FB2026_03 , released September 17, 2026
Clone: Dmel\LD39940
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General Information
Symbol
Dmel\LD39940
Species
D. melanogaster
Name
LD39940
FlyBase ID
FBcl0168853
Feature type
Computed gene(s)
 
Collection Status
BDGP
Known Problems
none
FlyBase assessment
    Library
    LD_pOT2_cDNA
    • LD cDNA library of D. melanogaster, iso-1 strain, embryo (0-22 hr), pOT2 vector.
    Strain
      Vector
      Tissue Source
      Stage
      Tissue/Position (including subcellular localization)
      Reference
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      4,707
      NCBI
      Full Length sequence dataSequence Downloader
      TTTTCCGTCGCAAAAGCCTGTGCAGTGTTTTTCCGGTCTTCAACGGGACAATTCCCAAAAGTCGTAAGAAGTGAGAAATA
      GCTGCGGCTTCTAAAAGTGTTTGAGAACATTAAAAGAGTTTACGAGCAGCCCAAAAACTTTGGACTCGAAAGTGATTTGT
      GAAACACGTTAACTAAATAAAATCACTAGCATTGAATAGTGCCAAAAGATACATATCGGAGTTTTGTTTACCTCTGGCAC
      TACGACACTGAATGGCTTTGACATTGGCGGCACATTTGCATCCGGGCAGGTGTAAATATTCATTTCTGTAGCTGGCAAAG
      TTGCTGCCTGCTTTTAGCATAATTAAGCGCATCACAACGCCCCCGTCGCCGCCGCCCCTGACATTCGCAAAGGACTCGAG
      GTGGACAAAAAAAAACTTGGCCAGAGCCTTGAAACTTTGAAGAGCAGCCGCCAGTCAAAGCAGCTTTAAGGTCCTGTTTT
      GTATTTGCCCCTCACAACGGTAGGATCCGAAGGGCAGGCGAACTGCATGGATATCCCACCATGTAAGCACCTGATGTGGA
      ACAAAGCGGAGCGATGAGGCTTCGAAATCTGACCACCACTGCAGCATGTCCTTGTCGGAACGGAATACACCCAGCCATGG
      GCAGGGAGCGGGGGCAGGAGGTGGGTCAGGGGGATTGGCTAGTGGAATGCACCGCCAGCGACCGCCGGACGTGGAGGAGG
      CGCTCTCCTCCATGCTCTGGACGCCCTATGAGCGCACACCCCTGCCCAGCTCATCGGAGGAGGAGGCCGAAGAGGAGGAC
      GACGACGAACGGCTCAATCGCCAGCTGCGTAAGTCGCACAGCAGCTACGAGGCCTCGGCCTTGAACCACCCCCACCACGC
      CCACCTCCCGCTTTTCGCCCACCACCAGCAGGCGCTGGACAGCGGATCCGCCCTGCTTCTGCCCCCCGTGCCTTCGTTTC
      CCCCGTTTAGTTTAAGCGCCTTCGACGCGGCCATCGCCGGCTTCGATCCCCTGGCCAAGGTGAGCTTCTCCGCCAGCGGA
      GTGGGTGGCCGGCGGAACCGCTACTCGTTCCCCGCCTACCAGGGAAGCCCCACCCGCACATTAACTCAATGGTGCTCCTC
      GGCCGCTACTTCAATCAAGGAACCACCCTCCTACGACTCCTTGTACAACGCCTCCAGCTCCAAGATTGGAGCTCCACCTG
      CCACGTCTCTGATCCTCAAGACCAGCGGGGAAGTGGGAGTGGCTCTCGAACCATGTGATAGATCGCAACGATCGCCAACG
      AAAGCAGTAGCAGAGGATCAGAATCCGGATCGAGAAGGGGGTCAGGATCGGGATCTGGATGAGACTGAATCCAAGGCTGC
      ACCACTAACGGCTAATGTTCCCGCTGGCTTGGGTCTACGGCGCTCCTTTACGGATGACTACATTTCGCAGAATTGCGATC
      CATTCACGCCAGCAACTGCAACGCAGCACAACAGCAACACTGAGACAACGGCAACGGAAACACAAAGCCCAGCAACGAAT
      GCAAGATCACAACAAAGCGAGAAAAACCCAGGCAGCAGCGCAGCGAATTGCATTATCAATGAACAGAGAGATGAGGCAGC
      AACTGCAACAGCGACATCAGCAGCAGCAGCTGCAGCAGCGGCAGCAGGGGCAGGGAATGAGGAAACCAGCTCGGTGGCAG
      TGCAGGTCAGTCAACCTGTTTCCTGTACCGCCAGAGAGCGTAGAGAGCTGCTGAGAGCCAGCAACACGAACACGCCAGCG
      AGCAGCAGCAGCAGCACCAGCAGCGCCAGCAACATTAGCTACGCGAGCAACATCAGCGGCGAGCGCTCAGCGATCAGTCT
      CTCGGCAACTTTCGGCGGGCCAACGCTGTACAGCGCGAGCAGCAGCAACCGGAATTGCTACAACAGCAGCAGCAGCAGCA
      GCAACTATCGCCCACTGTACGACGATTCGAGTAGCAGCAGCGTGCTGCGGCCCAACAAATGTTTGGCAGAACTCGAGCGT
      CTCTATGCCGAATTTCGCGCGAGTGAAAGCAGATTCGAACGGGGTCTGATCCAGTGCCAGTTGGACATTGAAAACGCCAA
      CGCCACCGACACCGTTAGCGAAATGCGTCTAAATGTGCCAGCCACTGCGGCAGCAGACACTGTTGCTAGTTGTAGCAACA
      GCAACAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGTGTGTTCCTCAATGTGTCCGGCAGCAGCAGCACCGATAGC
      GGCGACAATCAAGTTGTCGATGAGGCTAGAAGCATTAGCAACATTGCTGTGCTGCCAGCAACAGCAACTGCAACAACAAC
      AACAGCCACTTCCAAGTCCTGCCAGCGACAGCCGAGCCTAACGATCCAAGTGAACAACAACAACAACAACAACAACAATA
      ACAACGGCAACACTAACGGTACTAGTAACGGCAATCGGGTCTCGGTGGCTTCGCCCACGAGCATTGTGAACAACAACAAC
      GGCGTGTGCGTTGTCAACTGCAGCTACACCCCCAGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCTG
      CATCAGCAACACCACCAACAGCAACATCAGCAACAATAACAGCGTGGTTGAAATCAATAAGTGTGTGCCAGCAGCAGCCA
      AAGTGTTTAGTGCAAGTGTTCAAAATCAAAATAGGCTCAATAATAATAGTAGCTGCCCAAAAGGGGATCAGCAACATGTT
      GCTGCTGCATCCACGGCCAGCAATAATAATCATGTGCAGCCTGATAACAGTGTGAATATAATCAGTGTGAATGCAAGCAG
      CAGCAGCTACAATAATAACCACCCACGCACCTTCACCTCAACGGAATGCCAAACGGATGATCTGTCAGCCAGTACATCAT
      CCAACATGCAACAGCAACACCAGCAGCAGCAGCAGCAGCAACAGATCCGGACACGGGAGCAACGTCGCAAGGAGCGGCGG
      GAACGCCGGCAGCAGCAACAGCAGCAACAGCAGCAACAACAGTTTCAGCCACACCATGCGCGACGCCACCCGCCCCCACC
      TCCTCCGCCACAACTACACCCACCACCGCATCTGCACCACCCACATCCCCACCCACTTCCCCACCCTCATCCGGCTGCCA
      TGGGACTGGCACGCGCTCTGTTGCCCGACATCCTGCACGCCCACTACCCGCCGCCCTATACTGCTCTGCCCGTGCCCGTG
      GCCATGTCCGCCGCTCCGCCACCGCCGCCCCCGTCGACTGCCGTTGCGGCATCTGCTGTTGCGGCGGCGGCACAGCAGCC
      AGCACATGCAAGTCCGGCTCCTCCGCCAGCGCTGACGTCCGTGATATCGACGGTGCCACTGCCGGGTCCGCTGCCAGCGC
      CTCTCATGAACGACGGACGCTTCACGCTGCCGCTGCCCATCATGCGCAGATCCCCCTCGGAGAGATCGGGCAAAGGCTGC
      TGTGGCCAGTGGTTTGCCGGACCGCCGCTGCGCGCCCTTATTGCCGTCGTCGCCCTGGGGGGCGTGGCCTGCGCCCTGGG
      CGGAGCGGCCTTGGGCGCCACAGGACTCGCCGGACCGCCCAACTCCCACCTCACGGCCGCCCTGTTAATGATTGGAGTTG
      GCGTCGTTTTGGTGACTGTAAGTGGCGCCGCCTGGCGAATGACGGCGCCGGGCGGCCAGAGCTGCCTGGGAATCGGCCTG
      GGCACCAGTGTGGACCTTGGACGGTGTGGCCGGAGGCCCTGCAGTCGCGGTGGCGGAGCACCGCACGGACTGCTCTATCC
      GGAGTTCCAGCACCGCCCACCGCCGCCCTCGTACCAGGCCAGCATGCAGGAGTACCGGCTGAGACTTTTGCTATTGGACC
      GCGATCGCCAGAATGGCGTGGTGCGTGGAAATTCGCCGCCGCCCACTTATCGATCTCATGCGGGCAGCCTGCTGAGGGCT
      CCACTGACCACCCTGAGATCCGGAATGGGCGGAGGATGCGGCGCCGGGGGAACAATCAGCAGCAGTATGGGCGGCTCCGA
      GTACAGTTTGCCGCCCAGCTACCGCTCCAGGAATGCCACGCCCGCCAATCTCGTATGCAGTGAGCGGAACATCGAGACGG
      CTCCGTCCGGTAGACTGCTGGCCAATGAGGATCTGCAGCTGCCGGAGCCGTCGGTGGTGGAGCAATTGCCGGACTACACG
      GCGCTGCAGTCGAACACGTTGCTTACCTCGGCCATCGTGGAGATAGAGTCATCCAATCGCATTCCGGAAAGGGAATCCAA
      TGCATCGAACGGTGCGGCGGCGATGAGCAAAAGCAAGGATCTGGTGACCATTGTGACTATATCCCAGTCACCCGGAAGCA
      CCCACAGCCAAACGCAAACTGAAACGCAAAATCCAGCTGGCCAGGCCAGCGCACTCGATCAGATCGATATATTGGCGCAT
      CTGTAGCGATCGAACTGAACGGTTGGATACATCAGATTCAGACACTCGTTAACCCAAAGGTATTTATTTGTACGGAACTC
      AAGCTGCTCCTAAATGAATGTAATGTAACCCCTATCTGTAACCTGTATCTGTAAGCGGCGTTAGCTGGTAAGATGTTTGT
      TGTACTTGAATGTGTTGAATTTATTTTTGTAAGCATTAAGCAGATGCGCAGCGTAGTTATTACGAATTCTAGATACTTGC
      AATTATACATATACGCCTACCCATTGAAGTATTAAAGTATCCAAAACGAAAAAAAAAAAAAAAAAAA
      
      Library Information (1)
      Library: LD_pOT2_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from 0-22-hour embryos.

      Sample preparation

      Embryos at 0-22 hr AEL were collected from an isogenic y; cn bw sp (iso-1) strain.

      Protocol

      RNA was poly(A)+ selected twice. cDNA made using Stratagene ZAP-cDNA synthesis kit; oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. For clones LD21101 and higher, cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid.

      Comment
      Reported As
      Symbol Synonyms
      LD_pOT2_cDNA
      References (1)
      Review (1)
      Rubin et al., 2000, Science 287(5461): 2222--2224
      A Drosophila complementary DNA resource. [FBrf0127297]
      External Crossreferences and Linkouts ( 2 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)