FB2026_02 , released June 18, 2026
Clone: Dmel\CH322-78D7
Some tools are temporarily unavailable. We are completing maintenance and working to restore these tools as soon as possible. Thank you for your patience.
Open Close
General Information
Symbol
Dmel\CH322-78D7
Species
D. melanogaster
Name
CH322-78D7
FlyBase ID
FBcl0788824
Feature type
genomic_clone
Computed gene(s)
 
Collection Status
N/A
Known Problems
none
FlyBase assessment
    Library
    CHORI-322_BAC
    • Pacman genomic clone collection for D. melanogaster, iso-1 strain, adult, 21kb inserts.
    Strain
      Vector
      Tissue Source
      Stage
      Tissue/Position (including subcellular localization)
      Reference
      adult stage
      organism
      (Venken et al., 2009)
      Sequence Data of the Insert
      Full Length Sequence
      Genomic Location
      3R:1,163,002..1,179,189 [+]
      Total bases
      16,188
      NCBI
      Full Length sequence dataSequence Downloader
      Left End Sequence
      Total bases
      572
      NCBI
      FI481867
      Left End sequence data
      GATCCATATCATCCTACTTTCGAGGTGGCAATCGACATAGGTACGGTATTAAAAGTAAATTCAGAGAAGTCAACTAAGCG
AATTCACTGTTTCCGCAAGGCAAATTTTCTACGGCTAAACAATTTTATAGCTGACTTTAATTGGAACGATCTTTACTCCT
GCAACATTATGTCGAATGCGGTTAATATGTGTTATACCGCAATTAAATCATTGTGTTCCGATGTACTATCCGTCAATCTC
TAAACATCCTTGGTTTAATAAAGAGTGGTCACACCTAAGAAATGTAAAGTCCAGACTTTATACAAAATTAAAAAATAAAA
ATTAAACATTACCGTGCTTAATGCTCAGTGCTACAGGAATTATTTAAGCCGTTGTAAGTACCAGTTCGCACAGGATCCGA
AACAGTTTTACAATTTCGTTGACACTAATCGAAAAACAATTTCTTACTCTTCTTCGCTTTTTTTGAAAACACTACGGTAA
CCATCGAATCAGGCAATAGCCGATCTATTCGCCAAGTTTTTTCAAACAACATATTCTTACGTTACCTCATTCCGAACAGC
CATACTCTTATG
      Right End Sequence
      Total bases
      492
      NCBI
      FI481868
      Right End sequence data
      GATCATAGCCTTGTGAAGTATAGCGGTGAAGAGATGAAAATCCCCATCTATGGCGTTGACCTTCCCAATAACGTCATTTA
GTTGCTGGAGCGACTGGTGTGTTGCGTCGAATAGCCTAGTGTTGATCCGTATTTGCTGATCATTGTTCCTGGCTAGATTA
TCCTGAGAGTTCAAAATAGCGTCCCAGTCTGCTGCATCTGGCGAGCCTGCTATCCATTTCCAGGCGGAGCCCAACCAATT
GATGGCCCGACGGTTCCGATGCGGTGAGCCGGTCAGCCGGACGAGACCCTCTGTTGCTTCCTGCAGATAGTGAGTCGTTA
TGGTGGTGATTCGTTGGTCGTTGATCATAGCCGCTTCTCCTTGAGTGGCCTAGACGATTCGTTGCATCCCTTTCAAATCG
ATGAAATTCGCCAACTTGAAGACCCCGGTTACTCTCCATACGTTGCCTCTTTGTAGTGGGACGACAGGTGAATCGTACTT
TGATTATGTGGAT
      Library Information (1)
      Library: CHORI-322_BAC
      Description

      A BAC library containing genomic DNA fragments (average size of 21 kb) in the attB-P[acman]-CmR-BW vector for efficient transgenesis.

      (Venken et al., 2009)
      Sample preparation
      Protocol

      DNA isolated from adult fly tissue was prepared in agarose blocks and partially digested with MboI. 20-25 kb fragments were size-selected by contour-clamped homogeneous electric field (CHEF) gel electrophoresis, and ligated into the BamHi site of the attB-P[acman]-CmR-BW vector, a special adaptation of the P[acman] vector. Libraries were transformed into the E.coli strain "EPI300-T1R".

      (Venken et al., 2009)
      Comment

      A total of 73,728 clones were generated.

      (Venken et al., 2009)
      Reported As
      Symbol Synonyms
      CHORI-322
      (Venken et al., 2009)
      CHORI-322_BAC
      References (3)
      Research paper (2)
      Venken et al., 2010, Genetics 186(4): 1111--1125
      A molecularly defined duplication set for the X chromosome of Drosophila melanogaster. [FBrf0212670]
      Venken et al., 2009, Nat. Methods 6(6): 431--434
      Versatile P[acman] BAC libraries for transgenesis studies in Drosophila melanogaster. [FBrf0209231]
      Personal communication to FlyBase (1)
      GenetiVision Corporation, 2016-, A collection of transgenic flies carrying duplications that tile the autosomal portion of the Drosophila melanogaster genome.
      A collection of transgenic flies carrying duplications that tile the autosomal portion of the Drosophila melanogaster genome. [FBrf0232631]
      External Crossreferences and Linkouts ( 1 )
      Linkouts
      PACMANFLY - The source for information and resources of tools for the Drosophila community using the P[acman] recombineering technique.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      CH322-78D7
      Secondary FlyBase IDs
        References (1)