FB2025_01 , released February 20, 2025
Transcript: Dmel\CG42540-RI
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General Information
Symbol
Dmel\CG42540-RI
Species
D. melanogaster
Annotation Symbol
CG42540-RI
FlyBase ID
FBtr0333584
Feature type
Associated gene
Evidence Rank
Length (nt)
3899
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 33 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          GCAGTTTGTTGTTAGTGCTGAACGGCAGTGAACGGACAGCGCTTGTTGGTTGTTCGTCTCTCGCACACATAGGGCCCGAA
          AAAGTTGAGCTGCCGTTTTTCGAGGGAGTTTTGGCACATGTTTTGTTTCCGCAACAGCTTCTTTTCCACTCCGCTTCCCG
          ATAATATTGCATTTTTGAAAACTTCGCTTGTTTGCCCATTTGTGTGTGGGCTAAAACTACTGACCGAATCGAGTGCCAAG
          TGACCAGAAATACACAACACACACCCCAGTTCGCCATCACACTAGAGGGGCTAAGACAATCACACAAGACATCAACGGAA
          AGTGCAAAAACCTTAGATTAAACTTAGATCGACTGCCAAAACTCAGGCAGTCCATACAGCCACAAAAAGGACAGCAACCT
          ACGAATTTCTCAGTGTGTGACATCCAAATTCTATATTCTACAAAAAAGTCAATAAGCAAAAAACAACAACAACAGGTGTT
          TCAGCTTTATCTATTGTCAAAACCAAAGAGCCACAAAATAATTAAGCCCAACAGCGGCAATTAGCATTTGTCCATAATTG
          ATAAGCAGAAACTTTAATTTAGTGCGTGTCAATTTGAATAGTATCGTATCCTGCGTGCTGACTGTGTGTGTGCGTGTGTG
          TGCGAGTGCGTGAGCTAGTGTGTGTGTGTGTGATTGCGTGGGGGCTTGTATGTGTGTGGCTGCTGTGCTCGGCGCACGTG
          CAACGAAAGATGGTCGAGGAGTTCCTGGAGAAGTTGCCAGAAATCGACACACGCTACGAGGATATTGTGCCCATGGAACA
          AGTGAGCTCGATGGTCTCCAATGGCGGTGGCAGCGTGGCCATGCAGCGCGATGATGAGTACAGGAATCGGATCATGAAAA
          TACGTAGACTTGATACACAAGCAAAACATTCACATGGATTTCTCTATTCGGACGAGGAAATCAGCGATAAGGCATCAACA
          TGCGGAAAATTGCTAATATTTCTTTCCGTGGCTCTTGTGATAATGACGCTACCCTTCAGTCTCTTTGTTTGCTTTAAGGT
          GGTGCAGGAGTACGAGCGCGCGGTTATCTTCCGTTTGGGTCGTCTTATGCAGGGCGGTGCCAAGGGCCCAGGTATCTTCT
          TCATCCTGCCCTGCATTGACTCCTATGCCCGTGTGGACTTGCGTACTCGCACATACGATGTGCCACCGCAGGAGGTTCTC
          ACAAAGGATAGCGTTACGGTTTCGGTGGATGCAGTGGTTTACTATCGGGTATCAAATGCGACCGTCTCTATCGCGAACGT
          GGAGAATGCTCACCATTCGACCAGGCTACTGGCACAGACTACTCTACGAAACACAATGGGAACTCGGCATTTGCATGAGA
          TACTCAGCGAGCGTATGACGATTTCCGGCACAATGCAGGTTCAACTCGACGAAGCCACCGATGCCTGGGGCATCAAAGTT
          GAACGTGTGGAAATCAAGGACGTGCGTCTGCCGGTGCAACTGCAACGTGCCATGGCCGCGGAGGCAGAAGCCGCCCGGGA
          AGCCCGCGCCAAAGTCATCGCCGCCGAAGGAGAACAGAAGGCGTCGAGGGCTCTTCGCGAGGCGTCCGAGGTGATTGGCG
          ATTCGCCGGCTGCCCTCCAACTGCGCTACCTTCAGACACTCAACACCATATCTGCGGAGAAGAACTCGACGATTGTGTTC
          CCGCTGCCCATCGATTTAATAACATATTTCCTGAAGACCAACGAGGCCACAACGCAGCAAAATGCCCGAGCAGCTGCGGC
          AGCAATTGGCAACACACCGCCGCCATTGCAACTGGCGCCGCAGCAGCAGATGGGGCAGCAGCAACAGCCGCAGTACCAAC
          AGCCGCAGCAGCAGCAGCAGCAGTACCAACCGCAGCAGCAACAACAGCAGCAGCAGCAACAGCCGCAGCAGCAAGATCAA
          CTCTATCAACAGGGGCAGCAGATCTCATCAGCCATGTAAATCAGCTTAAGATCACAAAAGTTTCGGCTTCGTCGACTCTA
          AAATGTCCTGCACAATGTTTGAAAAATATCCTGTTAGCATAAAAATACATCAGGAATTTGTATCATATATGCATTTCCTT
          TAAAGAAATGCATATCCAAATATCGATAGGAAAAAGTGTAACTGAACAGGCTTTTTTCTCCAGTCGAAAATATTGCTTCA
          TTTTCAAAGGCTGGGCAACTCTGACGACCAACTTAAAAATGTGTATCTCAAATCCCCATATCCCTTTCCCCTGAGATGCA
          CATTTTGAGTTACTATCCTTTAGGAAATGCTGGAAAGCTGGCTATGTAATTCTTGTTAGGGAATGTAATGTAATGCATTT
          TTCTGGGCTTTTTAAGCAGCAGCTCTAAATATAATTGTGCAGAGCGTTTCAACAGAAAAACCCAAGAACAAAAAACAACC
          AACGGAAACAACGATTCAAAAGAATCAAAAATCTTAGTTCATAACACCGATAAGTGCGATTCGAATGCGTTAGTCGACTG
          CAGATCCTTCAAGAAAGAAACGAGGGATCTGAGGTCAAATAGATACAAAGATACAAACCTAGACTAGTTTCATACGAGGC
          GAAAATAGAGTTTAATATTTGTAGCTTTACGACCAGAGGATGCAATTCTAAATATTAAATGTAGGAACTAGCGGTGCAAC
          TCAAATTTAGCACACACAACACAAAAATCAAAGTAAAATACTTACTATTAAAATCATACCATATGATGTGCGGTCGTTCA
          GGTGAAAATTCTAAAACCAACCAGTTTTGAAAGTCTTGAATTGTGAAATTTGAAATAGTCAAAAATGGTTGGTTTGGTTT
          TGTCTTTTCACGAACTGAGCGAGCCACAGATTATTGTTTGTTTTTCTCTCAATATTCCACGAAGGTCCGTTTCCTTGCAT
          TCTAGTTAAGTGTTAGACCATTTTGTTACTTTAATTACGTATTTTATTAAAAATTTCTTTTTAATAATAAATTAATTAAC
          TGATCTAAGAAAACGGGCCGTCGTTGAACCAAAATATTCAATGAACTGTTGACAAAGGCGTTTTGTAATTGTTTATCCGT
          AAGATGGTTACCCTGTTAATTATGGATGAATCTGATTACTTAAAATATTGCTGTATACTTAGCTATGCAAATTTAACTTT
          AAGTCGTGATCAGGTTAGTTCGTATAAAATAGAGTTACTGTTGTTCAAAACCAATTAAAACTTTATAGGACTTTAATAAC
          TCTCATTATGAACAGTTGTACTCATATGGTACACTCCAACTAATACAACTGTTAATCTGTTTCCACTGGAGCTAATCCAG
          GCATCTAGAGGATTTTTTTTGATCATAGTGGGTTTAGATATCTATTAAAAATATCGATCAGTTTTAAAAGTTATCTGAAC
          CCACGCTAACAGATGAAATCAACTAGTCAGCAACGTTCGTAGGTCCAAAATACGAATGCCAAACAATAAATAAGAGTAAT
          ACGAATTTATTGTACATACAATAAACAAATAGAGCATTTAAGCCGTACAGAACTGTTTTACCAATTGACACCTTAATTAA
          TATTGCATATTCGTATCGGGTATACACCACACACAAACACATACACAGGATCGTAGAAGGTAGCCTCTCTCGAAGTAGAA
          TCCGTCTACTTGAATATGTCTGAAGTACGAAGAAGTCGACGAAAGAAATGCATCTTATGCTAGAATGTATTTGCAACACG
          AAAAAGTTTACTTTTTAGCGCACTTCATGGAATACGAAACGAGTTATTGATATAATAATATATATACATATGCAAGCATA
          ACGAACTACATATTATGTACAATTTTGCCTTTGAAAATTTTTAAACAGAAACGATTTCATTATCCACATACAATTAGATT
          TATGTGTAAAGGAACAATAAAATTTCTTCAACTTTTTTGGTATCCAAAAGAGCAAAAAC
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0301096
          3219
          FBtr0301097
          3863
          FBtr0301095
          3766
          FBtr0301098
          2017
          FBtr0304988
          3802
          FBtr0333583
          3851
          FBtr0333585
          4175
          FBtr0344807
          3887
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0305761
          409
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0290318
          398
          FBpp0290319
          397
          FBpp0290317
          505
          FBpp0290320
          506
          FBpp0293525
          517
          FBpp0305760
          393
          FBpp0305762
          501
          FBpp0311132
          405
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          CG42540-RI
          Secondary FlyBase IDs
            References (0)