FB2026_03 , released September 17, 2026
Clone: Dmel\SD09476
Open Close
General Information
Symbol
Dmel\SD09476
Species
D. melanogaster
Name
SD09476
FlyBase ID
FBcl0284641
Feature type
Computed gene(s)
 
Collection Status
DGC gold BDGP
Known Problems
none
FlyBase assessment
    Library
    SD_cDNA
    • SD cDNA library of D. melanogaster, Schneider's Line-2 cells.
    Strain
      Vector
      Tissue Source
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      2,276
      NCBI
      Full Length sequence dataSequence Downloader
      CTCCGCCGCCGCGTGAAGTCAGATTTCTCCGAGCGCTCAAACGAACAGCACGCGACATTCGCCGGAAAAAAAAACGAGAA
      CCATAAGTTGTGGGAAATTCGCACAAGGGACAGAAGGAAGAAGAAGCAGCAGCAGACGAAAGGGACGAACGGCGAAGCAA
      AACAAATCGAGCGACGAATAGCGGTGTGCAACGAAATGAAGGTCTGCTGCATTGGCGCTGGTTATGTCGGCGGTCCGACC
      TGCGCGGTTATGGCGCTCAAATGCCCCGATATCGTGATAACTCTGGTGGACAAGAGCTCCGAGCGGATTGCCCAGTGGAA
      TTCGGATAAGTTGCCCATTTACGAGCCCGGCTTGGATGAGGTGGTGAAGAAGTGCCGCAATGTGAACCTCTTCTTCTCAA
      CGGACATCGAGACGGCCATCAAGGAGGCGGACCTCATCTTCATCTCGGTGAACACGCCCACAAAAACCTGCGGCAATGGC
      AAGGGCCGAGCGGCGGACCTCAAGTACGTGGAGAGCGCAGCGCGGATGATCGCCGAGATCGCGCAGTCCAACAAGATTGT
      GGTGGAGAAGAGCACGGTGCCCGTGCGGGCGGCGGAGAGCATCATGCACATACTGCGAGCGAACCAGAAGCCGGGCATCC
      ACTACGACATACTGTCCAATCCCGAGTTCCTCGCCGAGGGCACCGCCATCAATGACCTGCTAAATGCGGATCGTGTGCTG
      ATCGGCGGCGAGGAGACGCCCGAGGGCCACCAGGCGGTGGAGAAGCTGTCGTGGATCTACGAGCACTGGATACCCAAGCA
      GAACATACTCACGACGAACACGTGGAGCAGCGAGCTGTCTAAGCTGGCGGCCAACGCATTCCTCGCCCAGCGAATCTCCA
      GCATCAATTCGCTGTCGGCAGTGTGCGAGGCCACGGGCGCAGATGTTTCCGAGGTGGCGAGGGCCGTGGGTCTAGACTCT
      CGCATCGGTTCCAAGTTCCTGCAGGCGTCGGTGGGCTTCGGCGGCAGTTGCTTTCAGAAGGACATCCTCAATCTGATTTA
      CATCTGCGAGAACCTCAATCTGCCCGAGGTGGCCGCCTACTGGCAGCAGGTGATCGACATGAATGAGTACCAGAAGCGTC
      GATTCTCGCAGAAAATCATCGAGAGTCTGTTCAACACGGTGTCGGACAAGCGGATAGCGATCCTGGGCTTTGCCTTCAAG
      AAGAATACGGGCGATACGCGCGAAACAGCCGCCATTACCGTGTGCCAAACTCTGCTGGAGGAGGGCGCCGCGCTGGATAT
      CTACGATCCGAAGGTGGAACCCGAGCAGATCATCGATGACCTCACGCATCCCAGTGTCACGGAATCGCCGGAGAAGGTGA
      AGAAGGCGGTGCAGATCCACAGTGATCCGTACAGCGCAGTGCGTGCCACACATGCGTTGGTCATCTGCACGGAGTGGGAT
      GAGTTTGTTGATCTGGACTTTAAGCGCATATACCAATCGATGATGAAGCCAGCCTACATCTTCGACGGCCGCAAGATTCT
      CGACCACGAGCGCCTGCAGCAGATCGGCTTCCACGTCCAGACCATCGGCAAGAAGTACCAGCGCACCGGACTGCTCCGCT
      CGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCC
      AGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTA
      AGTTGAATCATGTTTAGGAGAATAGAATCGTTTCAAATCATCAGAGGACTCTGTCAGTTTTAAGTGAAAAGTAAAGTTGA
      ATTCTTGCATTTTGTATATTAGTTTCTAAAGGATATAAGCTTTTAAAACATTTCTGTATATAACTAGAAAGCGAATTACT
      TATTTGAACAACATAAGGCAATGATTGATTAACCACAAAGTTATAAAACGTAGCAACTATTTTTGATCAGACAATATACT
      ATTATGTAGCTTTCTTCATATCGACCCAAACTAACGAGTGTGTTTCTAAATAGTTAAAGTATTCAACTAGGCACACCCGC
      AAGGGAAACCCTCGAACCGTATTTGTATTCATATTCCTATACCTATTCCCCTATCGATCCGCCACTCGAGGATCGGTAGT
      TGCAATATTAAGCCCCAACAGGACAGTAATCCCCTCCTGCGGCGGGCCAATAAAAACCAGCATTTACACGAGAGCATGTA
      AATTTTTATAATAAAAATAAAAAAAAAAAAAAAAAA
      
      Library Information (1)
      Library: SD_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from cultured cells; cell line used was not derived the iso-1 sequenced strain.

      Sample preparation

      For the SD cDNA library, Schneider L2 cells were collected.

      Protocol

      RNA was poly(A)+ selected once. oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid. ~300,000 colonies were plated out and a mass plasmid DNA prep was done using Qiagen Plasmids containing the cDNA inserts were size selected on Sephacryl S-500 column in order to exclude plasmids with no insert. Early elutions were collected and transformed into DH5 alpha strain (Gibco/BRL).

      Comment
      Reported As
      Symbol Synonyms
      SD
      SD_cDNA
      References (1)
      Review (1)
      Rubin et al., 2000, Science 287(5461): 2222--2224
      A Drosophila complementary DNA resource. [FBrf0127297]
      External Crossreferences and Linkouts ( 2 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)