FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Clone: Dmel\AT29009
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General Information
Symbol
Dmel\AT29009
Species
D. melanogaster
Name
AT29009
FlyBase ID
FBcl0035835
Feature type
Computed gene(s)
 
Collection Status
BDGP
Known Problems
none
FlyBase assessment
    Library
    AT_cDNA
    • AT cDNA library of D. melanogaster, Oregon-R strain, adult male, testis and seminal vesicle.
    Strain
      Vector
      Tissue Source
      Stage
      Tissue/Position (including subcellular localization)
      Reference
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      4,748
      NCBI
      Full Length sequence dataSequence Downloader
      AAATGGGATCCGTGCTGGACACGATCTCTTCCACCGAAGAGGACCACCGCGTGGCCACTGTGACCGGATGGTCCACGGTG
      AACATCGCCAACTGCGCCGGCGTTTCCAATTCTTCAATTTTTGTGGCACTGAAGTGGGTGATGATGCCCATTAAGGTGGA
      GATATTCAACTTCAAGCGAAGTGGACCGGAAGATAATATGGCACGTGGACAATTTCTGTTGGACAACCTGTTAAGCGCAA
      ATCGCCTAAAACGCTTGCAAGAGGAAGTAGCAGTTATTAACACGTGCCAGAAAATCGAGGTGCGTGTCACACCCGGTCTG
      CCCAAATCGATGATGTGTGCCCAGATAACAGACGAATTTACAACTGCCATTCAGGAGGCCCTTAGATCACGCTATGAGGT
      GGATTCACGCACCTTAGATCTCTCCAGGTTCCACGCCAGTCCGGAGTTGTCTCTGCACTTTTGTCCGCTGCATATGGTCA
      AGCTGCTAGAAACAGTGCTAGTTCTTTCAAGCCATTTATTTCCCCATGTGACCAGCCTAGTACTGAGCAACAATTATTTG
      TGTTCCCTGAAAGCGTTTGCGGGAAATTCCCAAAGTTTTGCCAGCCTAGAGCGATTGGACATAAGCGCAAACAGGATTCA
      AGATTTGGGAGAACTCAATTACATCAACAAACTGAGTTGCAAGACGATCTTCTTGGCAGGAAACGGTTTGGCCAAGCTAA
      TCGTGGACGTCATTCGAAAAATGCTACCACAGTTGAAAAATGTTCATGGCTGTGTGCAGTTGGGGGAAAGTACAGAAGCT
      GTTGATAATATTCCGAAGTCTCAACAACTTCAAGGCGGTGGGACTAATGGTTTAAAGTTTTGCCAGGACTTCATAAGTTC
      ATACTACACTTTCTTTGACGATACCGAAGAGCGTTTCAAACTTAAGAAGTATTACGACGACCAAGCCATGTTCTCGCTTA
      GCGTGCCGGTACAACTAAATTATGTCTACGGCTACAAGCTGTACAACAGAAACCAGAAGCGCCAGCATTCCTCGTTTGCA
      CAAAACGCCAAGCTGCAAGTGGGTAGAGCTGCGCTACTTCTCGCTTTAAGCCGCTTGCCTTTGATGCTTACAGACTTAGA
      GAATGTCGGGCTAGACATCCAGGTGTTCACTTCGAGTCTACGCATCTTTACGTTGACGGGATACTTTAAGGAGATATCAT
      CGGATACTCTGGAACCACGACGCTTTCAGCGCACATTCGTATTGCAGACTTCCAATAGCCCCGGCTGGTTGATAACCAAC
      GACATGCTGTGCATAACTTCGACTATGCCGGACCCGAAAAAAACCATTAAATTTAAACCAGAAACTAATATGATAAATAC
      CGACCCGTCGGTAGAAAAAATAAATAAACCTGCAGTGACAGTTTTAGACAGAAAGTCTAAAGAGGATGTCCAAATTTCTA
      GACCCCTATCAGGAAAAGAGCTGAATCCTCTTAATAAGGCAGTGCAGAAAATGAGCCTTTCCCAGGTGGACCATCTTCCC
      AGTGAGAACTTCAACGATATGCCACCATTAGTAGCCATTGGTCCATTGACTACCGGGCAAAATTGTTTGGACTATGAAAT
      GGAGGATATTTTAGTGGCCGATGAGAATAACTTTGACTTGGACATTGATGATGACATCCTGTTTGGATGCGATGACCTTT
      AAATATGAACAAAAAAAATTAAACAATTCAAACAAATAGCTTTTAGAAACCTTGCACCTATCGGTTAAGACACCATACAT
      TACTATTCATTACTTTAACGAGTGCAGAACTCAAGGATCTAATTTATTTTTAAACTTTTATATTTTACGAAAGCCTTCAA
      AAACAATTCGAAAACCTTTACTCGCCCAAAGCGTCGGAATCTGGATTTCAGCCAAAATGGAGCGGGAAATGACAGCGGTG
      TTGGAACCGGGGCGGTCGCGGGTGCCCCAGCAATGCTTCAGCTGGAAATTGGCGGTCTTGTCACGACGAATATGCACAAA
      TCCTTCCTGCAAGACACCTCACCGCCGTCTTCCATCTGCTCCTCCATGAACACTGAACGGATGAACAACTCGCTAATCAC
      CTCAGCAGACTTTACGAACTTGAACTTCCTTCAATCCACAATTGGTCTTGAGCAGGATCCAAACCTTACCACTACGCTTA
      CCAACCAGACAACTGATAACATGGGAATCGGCGGCAGCATAGGCGGATATACGCTCAGTGACATGATCCGGGATCGCAAG
      GCGCTGGAGTCGCTGACCATGTGTGAGGACGATGGGACTCTTATCAAAGACTCGCACATCGGGCAAATTGACGAAATATC
      GTTGACACTGAGCAAAACGGCTTCCGGCTGCAGCACAATGGACAACAGCACAGACAGTATGTCCATTCCCCTGGCCGCAG
      ATCGAACGATGCCCGTTGTGATGCCGGCAGTTTGTCCTGCCCTACAGCGTACCATGATTTTAGGGGAGGAGATGATCGGC
      GACACAACTTTTAACCTCGTGGATAGCCTTACAACTTCTGCGCTGCAATCAGAGTCTGAGTCTCTGCCAGTCGATGGAAA
      TGCGACATTCAAAAGACCCACTGCGAGTGCTACTACAGCGGACGAAACCCAGGTGCTAACAGGTAGGCAGATGAATACTA
      CCTTCACCGACGGTTGCAACACTCCTGAGGGCCGCTGTGAAACGCCCGAAAATATTGACAGGAAGCTGGCCTTGCTCACC
      ATGGAATCCTCCACACCACTTACAACAAACATGCGCTCCCACTGCTACCACAATAACAACAATAATAACAAGGCAGGATA
      TACCCCTACCCTAAAGGGAAGGGGAGATATGAACCTGTCCCCAATTGTTGGCGCAACACCGCAAAAACCTACTGGAACCG
      CACCAGGGCGATTAAACAACACCTTTGAGCCCGTGGCAAAAACAGCTCCGTTCAACGGCGAGAAGTTCGTGCTGGACACT
      ATGGAGCTCTTGGAGCAGATCGAACAGCCGCTGGATGGCACTTACAACCTGCAAATGTCTGAACAGCACAGGCAGATGCA
      ATGCGTCATGGACTTGGCTGAGGCGGAAGTGGAGATGCTGGCCCAGCAGGGCGACGAAGAGCAATTCGAGAATATGCTTG
      CCGAGCTGGGCAAAGTGAATACGCTAAACGAGGAGCAACTGAAGATGCAAAAGTCGCTAGATACCATCAAACGGCGCTTC
      CATAGAGATGAGGCGGAGGCAGAGGAGCGTGAAGAGGAATTGCAGCAGCCGGCAGCCGAAAAGGTGGACACCCCAGTTCT
      AAATCAGAGCCACTCCAGCAGCAACAGCAGCGGCGGTGGTGGCGAACGGCTGCTCAGTCGCCGAAGTCGTCTCTACGACG
      ATGTCAACCTTAGTGCAATGCACGGCAGTAATGGAAGTTCGACCAGCACCAACTCTGCCTCATTCATCGTCCAGCGTAGA
      GATATGCCACAAGTGGAGCAGCCTGCACCAGATCCTGATCCCGAACCAGCGGAAGAGCCTCCAAAGTCCCAGGTGACAGC
      AGAGACTGATCCGGCAAGCTATAAGCTGCCGGAGCGAAGAGAGCGGGATCGCGATCGCTTCAAGACCATTAAGATTTCGA
      AAGAAATGCGACTGCAGCCGGAAATTATTGTGCCTTGTATAGACGATGAACCACAGCAACTCGAGGACGAGCAAAAGCAA
      TTAGTAGAAGATGTTCGGTACGAAGAGGATCAGCGACAGGGTTCACCACCGGGTCGACTTTCTCGTCGAGATCAGACCAC
      AGCAATTAGCAACAACGCAGATGCTAGTGCGAGTAACTATCTGACCTACAAAAAACCCAAGGAAAAGAGCCTTATCCAAC
      GACGTCCGCAGCAGCAGGAAGCGCCTTTATCAGCCGAGCCAGCGCCTGCGTCGACTCTTCCCCAGCCGCGTTCCTTGTCC
      AGGCCTCGCTACATCAGTGGTCTTCAGAAGTTTACTACGGTGAGCAAGGCAACTTCAGCCGGAGCGGGACTAAACGCAAC
      TCCAGCCGCTGCTATGCCGACTACTGTTACAGTGCCGGCCAACGGTAACGGGGAGCTGAAGAGCCCTATGGGTATTAAAT
      CCAAATCGTTCCACAACTTGTCCTCCACAATGAGCGGCGTTGGCTCTGGAGCCCTGCCAAGACCTAGTTTGGGCGGTGGA
      CTGCGACGTCCCAGTACGCAGCCCAGCAAGCTTATGAGCGGATTGCGTGGACCAACTCAAGCCCAAGAGGATGACTCCGC
      TGTATTTAAAGTACCGAAATTGGTGAGTGGGCTGCGTGCTCCTGGCCTTGCCCCAAAACGAGCAGGAGCTAATGGTTTAG
      CTCGACCTTCGTCCGGATATTACAGTCTGAGTGTTAAGACGGCACCAGAGGCAGACACTCCTGAGAGCCTCTCCTCAGCC
      TCTTCGCGTGGCAGCCTCTATGGCCACAAGGACTCCGGTAGAACCGTTAACGGCGGAAATGTTCCTCAACAGAATCCACA
      GCAAACCTTCGACATGCAGGCGCTTACCTCTAAGCTGACCCAGGTGACTACGGGAGCGACCGGTATACCAAAGCCCTCGG
      GGTTGAGACCACCATCGCAAATAAAGCGTAGCGGTCTGCCGCGACCTTCCAGTATTGTTAGGCGCTGAGAGCTGATCACT
      TCCTCCGCCGCCGATTGTATGCATATGTCACACACCCGCCTGAACCGACTTTCCATGTTATCAGTAAAATAGTCTAAATC
      TAAAAAAAAAAAAAAAAAAAAAAAAAAA
      
      Library Information (1)
      Library: AT_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from adult male testes and seminal vesicles.

      Sample preparation

      Adult male testes and seminal vesicles were hand dissected from 0-3 day old non-isogenic Oregon-R males from a population cage.

      Protocol

      RNA was extracted from dissected testis and poly(A)+ selected twice (kindly provided by J. Pringle and M. Fuller). cDNA made using Stratagene ZAP-cDNA synthesis kit; oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; cDNA size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned directly into EcoRI/XhoI-digested pOTB7 plasmid. cDNAs were transformed into DH5-alpha strain (Gibco/BRL), or for AT121nn clones, into DH5-alpha TonA.

      Comment
      Reported As
      Symbol Synonyms
      References (1)
      Research paper (1)
      Stapleton et al., 2002, Genome Res. 12(8): 1294--1300
      The Drosophila Gene Collection: identification of putative full-length cDNAs for 70% of D. melanogaster genes. [FBrf0152058]
      External Crossreferences and Linkouts ( 1 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)