FB2026_02 , released June 18, 2026
Clone: Dmel\SD05642
Some tools are temporarily unavailable. We are completing maintenance and working to restore these tools as soon as possible. Thank you for your patience.
Open Close
General Information
Symbol
Dmel\SD05642
Species
D. melanogaster
Name
SD05642
FlyBase ID
FBcl0289647
Feature type
Computed gene(s)
 
Collection Status
BDGP
Known Problems
none
FlyBase assessment
  • Caution: This cDNA clone replaced by FI05482
Library
SD_cDNA
  • SD cDNA library of D. melanogaster, Schneider's Line-2 cells.
Strain
    Vector
    Tissue Source
    Sequence Data of the Insert
    Full Length Sequence
    Total bases
    3,759
    NCBI
    Full Length sequence dataSequence Downloader
    TGGAATCTGTGTGTAAACAACGCACCTGCATTTAGGAATTTCTACCAACTATGCAGGATTAGCCAATTCGACTTCTGCAA
    CAATGAGGGGTGTTCTCAAGTGGCTGGAACGCATAGAGTTTCCCAATAGCAAAGACAATGAGATCAGTGTCCACAATGTG
    TGCTACGCACCCGATGGCAGCCAATTGGTGGTGGCTGCGGGGGATCGGTTGCTCATCTACGATCCAAACGATGGCTCCTT
    GCTGAACACCTTGAAGGCGCACAAGGATACGGTCAATTGTGTGGCCTACTCGCGGGATGGCAAGCGGTTCGCCAGCGGAG
    CCTCCGATAAAATGGTCATCGTGTGGTCACCTCAGCTTGAGGGACTGCTCAAGTATTCGCACGGTGACTCCATACAGTGC
    ATGAGCTTCAATCCTGTTTCGCACCACCTGGCCTCGTGCTCCTTGTCGGATTTTGCCTTTTGGTCGGCTGATCAGAAGGC
    GGTGCAAAAGTACAAGATATCCGCGCGTGTCAATGGCTGCTCGTGGACCAATGATGGACAGTACCTGATCCTGGGCCTGG
    CCAATGGCACCATATCCATTAGGAACAAGTTGGGCGAGGAGAAGGGGAGAATCGATCGGCCTGGTGGGCCCAACAGCAAC
    GTCTTCAGTGTCCAATGTTGTCCGGCCAGCGGTCCTGGCAGTGTGGACACCATCGGTGTGGTGGACTGGAGCCAAACGCT
    ATCCTTTCACACTCTGAGCGGCCAGATGATTGGCAAGGAGCGAACCCTGGGCTTTGATCCCTTGTGCCTGCAGTACTTTC
    CCAATGGGGAGTTCTGCCTGGTGGGCGGCTGCACTGGAGGTCTACACTTCTTCACCAGGGAGGGCATTCGGCTGGGTACG
    TTGGGCGATACCTTTGACACCTGGATCTGGACAGTTGCCCTACATCCCAATGGTCAATCCTACACCATTGGGTGTCAAGA
    TGGAACCCTGGCCTGCTTCAACATTGCGTCTAGTACCGTGCATGCCCTCTACCGCGAGCGCTATGCCTTCCGGGAAAACA
    TGTGCGACGTGATCATTCAGCACCTGATCTCTGGCCAAAAGGTGCGCATCAAGTGTCGAGATTTAGTTCAGAAAATAGCC
    ATTTATCGGAATCGACTGGCGGTTCAGTTGCCGGAACGTGTGGTTCTCTATGAGCTGAGCTCTGGAGAGGATCAACCCAT
    GCACTATAAAGTGCGCGAGAAGATCCAGCAAAAGTTCGACTGCAGCTTGCTGGTTGTTTGTGGCCGTCACATTGTCCTGT
    GCCAGGAGAAGCGTCTCCAATGTCTGGATTTCATGGGTGTCCTGCAGCGCGAGTGGATCATGGACTCGTTCATAAGATAC
    ATCAAAGTCACCGGTGGCCCCGTGGGAAGAGAAGGACTAATGGTGGGCTTGAAGAACGGCCAAGTGTTCCGAATCTTTCT
    CAACAACTCACTACCACTGCTCATCACCACTGCGGTGTCAGCGGTTCGCTGCCTGGATATCAATTCGAAGCGCAGCAAGA
    TCGCAGTTGTGGACGATGTGGGTCGCTTGGTTGTGCGGGACGTAATCAACGATACAATTTTGTACCAGGATACGGGTGTA
    AACAGCGTCACTTGGAACACGCACCTGGATTCGATGCTCTGCTATACCCACACAACAGGCGGATTAAGCGTTCGCGTGGG
    GAATCTGCCGCCGAGGGCACCACAGAACATGCATGGCGTGGTGGTGGGGCTTTGCGGAGCCACTGCCTTCTGCCTGCGCG
    GAAATATTATGCACAATACGCCTTTGGCTCTCGGTTCCACCATGTGGCAGTTCATCGAAGCTGGATTGTTTGACGAAGCC
    TACCAGGTCGCCTGCCTGGGCGTGACCACCAGCGACTGGGAGGGATTAGCTCAATCCGCTCTGGAGGCACTGCACATAAA
    TATCGCTCGCGATGCCTACGTCAAGGTGAGGAATCTTCCGTGGCTCAAACTCATCGGTGAGCTACGAGATCAGCAACAGC
    GATCGGCGGTTCCTAAAGAGGTGCTTCTCGCAGAGAATTGCGCGTTTGCCGGCAAGTTCAAGGAGGCAGCTCGTCTATTT
    CTCAAATGCGGCCAGTCCTCAAGAGCACTTGAAATGTACACAGATCTACGTATGTTCGATTTAGCCCAGGAGTATATTAA
    GGACGGCACCGACCAGGAGAAGAAGGAACTGGTACGCAAGCGAGCGGAATGGGCATATTCGGTTAAGGAGCCACGAGCTG
    CTGCGGAACTATTGCTCTCAGCTGGCGAAAATCAGAAGGCCATTGATATTGTCGCAGAGCAAGGATGGGCCGATGTGCTT
    TACGATATCGGACGACGACTGAGTCTTACGGAACGCGATTCCCTGGAATCGGTGGCCCAGAACCTAAAGACCCTCAAAGC
    TCTTCCCCTGGCTGCTGAGATTTTCAAGAAGCTGGGCGATGAAGCCCAGGTGGTGCAACTGCACATCGAGGTACGCGACT
    GGCCGGAAGCATTTCGTTTGGCGGAATCGCTGCCGGAACTTTTGCCCACGGTGCACTACCAGCATGGGCAATGGCTGGCC
    GAAACGGATCAGTTTATAGAGGCGCATCAGGCCTACATAAAGGCAGGACGCACCAAGGAAGCCAATCGTTTGCTTAAGCA
    ACTGAGCAATACGGCCATCGTGGAGGAGCGCTACTTGGATGCGAGCTACTTTTATTGGCTGCTGGCCAAGCAACATTTAG
    ATGTATATCACGCCAAGGAAGAACAAAATCCTGTTGATCACCACCTTACGGAGTACAAAAATCATTTACGTGTTGCCAAG
    GTTTATTACGCCTACAGTGTCATATACTCATATATGAAAGAACCATTCACCACACATTCCCCAGTTAGCCTATTTAACGT
    AAGCCGCTTTATACTAAACGAAGTGGAGCAAAAAGGTGTCCCCAAAGGTGTCAGCATGTTTTCGGTTCTCTTCACTCTGG
    CCAAGCAAGCTAAGTTTTTGCAGGCCAACAAGTTATGCCTTCTTATTAACAAGAGACTGCAGTCGTTGAAGCCACCAGCT
    GGAGTCCAAGAGCAGATTGATCTAAATTTTTTAAATAGCAAGGCTTGCAAAAGTGGCTTCAATGATCCGGAGGAGCTTTT
    GCCACTTTGTTACAAGTGCTCCAACTACAGTCAACATTTGAATAGCAATTGCTGTCCCACTTGCCGGCAGGATTATATTT
    TCTCTTTCGTTTCCTTCGAAATTCTACCCCTAGTACAATTTTATCCAGAAGTGGATATATCTGATGCCGAGGCGGAGCGC
    TTGCTGCTGGCTCCTGCAAAGCACGCCGAGGATTCGGATCCATTTAACGAGGATGTGGCCAGTGCATTGCCTTTGAGCTT
    GGATCGCAATGGCCTGCGTGCCATAGATCCCAATCATGTGCTGATTCTTAAACGGAGAGGAAAGAATGTGCGGAATGTGT
    ACTATCGTAATATATTACCCGATCTTCAGGTTACCTATTGTCCTCAATGTCTGCTGCTTTTCTATGCGGAGGACTTTGAG
    CTGCAAGTGCTGCAAAAAGGTCACTGTCCCTTTTGTCACACATCCTCCGAAAAGCTGATGGAAGACTTTTGAAATCGACA
    TAAGAAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTATACGCAAATAAATACGGTGTTACGC
    CCAGGTTTCCTCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    
    Library Information (1)
    Library: SD_cDNA
    Description

    Cloned cDNAs prepared from polyadenylated RNA isolated from cultured cells; cell line used was not derived the iso-1 sequenced strain.

    Sample preparation

    For the SD cDNA library, Schneider L2 cells were collected.

    Protocol

    RNA was poly(A)+ selected once. oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid. ~300,000 colonies were plated out and a mass plasmid DNA prep was done using Qiagen Plasmids containing the cDNA inserts were size selected on Sephacryl S-500 column in order to exclude plasmids with no insert. Early elutions were collected and transformed into DH5 alpha strain (Gibco/BRL).

    Comment
    Reported As
    Symbol Synonyms
    SD
    SD_cDNA
    References (1)
    Review (1)
    Rubin et al., 2000, Science 287(5461): 2222--2224
    A Drosophila complementary DNA resource. [FBrf0127297]
    External Crossreferences and Linkouts ( 2 )
    Linkouts
    DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
    Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
    Synonyms and Secondary IDs (0)
    Reported As
    Symbol Synonym
    Secondary FlyBase IDs
      References (0)