FB2025_01 , released February 20, 2025
Transcript: Dmel\CG42540-RJ
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General Information
Symbol
Dmel\CG42540-RJ
Species
D. melanogaster
Annotation Symbol
CG42540-RJ
FlyBase ID
FBtr0333585
Feature type
Associated gene
Evidence Rank
Length (nt)
4175
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 33 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          GCAGTTTGTTGTTAGTGCTGAACGGCAGTGAACGGACAGCGCTTGTTGGTTGTTCGTCTCTCGCACACATAGGGCCCGAA
          AAAGTTGAGCTGCCGTTTTTCGAGGGAGTTTTGGCACATGTTTTGTTTCCGCAACAGCTTCTTTTCCACTCCGCTTCCCG
          ATAATATTGCATTTTTGAAAACTTCGCTTGTTTGCCCATTTGTGTGTGGGCTAAAACTACTGACCGAATCGAGTGCCAAG
          TGACCAGAAATACACAACACACACCCCAGTTCGCCATCACACTAGAGGGGCTAAGACAATCACACAAGACATCAACGGAA
          AGTGCAAAAACCTTAGATTAAACTTAGATCGACTGCCAAAACTCAGGCAGTCCATACAGCCACAAAAAGGACAGCAACCT
          ACGAATTTCTCAGTGTGTGACATCCAAATTCTATATTCTACAAAAAAGTCAATAAGCAAAAAACAACAACAACAGGTGTT
          TCAGCTTTATCTATTGTCAAAACCAAAGAGCCACAAAATAATTAAGCCCAACAGCGGCAATTAGCATTTGTCCATAATTG
          ATAAGCAGAAACTTTAATTTAGTGCGTGTCAATTTGAATAGTATCGTATCCTGCGTGCTGACTGTGTGTGTGCGTGTGTG
          TGCGAGTGCGTGAGCTAGTGTGTGTGTGTGTGATTGCGTGGGGGCTTGTATGTGTGTGGCTGCTGTGCTCGGCGCACGTG
          CAACGAAAGATGGTCGAGGAGTTCCTGGAGAAGTTGCCAGAAATCGACACACGCTACGAGGATATTGTGCCCATGGAACA
          AGTGAGCTCGATGGTCTCCAATGGCGGTGGCAGCGTGGCCATGCAGCGCGATGATGAGTACAGGAATCGGATCATGAAAA
          GTCTTTTGCAAAGCATCAAAATATCGGACCGCACGGACAGCCTGTGGCAAGTGACTGCCACCAGCATGCAACAGCCACCA
          CCTCAGCGGCACGGTCGACCTGCACCACAGCACCAACACAGCCAGCACAATCAGCACCACCAGCACCAGAACCAGTGGGC
          ACTGCACCACCAGAACCACTTGAACCAAACACCGCGCTCCACCGGCAGGCAAACCATGCTGGGCAGCAACCATAGTAGCC
          AGCGGGAGACGAGCGTCTCGCCCCGCCGTGTGGCACTCGACACCACCGCCTCGGGATCCACCACCGGATTCGGTTTCGAT
          CGGGCGGACGAGGAAATCAGCGATAAGGCATCAACATGCGGAAAATTGCTAATATTTCTTTCCGTGGCTCTTGTGATAAT
          GACGCTACCCTTCAGTCTCTTTGTTTGCTTTAAGGTGGTGCAGGAGTACGAGCGCGCGGTTATCTTCCGTTTGGGTCGTC
          TTATGCAGGGCGGTGCCAAGGGCCCAGGTATCTTCTTCATCCTGCCCTGCATTGACTCCTATGCCCGTGTGGACTTGCGT
          ACTCGCACATACGATGTGCCACCGCAGGAGGTTCTCACAAAGGATAGCGTTACGGTTTCGGTGGATGCAGTGGTTTACTA
          TCGGGTATCAAATGCGACCGTCTCTATCGCGAACGTGGAGAATGCTCACCATTCGACCAGGCTACTGGCACAGACTACTC
          TACGAAACACAATGGGAACTCGGCATTTGCATGAGATACTCAGCGAGCGTATGACGATTTCCGGCACAATGCAGGTTCAA
          CTCGACGAAGCCACCGATGCCTGGGGCATCAAAGTTGAACGTGTGGAAATCAAGGACGTGCGTCTGCCGGTGCAACTGCA
          ACGTGCCATGGCCGCGGAGGCAGAAGCCGCCCGGGAAGCCCGCGCCAAAGTCATCGCCGCCGAAGGAGAACAGAAGGCGT
          CGAGGGCTCTTCGCGAGGCGTCCGAGGTGATTGGCGATTCGCCGGCTGCCCTCCAACTGCGCTACCTTCAGACACTCAAC
          ACCATATCTGCGGAGAAGAACTCGACGATTGTGTTCCCGCTGCCCATCGATTTAATAACATATTTCCTGAAGACCAACGA
          GGCCACAACGCAGCAAAATGCCCGAGCAGCTGCGGCAGCAATTGGCAACACACCGCCGCCATTGCAACTGGCGCCGCAGC
          AGCAGATGGGGCAGCAGCAACAGCCGCAGTACCAACAGCCGCAGCAGCAGCAGCAGCAGTACCAACCGCAGCAGCAACAA
          CAGCAGCAGCAGCAACAGCCGCAGCAGCAAGATCAACTCTATCAACAGGGGCAGCAGATCTCATCAGCCATGTAAATCAG
          CTTAAGATCACAAAAGTTTCGGCTTCGTCGACTCTAAAATGTCCTGCACAATGTTTGAAAAATATCCTGTTAGCATAAAA
          ATACATCAGGAATTTGTATCATATATGCATTTCCTTTAAAGAAATGCATATCCAAATATCGATAGGAAAAAGTGTAACTG
          AACAGGCTTTTTTCTCCAGTCGAAAATATTGCTTCATTTTCAAAGGCTGGGCAACTCTGACGACCAACTTAAAAATGTGT
          ATCTCAAATCCCCATATCCCTTTCCCCTGAGATGCACATTTTGAGTTACTATCCTTTAGGAAATGCTGGAAAGCTGGCTA
          TGTAATTCTTGTTAGGGAATGTAATGTAATGCATTTTTCTGGGCTTTTTAAGCAGCAGCTCTAAATATAATTGTGCAGAG
          CGTTTCAACAGAAAAACCCAAGAACAAAAAACAACCAACGGAAACAACGATTCAAAAGAATCAAAAATCTTAGTTCATAA
          CACCGATAAGTGCGATTCGAATGCGTTAGTCGACTGCAGATCCTTCAAGAAAGAAACGAGGGATCTGAGGTCAAATAGAT
          ACAAAGATACAAACCTAGACTAGTTTCATACGAGGCGAAAATAGAGTTTAATATTTGTAGCTTTACGACCAGAGGATGCA
          ATTCTAAATATTAAATGTAGGAACTAGCGGTGCAACTCAAATTTAGCACACACAACACAAAAATCAAAGTAAAATACTTA
          CTATTAAAATCATACCATATGATGTGCGGTCGTTCAGGTGAAAATTCTAAAACCAACCAGTTTTGAAAGTCTTGAATTGT
          GAAATTTGAAATAGTCAAAAATGGTTGGTTTGGTTTTGTCTTTTCACGAACTGAGCGAGCCACAGATTATTGTTTGTTTT
          TCTCTCAATATTCCACGAAGGTCCGTTTCCTTGCATTCTAGTTAAGTGTTAGACCATTTTGTTACTTTAATTACGTATTT
          TATTAAAAATTTCTTTTTAATAATAAATTAATTAACTGATCTAAGAAAACGGGCCGTCGTTGAACCAAAATATTCAATGA
          ACTGTTGACAAAGGCGTTTTGTAATTGTTTATCCGTAAGATGGTTACCCTGTTAATTATGGATGAATCTGATTACTTAAA
          ATATTGCTGTATACTTAGCTATGCAAATTTAACTTTAAGTCGTGATCAGGTTAGTTCGTATAAAATAGAGTTACTGTTGT
          TCAAAACCAATTAAAACTTTATAGGACTTTAATAACTCTCATTATGAACAGTTGTACTCATATGGTACACTCCAACTAAT
          ACAACTGTTAATCTGTTTCCACTGGAGCTAATCCAGGCATCTAGAGGATTTTTTTTGATCATAGTGGGTTTAGATATCTA
          TTAAAAATATCGATCAGTTTTAAAAGTTATCTGAACCCACGCTAACAGATGAAATCAACTAGTCAGCAACGTTCGTAGGT
          CCAAAATACGAATGCCAAACAATAAATAAGAGTAATACGAATTTATTGTACATACAATAAACAAATAGAGCATTTAAGCC
          GTACAGAACTGTTTTACCAATTGACACCTTAATTAATATTGCATATTCGTATCGGGTATACACCACACACAAACACATAC
          ACAGGATCGTAGAAGGTAGCCTCTCTCGAAGTAGAATCCGTCTACTTGAATATGTCTGAAGTACGAAGAAGTCGACGAAA
          GAAATGCATCTTATGCTAGAATGTATTTGCAACACGAAAAAGTTTACTTTTTAGCGCACTTCATGGAATACGAAACGAGT
          TATTGATATAATAATATATATACATATGCAAGCATAACGAACTACATATTATGTACAATTTTGCCTTTGAAAATTTTTAA
          ACAGAAACGATTTCATTATCCACATACAATTAGATTTATGTGTAAAGGAACAATAAAATTTCTTCAACTTTTTTGGTATC
          CAAAAGAGCAAAAAC
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0301096
          3219
          FBtr0301097
          3863
          FBtr0301095
          3766
          FBtr0301098
          2017
          FBtr0304988
          3802
          FBtr0333583
          3851
          FBtr0333584
          3899
          FBtr0344807
          3887
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0305762
          501
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0290318
          398
          FBpp0290319
          397
          FBpp0290317
          505
          FBpp0290320
          506
          FBpp0293525
          517
          FBpp0305760
          393
          FBpp0305761
          409
          FBpp0311132
          405
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          CG42540-RJ
          Secondary FlyBase IDs
            References (0)