20	X:103615..23108331	ms(1)10		gene	cytology
1-20	X:103615..23108331	l(1)M86.4		gene	cytology
1-20	X:103615..23108331	l(1)U3		gene	cytology
1-20	X:103615..23108331	mei-99	FBst0004882	gene	cytology
1-20	X:103615..23108331	dh	FBst0001539	gene	cytology
1-20	X:103615..23108331	l(1)L25.7		gene	cytology
1-20	X:103615..23108331	l(1)M76.3		gene	cytology
1-20	X:103615..23108331	l(1)K84.3		gene	cytology
1-20	X:103615..23108331	l(1)Uc-1		gene	cytology
1-20	X:103615..23108331	l(1)BP		gene	cytology
1-20	X:103615..23108331	l(1)M95.1		gene	cytology
1-20	X:103615..23108331	l(1)5-39-1		gene	cytology
1-20	X:103615..23108331	ms(1)66		gene	cytology
1-20	X:103615..23108331	ms(1)294		gene	cytology
1-20	X:103615..23108331	l(1)K87.2		gene	cytology
1-20	X:103615..23108331	mei-269		gene	cytology
1-20	X:103615..23108331	ms(1)12		gene	cytology
1-20	X:103615..23108331	l(1)VA624		gene	cytology
1-20	X:103615..23108331	l(1)64	FBst0313556	gene	cytology
1-20	X:103615..23108331	c(1)a		gene	cytology
1-20	X:103615..23108331	l(1)14P11		gene	cytology
1-20	X:103615..23108331	mei-160	FBst0004878	gene	cytology
1A-56A	X:103615..19012906	T(1;2)SP18		T/Tp breakpoint	cytology
1A-10A	X:103615..11198803	In(1)T2		inversion breakpoint	cytology
1A-7D	X:103615..8246254	In(1)T1		inversion breakpoint	cytology
1A5-66C1	X:349644..8246397	T(1;3)JC56		T/Tp breakpoint	cytology
1B1-98C	X:408583..28383802	T(1;3)y[75r]		T/Tp breakpoint	cytology
1B1-98C	X:408583..28383802	T(1;3)y[67k5]		T/Tp breakpoint	cytology
1B1-60F4	X:408583..25101785	T(1;2)y[A76b37]		T/Tp breakpoint	cytology
1B1-20D	X:408583..22716656	In(1)y[A74e]		inversion breakpoint	cytology
1B1-20D	X:408583..22716656	In(1)y[A74b51]		inversion breakpoint	cytology
1B1-20A	X:408583..21675680	In(1)y[A79d2]		inversion breakpoint	cytology
1B1-20A	X:408583..21675680	In(1)y[A72d3]		inversion breakpoint	cytology
1B1-20A	X:408583..21675680	In(1)y[89d68]		inversion breakpoint	cytology
1B1-19E8	X:408583..21086629	In(1)y[88f86]		inversion breakpoint	cytology
1B-38E	X:408583..20812419	T(1;2)OR25		T/Tp breakpoint	cytology
1B1-18D2	X:408583..19573161	In(1)y[88c63]		inversion breakpoint	cytology
1B1-16D	X:408583..17841787	In(1)y[A79b21]		inversion breakpoint	cytology
1B1-36D	X:408583..17817472	T(1;2)y[260-13]		T/Tp breakpoint	cytology
1B1-16C8	X:408583..17761755	In(1)y[A76b94]		inversion breakpoint	cytology
1B1-49F	X:408583..13275886	T(1;2)y[R7]		T/Tp breakpoint	cytology
1B1-11E3	X:408583..13217908	In(1)y[85f2]		inversion breakpoint	cytology
1B1-87A	X:408583..12147054	T(1;3)y[R19]		T/Tp breakpoint	cytology
1B-10A	X:408583..11198803	In(1)GJ5		inversion breakpoint	cytology
1B1-9D	X:408583..10645358	In(1)y[A74c166]		inversion breakpoint	cytology
1B1-28B	X:408583..7644956	T(1;2)y[85f3]		T/Tp breakpoint	cytology
1B1-27C	X:408583..6969877	T(1;2)y[Ee11]		T/Tp breakpoint	cytology
1B-83F	X:408583..6625558	T(1;3)SP21		T/Tp breakpoint	cytology
1B4-71D	X:466699..15528103	T(1;3)sc[260-15]	2 stocks	T/Tp breakpoint	cytology
1B4-6D8	X:466699..6863445	In(1)sc[7]	9 stocks	inversion breakpoint	cytology
1B9-88A	X:529780..14226397	T(1;3)GA100		T/Tp breakpoint	cytology
1C-56C	X:660484..19329544	T(1;2)DEB5		T/Tp breakpoint	cytology
1C-10B	X:660484..11489173	In(1)65		inversion breakpoint	cytology
1D-46E	X:831097..10111219	T(1;2)OR39		T/Tp breakpoint	cytology
1D4-36C	X:962726..17552485	T(1;2)GF326		T/Tp breakpoint	cytology
1E-99A	X:991048..29468940	T(1;3)GA91	FBst0004636	T/Tp breakpoint	cytology
1E1-71C1	X:991048..15298777	T(1;3)N3		T/Tp breakpoint	cytology
1E4-58E	X:1185508..22584651	T(1;2)RC66		T/Tp breakpoint	cytology
1F-99F	X:1254810..30597427	T(1;3)Dem1-8		T/Tp breakpoint	cytology
1F-14A	X:1254810..16113516	In(1)C146		inversion breakpoint	cytology
2A-60D	X:1368553..24747488	T(1;2)OR6		T/Tp breakpoint	cytology
2B-57D	X:1475669..21378741	T(1;2)Su(bw[D])42		T/Tp breakpoint	cytology
2B5-20F	X:1660982..23108331	In(1)GA106		inversion breakpoint	cytology
2B5-20A	X:1660982..21675680	In(1)VE891		inversion breakpoint	cytology
2B5-54A	X:1660982..17227747	T(1;2)C123		T/Tp breakpoint	cytology
2B5-83E	X:1660982..6493156	T(1;3)GE222		T/Tp breakpoint	cytology
2B13--12B18	X:1860969..13757665	P{lacW}arm[G0268a]	FBst0314575	insertion	cytology
2C-97A10	X:1972107..26362804	T(1;3)slu		T/Tp breakpoint	cytology
2C3-7B1	X:2019122..7337287	In(1)HC207	2 stocks	inversion breakpoint	cytology
2D-14F	X:2083109..16667591	In(1)Mg96		inversion breakpoint	cytology
2D--12B6	X:2083109..13754475	Df(1)w71b		deleted segment	cytology
2D-7D1	X:2083109..7970075	In(1)sn[s-1-73]		inversion breakpoint	cytology
2D3-52F	X:2127280..16231534	T(1;2)KC16		T/Tp breakpoint	cytology
2D3-49A	X:2127280..12530887	T(1;2)GA113		T/Tp breakpoint	cytology
2F-91A	X:2223442..18446794	T(1;3)29A2		T/Tp breakpoint	cytology
3A-97A	X:2328358..26362804	T(1;3)M155		T/Tp breakpoint	cytology
3A--11E	X:2328358..13346259	Dp(1;1)SM2		duplicated segment	cytology
3A2--8C1	X:2354343..9003206	Dp(1;1)Gr		duplicated segment	cytology
3A4-42A	X:2490289..6496635	T(1;2)S76		T/Tp breakpoint	cytology
3A5-55A	X:2555321..18013902	T(1;2)N4		T/Tp breakpoint	cytology
3A10--12A8	X:2658572..13623898	Df(1)w70j		deleted segment	cytology
3B1-20F	X:2666235..23108331	In(1)GE257		inversion breakpoint	cytology
3B-39E	X:2666235..21684084	T(1;2)OR28		T/Tp breakpoint	cytology
3B1-20A	X:2666235..21675680	In(1)GE228		inversion breakpoint	cytology
3B1-12F2	X:2666235..14718166	In(1)62b12		inversion breakpoint	cytology
3B5--12A10	X:2753186..13646537	Df(1)w70e		deleted segment	cytology
3C1-98D	X:2804156..28644088	T(1;3)ZWD9		T/Tp breakpoint	cytology
3C-97F	X:2804156..27434247	T(1;3)OR37		T/Tp breakpoint	cytology
3C-20F	X:2804156..23108331	In(1)w[is]		inversion breakpoint	cytology
3C1-39E2	X:2804156..21592349	T(1;2)w[70k18.1]		T/Tp breakpoint	cytology
3C-57B	X:2804156..21107330	T(1;2)Ee4		T/Tp breakpoint	cytology
3C-38E	X:2804156..20812419	T(1;2)OR84		T/Tp breakpoint	cytology
3C-37C	X:2804156..19217604	T(1;2)OR17		T/Tp breakpoint	cytology
3C--12B10	X:2804156..13757665	Df(1)LCD		deleted segment	cytology
3C-67F	X:2804156..10949869	T(1;3)Dem1-5		T/Tp breakpoint	cytology
3C-28C	X:2804156..7820556	T(1;2)SP64		T/Tp breakpoint	cytology
3C1--6F6	X:2804156..7116431	Dp(1;1)Bt		duplicated segment	cytology
3C-84A	X:2804156..6896977	T(1;3)z[+]9		T/Tp breakpoint	cytology
3C2-20C	X:2845023..22597814	In(1)w[77d]		inversion breakpoint	cytology
3C2-20B	X:2845023..22371346	In(1)w83c19		inversion breakpoint	cytology
3C2-20B	X:2845023..22371346	In(1)w88f83		inversion breakpoint	cytology
3C2-19E	X:2845023..21086629	In(1)w88c87		inversion breakpoint	cytology
3C2-19E4	X:2845023..20921597	In(1)w[89e52]		inversion breakpoint	cytology
3C2-92C2	X:2845023..20037706	T(1;3)w[88c34b]		T/Tp breakpoint	cytology
3C2-18F	X:2845023..19887081	In(1)w[EM20]		inversion breakpoint	cytology
3C2-18E	X:2845023..19747669	In(1)w[81f3]		inversion breakpoint	cytology
3C2-18C	X:2845023..19555536	In(1)w8631-1A		inversion breakpoint	cytology
3C2-91E	X:2845023..19070332	T(1;3)w[78h]		T/Tp breakpoint	cytology
3C2-17D	X:2845023..18803707	In(1)w[89e12]		inversion breakpoint	cytology
3C2-16D	X:2845023..17841787	In(1)w79b3		inversion breakpoint	cytology
3C2-54E	X:2845023..17811908	T(1;2)w[Ee10]		T/Tp breakpoint	cytology
3C2-70C	X:2845023..14047681	T(1;2)w[Ee11]		T/Tp breakpoint	cytology
3C2-87F	X:2845023..13843302	T(1;3)w[81k11]		T/Tp breakpoint	cytology
3C2-12B9	X:2845023..13755214	In(1)z[+64b9]		inversion breakpoint	cytology
3C2-9A2	X:2845023..9871237	In(1)w88c60		inversion breakpoint	cytology
3C2-8F	X:2845023..9709556	In(1)w72b		inversion breakpoint	cytology
3C2-7E	X:2845023..8465638	In(1)w[79b7]		inversion breakpoint	cytology
3C2-65E5	X:2845023..7156841	T(1;3)w[85e1]		T/Tp breakpoint	cytology
3C2-65B	X:2845023..6608375	T(1;3)w[74c]		T/Tp breakpoint	cytology
3C3-20D2	X:2907915..22716656	In(1)w[m54l]		inversion breakpoint	cytology
3C4--6A4	X:2970808..6516900	Dp(1;1)L73.7		duplicated segment	cytology
3C5-20A	X:2976542..21675680	In(1)C171		inversion breakpoint	cytology
3C7-19E	X:3102328..21086629	In(1)N[8d5]		inversion breakpoint	cytology
3C7-38B	X:3102328..20098210	T(1;2)N[Uc1.26]		T/Tp breakpoint	cytology
3C7-14B	X:3102328..16363596	In(1)N[298]		inversion breakpoint	cytology
3C7-8E	X:3102328..9600460	In(1)N[P]		inversion breakpoint	cytology
3C7-27E	X:3102328..7277616	T(1;2)HF326		T/Tp breakpoint	cytology
3C7-6A	X:3102328..6516900	In(1)N[22j4]		inversion breakpoint	cytology
3C11--7B3	X:3255075..7557502	Dp(1;1)A10.3		duplicated segment	cytology
3D-67A	X:3312266..9333837	T(1;2)Dem1-6		T/Tp breakpoint	cytology
3F-71E	X:3765078..15674313	T(1;3)OR66		T/Tp breakpoint	cytology
3F-84E	X:3765078..8130321	T(1;3)M159		T/Tp breakpoint	cytology
4-17B	X:3955447..18502714	In(1)SMG3		inversion breakpoint	cytology
4A-14D	X:3955447..16520529	In(1)Dem1-1		inversion breakpoint	cytology
4-9	X:3955447..10976635	In(1)M3		inversion breakpoint	cytology
4B-88A	X:4115669..14226397	T(1;3)OR60	6 stocks	T/Tp breakpoint	cytology
4B-7A	X:4115669..7286017	In(1)IC		inversion breakpoint	cytology
4B4-7B3	X:4234786..7557502	In(1)ct[43aH1]		inversion breakpoint	cytology
4C-73C	X:4333244..16805146	T(1;3)OR67		T/Tp breakpoint	cytology
4C-42C	X:4333244..6776962	T(1;2)SP84		T/Tp breakpoint	cytology
4C6-71B	X:4517999..15216220	T(1;3)bi[Qd-1E4]		T/Tp breakpoint	cytology
4C12--8F10	X:4668106..9709556	Dp(1;1)J2.1		duplicated segment	cytology
4D-17B	X:4749024..18502714	In(1)St-D		inversion breakpoint	cytology
4D-12E	X:4749024..14510750	In(1)Dem1-2		inversion breakpoint	cytology
4D-87F	X:4749024..13843302	T(1;3)OR6		T/Tp breakpoint	cytology
4D-9A	X:4749024..10055610	In(1)U7.4cm1		inversion breakpoint	cytology
4D-6F	X:4749024..7150636	In(1)U7.6.1		inversion breakpoint	cytology
4D-6F	X:4749024..7150636	In(1)U7.9		inversion breakpoint	cytology
4E-20F	X:4964040..23108331	In(1)l-v132		inversion breakpoint	cytology
4E2--6F2	X:5027641..7071415	Dp(1;1)4E-6F		duplicated segment	cytology
5A-16E	X:5475817..17883261	In(1)IW1		inversion breakpoint	cytology
5A-7B3	X:5475817..7557502	In(1)ct[J13]		inversion breakpoint	cytology
5A--7A	X:5475817..7286017	Dp(1;2;1)AT	2 stocks	duplicated segment	cytology
5A-6F5	X:5475817..7114904	In(1)Sxl[+fPb-11]		inversion breakpoint	cytology
5B-19D	X:5697153..20604985	In(1)89e80		inversion breakpoint	cytology
5B-35C	X:5697153..15271253	T(1;2)5B;35C		T/Tp breakpoint	cytology
5B-11A7	X:5697153..12294293	In(1)V7-12		inversion breakpoint	cytology
5C-12C1	X:5766003..13767270	In(1)rdgB5		inversion breakpoint	cytology
5C-8F	X:5766003..9709556	In(1)Mg83		inversion breakpoint	cytology
5C3--6C12	X:5848082..6533999	Df(1)dx81	2 stocks	deleted segment	sequence
5C9--6A4	X:5930483..6516900	Dp(1;1)A8.3		duplicated segment	cytology
5C9--6A4	X:5930483..6516900	Df(1)A8.3		deleted segment	cytology
5D1-15A1	X:5955321..16701269	In(1)r[hd1-4]		inversion breakpoint	cytology
5D-6E	X:5955321..7033898	fs(1)K741	2 stocks	gene	cytology
5E-12D	X:6198962..14080987	In(1)T3		inversion breakpoint	cytology
5E-10C	X:6198962..11607195	In(1)IW2		inversion breakpoint	cytology
5E--7A	X:6198962..7286017	Dp(1;1)hdp-b[rv]		duplicated segment	cytology
5E8-6D1	X:6305232..6788583	l(1)5Da		gene	cytology
5F1--6A1	X:6326277..6413995	Dp(1;3)DC155		duplicated segment	sequence
5F2--6B2	X:6344333..6516952	Df(1)Exel6239	FBst0007713	deleted segment	sequence
5F4--6A2	X:6372119..6456655	Dp(1;3)DC156	FBst0030294	duplicated segment	sequence
6A1-19E8	X:6400666..21086629	In(1)RF19	2 stocks	inversion breakpoint	cytology
6A--8A	X:6400666..8768350	Dp(1;1)GH65		duplicated segment	cytology
6A-6B	X:6400666..6585390	P{wH}4		insertion	cytology
6A-6A	X:6400666..6516900	P{CaSpeR}C19.1a		insertion	cytology
6A-6A	X:6400666..6516900	P{enE}6b		insertion	cytology
6A-6A	X:6400666..6516900	P{Tub84B-lacZ.NLS.R2}1	FBst0029725	insertion	cytology
6A1-6A2;7C;9A1-9A3;19C6	X:6400666..6441660	In(1)A99		inversion breakpoint	cytology
6A1-6A2-7C6-7C7	X:6400666..6441660	In(1)JC107		inversion breakpoint	cytology
6A-9A-9B	X:6400666..6441660	In(1)K2		inversion breakpoint	cytology
6A-59F5-59F8	X:6400666..6441660	T(1;2)Pin[R7-1]		T/Tp breakpoint	cytology
6A1-6B1;6F1-6F2;7C1-7C2;19A1-19A4	X:6400666..6441660	In(1)ct[78]		inversion breakpoint	cytology
6A1-6A1	X:6418760..6419434	CG33668		gene	sequence
6A1-6B1	X:6423123..6524323	CG42340	6 stocks	gene	sequence
6A1--6B2	X:6433202..6540637	Dp(1;3)DC157	FBst0030295	duplicated segment	sequence
6A2-6A3-38F	X:6441661..6482655	T(1;2)V9-2		T/Tp breakpoint	cytology
6A2-6A2	X:6441661..6482655	PBac{WH}CG42340[f00393]		insertion	cytology
6A2-6A2	X:6471673..6472378	CG33667		gene	sequence
6A2	X:6472724..6472724	PBac{WH}CG42340[f02918]		insertion	sequence
6A2-6A2	X:6476243..6476967	CG33666	FBst0481720	gene	sequence
6A2-6A2	X:6478138..6478849	CG33665	FBst0469496	gene	sequence
6A3-6E5	X:6482656..7033878	scp	2 stocks	gene	cytology
6A3	X:6499346..6499346	Mi{MIC}CG42340[MI15187]	FBst0059746	insertion	sequence
6A4	X:6515805..6515805	PBac{WH}CG42340[f03671]		insertion	sequence
6B-90E	X:6516901..18118267	T(1;3)M150		T/Tp breakpoint	cytology
6B-40	X:6516901..6585390	T(1;2)OR23		T/Tp breakpoint	cytology
6B-6B	X:6516901..6585390	P{enF}16A		insertion	cytology
6B-40	X:6516901..6585390	T(1;2)SP106		T/Tp breakpoint	cytology
6B-6F-75C	X:6516901..6537974	T(1;3)OR39		T/Tp breakpoint	cytology
6B-17C1-17C7	X:6516901..6537974	In(1)H24i		inversion breakpoint	cytology
6B1-6C1-86D3-86D10	X:6516901..6537974	T(1;3)cu[100.69]		T/Tp breakpoint	cytology
6B1-6B1	X:6516974..6517046	tRNA:Phe-GAA-1-1		gene	sequence
6B1--6C1	X:6519417..6592695	Dp(1;3)DC158	FBst0030296	duplicated segment	sequence
6B1-6B1	X:6524293..6524464	P{GawB}NP4079	FBst0303459	insertion	sequence
6B1-6B1	X:6524464..6526342	CG3918	5 stocks	gene	sequence
6B1	X:6524500..6524597	P{XP}CG3918[d02940]	FBst0019185	insertion	sequence
6B1-6B1	X:6524533..6524533	P{Adh-lacZ.mut.Adh-lacZ.wt.loxP.FRT}X34		insertion	sequence
6B1-6B1	X:6526106..6527888	CG3342	7 stocks	gene	sequence
6B1-6B1	X:6526267..6527806	Df(1)CRIMIC-CR70598	FBst0098559	deleted segment	sequence
6B1	X:6527836..6527836	PBac{WH}CG3342[f02379]	FBst0018549	insertion	sequence
6B1-6B1,6A-6B	X:6528948..6530726	Agxt	6 stocks	gene	sequence
6B1-6B1,6A-6B,6A-6B	X:6530897..6533348	RpL7A	5 stocks	gene	sequence
6B1-6B1	X:6531635..6531747	snoRNA:CD18		gene	sequence
6B1	X:6533607..6533607	PBac{RB}RpL7A[e02336]	FBst0018043	insertion	sequence
6B1-6B2,6A-6A,6A-6A	X:6533999..6538575	dx	13 stocks	gene	sequence
6B1-6B1	X:6534117..6534117	P{EP}dx[Δ64]		insertion	sequence
6B2-6C1	X:6537975..6614449	P+PBac{XP3.WH3}CG34417[1]	FBst0039616	insertion	cytology
6B2-6B3	X:6537975..6576170	vs	4 stocks	gene	cytology
6B2-6B3-15E7-15F2	X:6537975..6559048	In(1)dta		inversion breakpoint	cytology
6B2	X:6538321..6538321	Mi{MIC}dx[MI13820]		insertion	sequence
6B2	X:6540711..6540711	P{EPgy2}EY07268	FBst0017378	insertion	sequence
6B2-6C1	X:6540771..6589173	CG34417	13 stocks	gene	sequence
6B2--6C4	X:6543963..6669857	Df(1)Exel6240	FBst0007714	deleted segment	sequence
6B2	X:6543963..6543963	P{XP}CG34417[d01329]		insertion	sequence
6B2-6B2	X:6545126..6545177	P{Mae-UAS.6.11}GG01546[GG01546]		insertion	sequence
6B1	X:6545990..6545990	P{SUPor-P}CG34417[KG02817]		insertion	sequence
6B2-6B2	X:6545997..6545997	P{EP}CG34417[G11334]	FBst1023460	insertion	sequence
6B2,6B2_r6	X:6546031..6546032	P{XP}CG34417[d02291]		insertion	sequence
6B2	X:6546116..6546116	P{XP}CG34417[d03423]		insertion	sequence
6B2	X:6546762..6546779	PBac{WH}CG34417[f05324]		insertion	sequence
6B2	X:6547795..6547795	PBac{RB}CG34417[e03348]		insertion	sequence
6B2-6B2	X:6549755..6549755	P{EP}CG34417[EP1377]		insertion	sequence
6B2	X:6549962..6549962	P{XP}CG34417[d05978]		insertion	sequence
6B2-6B2	X:6551051..6551051	P{EP}CG34417[G1806]	FBst1022847	insertion	sequence
6B2	X:6551123..6551123	PBac{WH}CG34417[f07824]		insertion	sequence