FB2026_03 , released September 17, 2026
Clone: Dmel\SD08161
Open Close
General Information
Symbol
Dmel\SD08161
Species
D. melanogaster
Name
SD08161
FlyBase ID
FBcl0278213
Feature type
Computed gene(s)
 
Collection Status
DGC gold BDGP
Known Problems
contains transposon sequences
FlyBase assessment
    Library
    SD_cDNA
    • SD cDNA library of D. melanogaster, Schneider's Line-2 cells.
    Strain
      Vector
      Tissue Source
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      2,863
      NCBI
      Full Length sequence dataSequence Downloader
      ATTTCGTAGCGAGCGGTTGAGTTTGTAGTATAACGGAATTTTCATAACCTTCGATAGATCGTAGAATGGCGATATTTTAG
      CTGGCAGTATACAAATCAGAAAAGAAAAAAAACGGATATTTTGATTGGCTTACGATTTGAAATATAAGTGGTAAATCCTT
      CTCTTTTGCAATGCCAAACCAGATGAGAGTGCTGGACTTTGGCGATGGATCGGTGCCCATCCAGCTGGACTATCCAGATT
      CGAAGATCTTCAGCAAGTGCAGTAGCTACGGCGATCGTGTTCCGGGTACCCATTGGAACGAAATCACAGTGCACCATAAG
      GGCCGCCTGGAATACTCGCCAAATCCGGAGCAGATAATCCTGGATGCCTTATACCAGGCGATAGACGGTGCGGACTTCTT
      TCCGGTGTTCTACCAGCGTGGGAAGAACATGGATACCATGCTGGTCAGGAACTGCAAGGCGGCCATTGATAAGCTCTTCA
      AACAGCGGCTGTCCATTAATCTGAAAGGAGGCGCCTCCATACCCATCAGTATTCAACTGGGCGTAGCCCAGTACCAAAGG
      CACCAGATAACTCCAACGTTCCACATCGCACGGGTGGTCACCAGACTGATGAAACAATTGATTCAAAGGGACGGTGTGGA
      TGGGCTACTTAATCTGGACAACTTTGGGAGTCATCCGGAGTTTAAAAACCTTGTGGTAAGCCTGGGCAATCCGAGCATCC
      TGATGAACGTGTGCCAGGTAATACACAATGATGACAATGAACGCTTTCGGCTGAACGGATTTATATTGTCTAACAACCGC
      ATTCGGGATATACGGCCCTTGACGCTACTCGCCAATGTGGACTACGCCCTGCTCGACTTAAGGGGTAACAAGATTAAGTC
      AGCCGAACGTTTGTGCCGCGCTCTAGAACAATTCCGGGCCAGAGAACTGCTTTTGGAGAACAACCCCATTGTAAAGATAT
      CCAACTTTCCGGCGAACATTAAATCGCTGGAGAGTAACTTCGAGTTGGTGGATGGAAAGCCTTTCAACATGCTGCACAAG
      ATCTTTTCTCCTCTGGATGTGGAGATCGATTTGGAAGTGGATGGTGCGCGGATTGATACAAATAACATGTGGAAGTTGCC
      CGAGTTTGAGAACAGCCAGCATTGGCATGCCTTTATGATACCCGATCCCAGTCATGAATTTAACCAGGAGGTGTTCTTTG
      ACTTCTTCTTTATTAGGCTCGATCCGACCCTGAGCAACTTTTATCCCTGCTACTACAAGTACATTAACACGGAGCACGTT
      TTCCTCGTGCGCAATTGCTTTGATCAGATTGCACACCTGGTAAACAATTGCAACCTCGAGATGACAATTCCGACCGGTGA
      TCGGATTTTTCGTTACTATCTGCGTATGAATGTGAGCACTGTCAAGCAGCATCATGTCGATCCGGAGGAGTGCATACAGA
      AAGCTGTCTCGCAATGTTATGTGGCACAGAACCGAATGCTTAACCTCGAACGGTTTCACTCCAGAGAATGTCTAAAGGAT
      GTGATGGTGTCACTAAGCTCGCCAAAGATTTTAACCTACGTACTGTCGGTAGCGTCGCGGAAGTTCATGACCACCTGTTC
      AGAGATCCGTTTGTGCCACAACAAGGTCCTTGTTCTGGATGGAGCCCATGTCCTTGGTATGATGGGGTGCCTGAGAGCGG
      TGGATCTCAGTCACAACTGGGTGCAGGATCTGTCAAGCATCCACAGTCTGGGCAACCTACCTCTGAAGTCCCTGGTACTT
      CACGGAAATAAACTCTGCCGCAACTACAGACTGCCCAGCGAATATGTCAGGGCGGTGAAGGAGGTGTTTCCACAGTTGAC
      CACCTTGGATGGTGTGGACCTGCAGACGAATCCTGGCCAGTCGTTGCAGAAGAACTTTCTTTGCGATACAGGTGCCTACG
      AGTTGGTGGGTGCCTTTCTTGAAAACTATCTCCGGGAGTTCGAAAACGATGAGTTTCGCCACAATCTGTACAAGTATTAC
      TCTGAAAACTCGATTTTTACTCTAACGTGCAACTACAACGTGGTTCAAAATCACCAGACTCCAAAGATATTGCAGCGTTT
      ATCAAAGTACAACAGGCATGCACGAAATCTGCGCAACAAGGACTATTCCAAGGCAAGCGATGGTGTGTTCTTTGGCTGTA
      CATATATTGTTGAAATACTTTTGCAACTGCCACGAGTCACCCACGACTTCCACTCCCTGCAGACGGACGTAATGCACTAC
      AATGGTAAGGGGGCGGTTATCTATGTTGCTGGTTTGCTACGGGATGAGCCACCTAGCACGAGGAACGGCCACGGGAGCAA
      AACGGACATCGGTGGCGTTCTTTTGGGCTTTAGCCGACAGTTTGTGGTCACGTTCGATGAGGCGAACTTGGGATTGGGAA
      AGAGAGCTCGTCGCCTAAAGATCGCCAACGAACGTCTACACATAACGAATCCATCGAAAACTGCAATACGAAATGCTTTC
      AGTGTAAATTTTCCGGATCCAAGTGAACGTCAGGCGGAAGAGGATTCCCTGGATGTGAAGGATCACAAGCTCCTGCTCTT
      TCAAGAGGTAACCGGCCTCATTTCCACTTGGGTCACATCGATTGTGGAGGAAGCCGATTGGGACTTTGAGCGAGCCCTTA
      AATTGTTTATTCAGAAGAATGCTGATCACGAAATCCCAGATCTAGCATTCGCCTAGAATATGTGATCTCTATATATGTGA
      TCATATACTTTTGTAAAATAAGTGGTGCTTTCAATACCTCTGTTTCCTCTTTCGTTATAAATACTGAACCTGTGTTGCGA
      ATTCGACATCCCAATAAAACTACCTTGAATTACCAATAAAAAGTAAAAAAAAAAAAAAAAAAA
      
      Library Information (1)
      Library: SD_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from cultured cells; cell line used was not derived the iso-1 sequenced strain.

      Sample preparation

      For the SD cDNA library, Schneider L2 cells were collected.

      Protocol

      RNA was poly(A)+ selected once. oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid. ~300,000 colonies were plated out and a mass plasmid DNA prep was done using Qiagen Plasmids containing the cDNA inserts were size selected on Sephacryl S-500 column in order to exclude plasmids with no insert. Early elutions were collected and transformed into DH5 alpha strain (Gibco/BRL).

      Comment
      Reported As
      Symbol Synonyms
      SD
      SD_cDNA
      References (1)
      Review (1)
      Rubin et al., 2000, Science 287(5461): 2222--2224
      A Drosophila complementary DNA resource. [FBrf0127297]
      External Crossreferences and Linkouts ( 2 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)