FB2025_01 , released February 20, 2025
Transcript: Dmel\CG42540-RF
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General Information
Symbol
Dmel\CG42540-RF
Species
D. melanogaster
Annotation Symbol
CG42540-RF
FlyBase ID
FBtr0301098
Feature type
mRNA
Associated gene
Dmel\CG42540
Evidence Rank
Length (nt)
2017
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 6 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTGTTCCTCGACTGGCCAGCGAGTGCGGTACGGTCATAGTTCAACATTGGGATTAAATATTGACTTGCGAACGGACAGG
ACATGGCGGCAATGAGTGCGGATATTGTGCCCATGGAACAAGTGAGCTCGATGGTCTCCAATGGCGGTGGCAGCGTGGCC
ATGCAGCGCGATGATGAGTACAGGAATCGGATCATGAAAATACGTAGACTTGGTCTTTTGCAAAGCATCAAAATATCGGA
CCGCACGGACAGCCTGTGGCAAGTGACTGCCACCAGCATGCAACAGCCACCACCTCAGCGGCACGGTCGACCTGCACCAC
AGCACCAACACAGCCAGCACAATCAGCACCACCAGCACCAGAACCAGTGGGCACTGCACCACCAGAACCACTTGAACCAA
ACACCGCGCTCCACCGGCAGGCAAACCATGCTGGGCAGCAACCATAGTAGCCAGCGGGAGACGAGCGTCTCGCCCCGCCG
TGTGGCACTCGACACCACCGCCTCGGGATCCACCACCGGATTCGGTTTCGATCGGGATACACAAGCAAAACATTCACATG
GATTTCTCTATTCGGACGAGGAAATCAGCGATAAGGCATCAACATGCGGAAAATTGCTAATATTTCTTTCCGTGGCTCTT
GTGATAATGACGCTACCCTTCAGTCTCTTTGTTTGCTTTAAGGTGGTGCAGGAGTACGAGCGCGCGGTTATCTTCCGTTT
GGGTCGTCTTATGCAGGGCGGTGCCAAGGGCCCAGGTATCTTCTTCATCCTGCCCTGCATTGACTCCTATGCCCGTGTGG
ACTTGCGTACTCGCACATACGATGTGCCACCGCAGGAGGTTCTCACAAAGGATAGCGTTACGGTTTCGGTGGATGCAGTG
GTTTACTATCGGGTATCAAATGCGACCGTCTCTATCGCGAACGTGGAGAATGCTCACCATTCGACCAGGCTACTGGCACA
GACTACTCTACGAAACACAATGGGAACTCGGCATTTGCATGAGATACTCAGCGAGCGTATGACGATTTCCGGCACAATGC
AGGTTCAACTCGACGAAGCCACCGATGCCTGGGGCATCAAAGTTGAACGTGTGGAAATCAAGGACGTGCGTCTGCCGGTG
CAACTGCAACGTGCCATGGCCGCGGAGGCAGAAGCCGCCCGGGAAGCCCGCGCCAAAGTCATCGCCGCCGAAGGAGAACA
GAAGGCGTCGAGGGCTCTTCGCGAGGCGTCCGAGGTGATTGGCGATTCGCCGGCTGCCCTCCAACTGCGCTACCTTCAGA
CACTCAACACCATATCTGCGGAGAAGAACTCGACGATTGTGTTCCCGCTGCCCATCGATTTAATAACATATTTCCTGAAG
ACCAACGAGGCCACAACGCAGCAAAATGCCCGAGCAGCTGCGGCAGCAATTGGCAACACACCGCCGCCATTGCAACTGGC
GCCGCAGCAGCAGATGGGGCAGCAGCAACAGCCGCAGTACCAACAGCCGCAGCAGCAGCAGCAGCAGTACCAACCGCAGC
AGCAACAACAGCAGCAGCAGCAACAGCCGCAGCAGCAAGATCAACTCTATCAACAGGGGCAGCAGATCTCATCAGCCATG
TAAATCAGCTTAAGATCACAAAAGTTTCGGCTTCGTCGACTCTAAAATGTCCTGCACAATGTTTGAAAAATATCCTGTTA
GCATAAAAATACATCAGGAATTTGTATCATATATGCATTTCCTTTAAAGAAATGCATATCCAAATATCGATAGGAAAAAG
TGTAACTGAACAGGCTTTTTTCTCCAGTCGAAAATATTGCTTCATTTTCAAAGGCTGGGCAACTCTGACGACCAACTTAA
AAATGTGTATCTCAAATCCCCATATCCCTTTCCCCTGAGATGCACATTTTGAGTTACTATCCTTTAGGAAATGCTGGAAA
GCTGGCTATGTAATTCTTGTTAGGGAATGTAATGTAATGCATTTTTCTGGGCTTTTTAAGCAGCAGCTCTAAATATAATT
GTGCAGAGCGTTTCAAC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        CG42540-RB
        FBtr0301096
        3219
        CG42540-RC
        FBtr0301097
        3863
        CG42540-RD
        FBtr0301095
        3766
        CG42540-RG
        FBtr0304988
        3802
        CG42540-RH
        FBtr0333583
        3851
        CG42540-RI
        FBtr0333584
        3899
        CG42540-RJ
        FBtr0333585
        4175
        CG42540-RK
        FBtr0344807
        3887
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        CG42540-PF
        FBpp0290320
        506
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        CG42540-PB
        FBpp0290318
        398
        CG42540-PC
        FBpp0290319
        397
        CG42540-PD
        FBpp0290317
        505
        CG42540-PG
        FBpp0293525
        517
        CG42540-PH
        FBpp0305760
        393
        CG42540-PI
        FBpp0305761
        409
        CG42540-PJ
        FBpp0305762
        501
        CG42540-PK
        FBpp0311132
        405
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        CG42540-RF
        Secondary FlyBase IDs
          References (0)