A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{WH}CG7627f01338 Insertion

General Information
Symbol Dmel\PBac{WH}CG7627f01338 Species D. melanogaster
Name FlyBase ID FBti0041992
Feature type transposable_element_insertion_site
Description
Inserted element PBac{WH} Expression data
Affected gene(s) CG7627 Viability / fertility
Causes allele(s) CG7627f01338 Stock availability 2 publicly available
LINE ID f01338
Genomic Location
Chromosomal location 2L ( 29B1 ) Sequence location 2L:8,360,962..8,360,962 [+]
Map ( GBrowse ) detailed view FBti0145500 FBti0041853 FBti0143294 FBti0103027 FBti0041992 FBti0036977 FBti0103328 FBti0105417 FBti0106839 FBti0010921 FBti0028630 FBti0039999 FBti0104488 FBti0033470 FBti0104832 FBti0104074 FBti0105589 FBti0033765 FBti0011201 FBti0007657 FBti0105176 FBti0109864 FBti0037387 FBti0028496 FBti0106013 FBti0109554 FBti0028345 FBti0069650 FBti0011216 FBti0006391 FBti0067917 FBti0050360 FBti0033753 FBti0132316 FBti0003942 FBti0006568 FBti0102931 FBti0071022 FBti0045665 FBti0025183 FBti0124656_2 FBti0124656_1 FBti0025802 FBti0124657_1 FBti0124657_2 FBti0124658_1 FBti0124658_2 FBti0011045 FBti0053825 FBti0047521 FBti0028567 FBti0021682 FBti0011093 FBti0106534 FBti0057252 FBti0068900
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Description
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
2L
(Thibault, 2004, Thibault, 2004)
Sequence Location
2L:8,360,962..8,360,962 [+]
(Gene Disruption Project members and Exelixis, 2005)
Orientation
+
(Thibault, 2004, Thibault, 2004)
Cytological location
(computed by FlyBase)
29B1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
29B1 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
CZ483812
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct PBac{WH}
Location-dependent
role
deletion generation component
(Thibault et al., 2004)
mobile activating element
(Thibault et al., 2004)
carries FRT site(s)
(Thibault et al., 2004)
Size 7.234Kb
Associated alleles
gypsy\su(Hw)BR348
Scer\UAS14x.hs.XP.Scer\FRT
Scer\UAS14x.hs.XP
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG7627
(Gene Disruption Project members, 2001-, Mayer et al., 2009)
hide Alleles and Phenotypes
Causes alleles
CG7627f01338
(Bloomington Drosophila Stock Center, 2004.11.6, Mayer et al., 2009)
Lethality
References
viable
(Bloomington Drosophila Stock Center, 2004.11.6)
Sterility
References
fertile
(Bloomington Drosophila Stock Center, 2004.11.6)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
CG7627[f01338] mutant flies show little or no difference to wild-type in whole animal fluor content in small-molecular penetration assays.
(Mayer et al., 2009)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
f01338
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
18426
w1118; PBac{WH}CG7627f01338
Harvard
-
PBac{WH}CG7627f01338
hide Linkouts
hide Comments
Location 2L:8360962-8360963 confirmed by FlyBase alignment of dbGSS accession CZ483812 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
f01338
(Mayer et al., 2009)
PBac{WH}CG7627f01338
(FlyBase, 2005, FlyBase, 1992-)
PBac{WH}f01338
(Thibault, 2004, Thibault, 2004, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Mayer et al., 2009, J. Neurosci. 29(11): 3538--3550
Evolutionary conservation of vertebrate blood-brain barrier chemoprotective mechanisms in Drosophila. [FBrf0207483]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]