FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Aberration: Dmel\Df(2R)PGRP-SCΔ
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General Information
Symbol
Df(2R)PGRP-SCΔ
Species
D. melanogaster
Name
FlyBase ID
FBab0047243
Feature type
chromosomal_deletion
Also Known As
PGRP-SCΔ
Computed Breakpoints include
Features within 44E2--44E2 (Estimated cytology)
Genomic Maps
Sequence coordinates
2R:8,709,499..8,709,499 (Df(2R)PGRP-SC[Delta]:bk1)
(Paredes et al., 2011)
2R:8,717,585..8,717,585 (Df(2R)PGRP-SC[Delta]:bk2)
(Paredes et al., 2011)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Mutagen
gene targeting by homologous recombination
(Paredes et al., 2011)
Class of aberration (relative to wild type)
chromosomal_deletion
(Paredes et al., 2011)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Paredes et al., 2011)
Breakpoints
Causes alleles
Carries alleles
Transposon Insertions
TI{TI}PGRP-SC-Δ
(Paredes et al., 2011)
Formalized genetic data
Genetic mapping information
Comments

Reported as 2R:4 ,597,004 in Release 5 coordinates.

(Paredes et al., 2011)

Reported as 2R:4 ,605,090 in Release 5 coordinates.

(Paredes et al., 2011)

Deletion of the PGRP-SC gene cluster (PGRP-SC1a, PGRP-SC1b, PGRP-SC2 and CG14743 are removed). A w+mW.hs marker which is flanked by loxP sites is inserted in place of the deleted sequence.

(Paredes et al., 2011)
Comments on Cytology
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
CG14743
(Paredes et al., 2011)
PGRP-SC1a
(Paredes et al., 2011)
PGRP-SC1b
(Paredes et al., 2011)
PGRP-SC2
(Paredes et al., 2011)
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (4)
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations

Df(2R)PGRP-SCΔ flies do not show a systemic response to oral infection with E. carotovora.

Df(2R)PGRP-SCΔ flies infected with E.carotovora show reductions in mean lifespan compared to wild-type.

(Paredes et al., 2011)
Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 
Synonyms and Secondary IDs (2)
Reported As
Symbol Synonym
Df(2R)PGRP-SCΔ
PGRP-SCΔ
(Cong et al., 2025, Bosco-Drayon et al., 2012)
Name Synonyms
Secondary FlyBase IDs
    References (3)