FB2025_05 , released December 11, 2025
FB2025_05 , released December 11, 2025
CV Term Report
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General Information
Term gene ID (Ontology) SO:0000704 (Sequence Ontology)
Definition A region (or regions) that includes all of the sequence elements necessary to encode a functional transcript. A gene may include regulatory regions, transcribed regions and/or other functional sequence regions.
Also Known As "INSDC_feature:gene"
Comment
Links to External Ontologies
SO.org
Annotations
Records annotated with this term OR any of its CHILD TERMS
    Results list data from multiple species. Click on a button above and use the 'Filter by species' options on the resulting HitList to retrieve species-specific data.
Records annotated with this exact term (annotations to child terms are NOT included)
Data Class Field Records
Genes (FBgn)  FEATURE_TYPE   14800
Genes (FBgn)  SO_TERMS   15769
show Full annotation statements including this term (annotations to child terms are NOT included), and relevant FlyBase records
 Full annotation statements 
Relevant FlyBase reports
 Genes
 gene (all annotations which use CV term, excluding "NOT" statements)   32849
Spanning Tree (Parents/Children)
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  region
   |__biological_region
       |__gene  82800 rec.
           |__candidate_gene
           |   |__functional_candidate_gene
           |   |__positional_candidate_gene
           |__cryptic_gene
           |   |__cryptic_promoter
           |   |__cryptogene
           |__engineered_gene 5815 rec.
           |   |__engineered_foreign_gene(+) 5375 rec.
           |   |__engineered_fusion_gene 461 rec.
           |__epigenetically_modified_gene
           |   |__allelically_excluded_gene
           |   |__gene_rearranged_at_DNA_level
           |   |__maternally_imprinted_gene
           |   |__paternally_imprinted_gene
           |__foreign_gene 5375 rec.
           |   |__engineered_foreign_gene(+) 5375 rec.
           |__fusion_gene 461 rec.
           |   |__engineered_fusion_gene 461 rec.
           |__gene_cassette
           |__gene_component_region 51362 rec.
           |   |__gene_fragment
           |   |__gene_segment(+)
           |   |__intein_encoding_region
           |   |__non_transcribed_region
           |   |__promoter(+) 51362 rec.
           |__gene_with_non_canonical_start_codon 33 rec.
           |   |__gene_with_start_codon_CUG 12 rec.
           |__gene_with_polycistronic_transcript 445 rec.
           |   |__gene_with_dicistronic_transcript(+) 388 rec.
           |__gene_with_trans_spliced_transcript 26 rec.
           |__mt_gene 39 rec.
           |   |__kinetoplast_gene(+)
           |__ncRNA_gene 3633 rec.
           |   |__enzymatic_RNA_gene(+) 2 rec.
           |   |__gRNA_gene
           |   |__hpRNA_gene 10 rec.
           |   |__lncRNA_gene(+) 2503 rec.
           |   |__RNA_7SK_gene 2 rec.
           |   |__rRNA_gene(+) 158 rec.
           |   |__sbRNA_gene 1 rec.
           |   |__scRNA_gene
           |   |__sncRNA_gene(+) 895 rec.
           |   |__SRP_RNA_gene 2 rec.
           |   |__telomerase_RNA_gene
           |   |__vault_RNA_gene
           |   |__Y_RNA_gene
           |__negatively_autoregulated_gene
           |__nuclear_gene 18012 rec.
           |__nucleomorph_gene
           |__plasmid_gene
           |__plastid_gene
           |   |__apicoplast_gene
           |   |__chromoplast_gene
           |   |__ct_gene
           |   |__cyanelle_gene
           |   |__leucoplast_gene
           |   |__proplastid_gene
           |__positively_autoregulated_gene
           |__post_translationally_regulated_gene
           |__predicted_gene
           |__protein_coding_gene 14371 rec.
           |   |__gene_with_edited_transcript 810 rec.
           |   |__gene_with_mRNA_with_frameshift
           |   |__gene_with_polyadenylated_mRNA
           |   |__gene_with_recoded_mRNA(+) 410 rec.
           |__proviral_gene
           |   |__endogenous_retroviral_gene
           |__recombinationally_rearranged_gene
           |   |__recombinationally_inverted_gene
           |   |__recombinationally_rearranged_vertebrate_immune_system_gene
           |__rescue_gene
           |   |__wild_type_rescue_gene
           |__retrogene 142 rec.
           |__silenced_gene
           |   |__gene_silenced_by_DNA_modification(+)
           |   |__gene_silenced_by_histone_modification(+)
           |   |__gene_silenced_by_RNA_interference
           |__transgene
           |   |__floxed_gene
           |__translationally_regulated_gene
           |__transposable_element_gene 332 rec.
           |   |__engineered_foreign_transposable_element_gene
           |__vertebrate_immune_system_gene
               |__immunoglobulin_gene(+)
               |__T_cell_receptor_gene(+)
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Synonyms
  • "INSDC_feature:gene" EXACT
Secondary IDs
hide External Crossreferences & Linkouts
http://en.wikipedia.org/wiki/Gene "wiki"