FB2025_01 , released February 20, 2025
Transcript: Dmel\Pfrx-RI
Open Close
General Information
Symbol
Dmel\Pfrx-RI
Species
D. melanogaster
Annotation Symbol
CG3400-RI
FlyBase ID
FBtr0074715
Feature type
mRNA
Associated gene
Dmel\Pfrx
Evidence Rank
Length (nt)
2978
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 60 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TTGTTTTTAGTTTCGCTCCACTCTGCCTTCTGTATTCATCGGGTGCATTTATTGTTATCGGTTTCTCTTCCAGCAAAGTC
GGTAATCGCTGCGTGTGCCTCGATTCGTAAACGCAGAAGGAACAGCTGATCAGCCCCAAAAATCACAGAGAGAAGGCGAA
GTGAAAGGAGCATCATCAGAAGCCCAACGAACAAAAGCAAACCCAAACCAGATACTTTCAGCCAGCAACAGCAGCTCAAT
CGACGAGCAAGACGAGGATCAAGTAGGAACATTGCCATTGCCCCTGCTGTCCATCAATAGAAGGACACCCACCCTGCTCC
CCCGCCCCGTTCCACCATCATCGACCCGATTCACATCGTCCTACAACGACGACCTGTGCACGTGCAGCAACTGCGCGTAC
TCCAGTTTCTCATCCTCCTCCTCCTCCGCCTCGTCCACATCCTCGTCATCCACGAGCGCTACAGCAGCAGGAACAGCATT
AGCATCAGCAGCCGCATCCGCCGTTGCCAAGAAGCTAGCACGCTCCGTGACCGCCACCAGCATCATGGACATGCCGTACA
ACACCTCGCCGTCGCTACGCGTGCGCACCACCTCGCTGAATCAGCTGAAGAAGACCGCCGACCTGGCCATCGAGAATGAG
CTGCACGTCTGTCCGTCGGTGATGTCCGAGGAGCTGCGCAAGCTGCTGCCGCCCACCTCGGAGACCGTGATGACCAAACC
CTTCCCCATCCGGGGCGAACGGACCATTGCCGACTGTACCACGCCGCATGTGATCGCCATGGTTGGCCTGCCGGCGCGCG
GCAAGACCTTTATCTCCAAGAAGCTAGCGCGCTACCTCAACTGGATCGGAATCTCCACGCGTGTTTTCAATCTGGGCGAG
TACAGGCGTCATGCAACCACAGCATACAAGTCGCACGAGTTCTTCCGCGCCGACAACGAGGAGGCGATGGCCATCCGCAA
CCGGTGCGCCAATCAGGCGCTGCACGACTCGTGCGATTGGCTGCTGAGCGGCCAGGGAAGCATCGCCGTGTTCGATGCTA
CCAACTCTACGCGCGACCGTCGCCAGCTGATCCACGACATTGTCGTGAAGCAGCATGGTTTCCGCCTGTTCTTCGTCGAG
TCCATTTGCGACGATCCGCAGATTATCGAGCAGAATATTCTGGAGGTAAAGGTCAGCTCACCAGATTACCTTAACATGAA
CACGGAGCTGGTGGTGCGGGACTTCCTGCAGCGCATCGAGCACTACGAAGAGCGCTACCAGCCCATCGACGAGGTTACCG
AGTCGCACCTCAGCTTCATGAAGGTGTACAACGCCGGCAAGAAGGTGGTCGTCTACAATAACGAGGGTCACGTGGAGTCG
CGCATTGTCTACTACCTGATGAACATCCACATTACGCCGCGCACCATCTACCTGACGCGTCACGGCGAGAGCGAGTACAA
CCTGAGCGGGCTCATCGGCGGCGACTCGAACCTGAGCGCCCGTGGCCACCAGTATGCCAATGCGCTATCCACTTTCATCG
CCCAGCAGCAGATCGACGGTCTGCGCGTGTGGACGTCATGGATGAAGCGTGCCATTCAGACGGTGGCCGATGTGAAGGCG
CCGCAGGAGCGCTGGAAGGCGTTAAACGAGATCGATGCCGGTCATTGCGAGGAAATGACGTACGAGCAAATCAAGGAGAA
GTTCCCCGAGGAATTCAAGGCTCGCGACGTTAACAAGTTCGCCTATCGCTATCCGCGCGGCGAGAGCTACGAGGATCTTG
TGGCTCGACTGGAGCCGGTCATCATGGAGCTGGAGCGACAGGGCAATGTGCTGGTTGTTTCGCACCAGGCGGTGCTGCGC
TGCCTCTTTGCCTACTTCCTGGACAAGTCCGCCGACGAGCTGCCCTACCTGTATGTGCCGCTGCACACGGTCATCAAGCT
GACGCCGGTGGCCTACGGCTGCAAGGTGGAGCACATCAAGTTGCCCATCGATGCGGTGGACACGCATCGTCCCAAGCCTA
AGATTCCCGGCGACGTCAGTGAGCCAGGACTGGATGGCCTCAGCGGCGAGCTGGTGGCACCCGATGGCGTCGGCAAGGTG
CTCATTGTGGGTGACGATGTGGCGACGGCCACGAACGGCAATGGCGGGCGCGTCGATGTCCAGGCGCACCAATGACGGCG
TCGCCTGCACCCCGTGCATCCACATCCACCTCCGAAATCCAAGACAATCTAAGCACGGCTGCTGGAACGGCTACGGCTGC
CCCAACCTCCAAGACACTTGCCCGCCAACCCCGCCCCCCCAAATCCCAGAACAGATCCCGCACTAATTCTTCCCCCAGCG
CATCCCGGACAGCCCAACTGAAACGGACAAAGACACGGACGTGGTCATGCGAGGGCAACACTGACAACTGCTCCTGCACC
TGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCT
GTTTTATTATGTACTTTAATGAACGATTAAATATTTTTAAAATTTTCTAGAACATCTATATACTTTGATAAAAGCAAAAT
ACAGACTTAAACACCTATCTAGATTTACACAATACACACCTTCTCCTGTAAATGGAGAAGTCCTGGCTTGATTGATTCAA
TGTGATTAGTTACCCCTGGCTTCACATGCAGGCGGTTGGCATACCGCATGCTGAGTGCTCCAGCCACTAAAAACTTGATT
GATTCTAACGCTGTATACTTAAATGTGCTCTAATCTAATTCGTTGTCTATTTTTTATAACCGTTTTGAGCGAATTTTATA
GCTAAGCGAGAGGATAAACTCACGGATTCCATTTGCCAACTCTGTTTAACTGAAACCACTTGCCCGACACACTTTTTAGC
CTATGTATATGTTGCTTGTAAATGTATGTGTGGAATAAATATTGTAACTACAATACATAAATACTATTTCAAATAATCAA
CAATAAATACAATTTATC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Pfrx-RA
        FBtr0074714
        2981
        Pfrx-RB
        FBtr0074717
        3376
        Pfrx-RD
        FBtr0074719
        2983
        Pfrx-RE
        FBtr0074720
        3193
        Pfrx-RF
        FBtr0074713
        2912
        Pfrx-RG
        FBtr0074716
        2928
        Pfrx-RH
        FBtr0074718
        2980
        Pfrx-RJ
        FBtr0307192
        3061
        Pfrx-RK
        FBtr0307193
        3197
        Pfrx-RL
        FBtr0307194
        3383
        Pfrx-RM
        FBtr0339439
        3031
        Pfrx-RN
        FBtr0339440
        3373
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Pfrx-PI
        FBpp0074484
        536
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Pfrx-PA
        FBpp0074483
        536
        Pfrx-PB
        FBpp0074486
        716
        Pfrx-PD
        FBpp0074488
        536
        Pfrx-PE
        FBpp0074489
        536
        Pfrx-PF
        FBpp0074482
        536
        Pfrx-PG
        FBpp0074485
        716
        Pfrx-PH
        FBpp0074487
        536
        Pfrx-PJ
        FBpp0298021
        536
        Pfrx-PK
        FBpp0298022
        536
        Pfrx-PL
        FBpp0298023
        536
        Pfrx-PM
        FBpp0308526
        536
        Pfrx-PN
        FBpp0308527
        715
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG3400-RI
        (FlyBase, 1996-)
        Pfrx-RI
        (FlyBase, 1996-)
        Secondary FlyBase IDs
          References (2)