A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{SUPor-P}JYalphaKG09295 Insertion

General Information
Symbol Dmel\P{SUPor-P}JYalphaKG09295 Species D. melanogaster
Name FlyBase ID FBti0114966
Feature type transposable_element_insertion_site
Description
Inserted element P{SUPor-P} Expression data
Affected gene(s) JYalpha Viability / fertility fertile, viable
Causes allele(s) JYalphaKG09295 Stock availability 1 publicly available
LINE ID KG09295
Genomic Location
Chromosomal location 4 ( Het ) Sequence location
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Description
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
Orientation
Cytological location
(computed by FlyBase)
Cytological location
(reported)
Het (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-, Bellen, 2006.10.6)
Comments concerning
location
hide Sequence Data
Flanking sequence
CL528249
(Gene Disruption Project members, 2001-)
ED539156
(Bellen, 2006.10.6)
hide Inserted Element
Construct P{SUPor-P}
Location-dependent
role
Size 11.467Kb
Associated alleles
gypsy\su(Hw)BR430
wBR.E.BR
y+mDint2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
JYalpha
(FlyBase, 1992-)
hide Alleles and Phenotypes
Causes alleles
JYalphaKG09295
(Masly et al., 2006, FlyBase, 1996-)
Lethality
References
viable
(Gene Disruption Project members, 2001-, Bellen, 2006.10.6)
Sterility
References
fertile
(Gene Disruption Project members, 2001-, Bellen, 2006.10.6)
male sterile
(Masly et al., 2006)
hide Phenotype Manifest In
spermatozoon
(Masly et al., 2006)
hide Detailed Description
Statement
Reference
Homozygous males show sterility (as assayed by the degree of sperm motility).
(Masly et al., 2006)
JYalphaKG09295 results in hybrid sterility (as assayed by the degree of sperm motility) when heterozygous in males containing the D.simulans 4th chromosome introgressed into an otherwise D.melanogaster background.
(Masly et al., 2006)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
KG09295
(Gene Disruption Project members, 2001-, Bellen, 2006.10.6)
Origin as a multiple insertion line
N
(Bellen, 2006.10.6)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
16983
y1; P{SUPor-P}JYalphaKG09295
hide Linkouts
hide Comments
This insertion maps to a region of chromosome 4 that is not represented in Release 4 of the genomic sequence. The annotation CG17923 is incomplete; refer to AF202632 for the complete sequence.
(FlyBase, 1992-)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{SUPor-P}CG17923KG09295
(FlyBase, 1992-)
P{SUPor-P}JYalphaKG09295
(FlyBase, 1992-)
P{SUPor-P}KG09295
(FlyBase, 1992-, Bellen, 2006.10.6)
P{y+,w+}JYAlpha
(Masly et al., 2006)
Secondary FlyBase IDs
  • FBti0039053
  • FBti0075735
hide References ( 6 )
Research paper
Masly et al., 2006, Science 313(5792): 1448--1450
Gene transposition as a cause of hybrid sterility in Drosophila. [FBrf0192921]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Bellen, 2006.10.6, KG09205.xml
KG09205.xml [FBrf0191802]
FlyBase analysis
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]