FlyBase Aberration Report: Dmel\Df(3R)kar-D2

General Information

Symbol

Df(3R)kar-D2

Species

D. melanogaster

Name

FlyBase ID

FBab0002798

Feature type

chromosomal_deletion

Computed Breakpoints include

87A7;87D4-87D5

Features within 87A7--87D5

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

In(3R)AFA

Mutagen

X ray

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

Breakpoints

Causes alleles

Hsp70Ab^D2

(Caggese et al., 1979)

Carries alleles

Transposon Insertions

Formalized genetic data

Hsp70Aa << bk1 << l(3)R12 << bk2

Genetic mapping information

Comments

Comments on Cytology

Deletes the heat shock puff at 87C. Breakpoints are close to 87D3--87D4 and 87A4--87A5 although these bands are not deleted.

(Caggese et al., 1979)

Left limit of break 1 from non-inclusion of Hsp70Aa (citation unavailable) Limits of break 2 from polytene analysis (citation unavailable)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Desat2

(Coyne et al., 1999)

Hsp70Ab

(Caggese et al., 1979)

Hsp70Ba

(Caggese et al., 1979)

Hsp70Bb

(Caggese et al., 1979)

Hsp70Bc

(Caggese et al., 1979)

kar

(Caggese et al., 1979)

l(3)R12

(Caggese et al., 1979)

short-round

(Ghabrial et al., 2011)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Heterozygotes have significantly decreased levels of 7-monoenes in males, and of 7-monoenes and 7,11-dienes in females. The decrease in 7-unsaturated hydrocarbons is paralleled with an increase in linear saturated hydrocarbons.

(Labeur et al., 2002)

Homozygous embryos die before hatching and have a series of abnormal traits, including the almost complete absence of visible tracheae.

(Caggese et al., 1979)

Stocks (2)

Bloomington

6161

Df(3R)kar-D2, In(3R)AFA, e^AFA gustM^AFA/cu¹ kar¹ Sb¹

Kyoto

108657

Df(3R)kar-D2, In(3R)AFA, e^AFA gustM^AFA/cu¹ kar¹ Sb¹

Notes on Origin

Discoverer