Please see the JBrowse view of Dmel\lncRNA:CR45939 for information on other features
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Supported by strand-specific RNA-Seq and cDNA data.
Probable lncRNA gene; may encode small polypeptide(s).
Noncoding transcript of ftz-f1 gene may only exist in strains with the roo{}1043 transposon
RNA-seq exon junction data suggest that some transcripts may contain roo sequences.
Gene model reviewed during 6.02
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\lncRNA:CR45939 using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
JBrowse - Visual display of RNA-Seq signals
View Dmel\lncRNA:CR45939 in JBrowse3-45
3-41.9
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
New annotation (CR45939) in release 6.02 of the genome annotation.
Source for identity of: lncRNA:CR45939 CR45939
